Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 8.7e-75 283.5 138 100.0
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 8.2e-49 197.2 98 96.9
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 7.0e-48 194.1 96 96.9
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 1.6e-47 193.0 98 94.9
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 2.0e-47 192.6 96 95.8
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 2.6e-42 175.6 97 86.6
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 3.4e-42 175.3 98 85.7
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 3.7e-41 171.8 95 86.3
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 3.7e-41 171.8 95 86.3
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 1.8e-40 169.5 95 84.2
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 7.0e-40 167.5 95 84.2
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 7.7e-39 164.1 95 80.0
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 2.1e-36 156.0 96 76.0
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 3.6e-36 155.2 95 76.8
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 6.1e-36 154.5 94 74.5
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 6.1e-36 154.5 94 76.6
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 8.0e-36 154.1 94 74.5
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 8.0e-36 154.1 96 72.9
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 2.3e-35 152.5 97 73.2
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 2.0e-34 149.4 96 74.0
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 2.0e-34 149.4 91 75.8
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 2.0e-34 149.4 90 77.8
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 3.4e-34 148.7 96 74.0
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 3.4e-34 148.7 98 70.4
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 3.4e-34 148.7 96 72.9
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 3.4e-34 148.7 94 74.5
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 3.4e-34 148.7 94 74.5
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 4.4e-34 148.3 94 72.3
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 4.4e-34 148.3 96 72.9
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 4.4e-34 148.3 96 70.8
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 4.4e-34 148.3 93 74.2
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 5.7e-34 147.9 88 77.3
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 7.5e-34 147.5 95 70.5
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 7.5e-34 147.5 95 71.6
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 7.5e-34 147.5 101 67.3
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 7.5e-34 147.5 90 72.2
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 1.7e-33 146.4 91 75.8
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 1.7e-33 146.4 92 70.7
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 2.2e-33 146.0 90 73.3
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.2e-33 146.0 94 71.3
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 2.2e-33 146.0 90 71.1
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 2.2e-33 146.0 94 70.2
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 2.8e-33 145.6 95 70.5
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 2.8e-33 145.6 96 71.9
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 2.8e-33 145.6 97 70.1
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 3.7e-33 145.2 90 73.3
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 3.7e-33 145.2 92 71.7
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 6.3e-33 144.4 92 69.6
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 1.1e-32 143.7 95 69.5
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 1.1e-32 143.7 91 72.5
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 1.1e-32 143.7 94 71.3
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 1.4e-32 143.3 96 68.8
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 1.8e-32 142.9 97 66.0
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 5.4e-32 141.4 110 62.7
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 5.4e-32 141.4 90 74.4
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 9.1e-32 140.6 91 70.3
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.2e-31 140.2 102 68.6
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.0e-31 139.4 98 69.4
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.0e-31 139.4 98 69.4
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.0e-31 139.4 98 69.4
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 2.0e-31 139.4 91 69.2
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 2.0e-31 139.4 93 69.9
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 3.5e-31 138.7 90 66.7
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 3.5e-31 138.7 93 68.8
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 4.5e-31 138.3 94 68.1
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 7.7e-31 137.5 97 64.9
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 7.7e-31 137.5 100 69.0
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 1.0e-30 137.1 90 70.0
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 1.0e-30 137.1 90 65.6
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 2.9e-30 135.6 114 57.0
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 2.9e-30 135.6 108 58.3
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 2.9e-30 135.6 108 58.3
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 2.9e-30 135.6 109 59.6
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 2.9e-30 135.6 90 66.7
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 3.8e-30 135.2 92 65.2
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 3.8e-30 135.2 96 66.7
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 5.0e-30 134.8 114 56.1
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 5.0e-30 134.8 91 67.0
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 5.0e-30 134.8 91 67.0
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 6.6e-30 134.4 90 66.7
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 1.5e-29 133.3 108 57.4
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 1.9e-29 132.9 92 64.1
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 3.3e-29 132.1 108 58.3
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 7.2e-29 131.0 114 57.0
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 9.5e-29 130.6 98 67.3
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 2.1e-28 129.4 129 52.7
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 2.8e-28 129.0 92 60.9
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 3.6e-28 128.6 95 66.3
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 6.1e-28 127.9 123 54.5
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 6.1e-28 127.9 93 66.7
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 8.0e-28 127.5 102 63.7
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 2.6e-26 122.5 82 68.3
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 4.4e-26 121.7 131 50.4
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 5.7e-26 121.3 88 63.6
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 7.5e-26 120.9 111 56.8
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 9.8e-26 120.6 91 63.7
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.3e-25 120.2 82 67.1
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 6.3e-25 117.9 91 62.6
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 1.4e-24 116.7 92 57.6
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 2.0e-18 96.3 94 51.1
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 3.7e-17 92.0 109 47.7
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 5.4e-16 88.2 103 43.7
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 2.7e-15 85.9 94 44.7
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 1.3e-06 57.0 33 78.8


User provided reference genes

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