Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 1.1e-101 373.2 183 100.0
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 6.4e-49 198.0 91 100.0
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 2.1e-47 193.0 93 97.8
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-42 177.2 85 96.5
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 3.9e-38 162.2 91 85.7
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 8.7e-38 161.0 91 85.7
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 3.3e-37 159.1 114 70.2
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 4.3e-37 158.7 92 84.8
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 4.3e-37 158.7 92 84.8
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 4.3e-37 158.7 92 84.8
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 5.6e-37 158.3 114 69.3
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 5.6e-37 158.3 114 70.2
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 9.6e-37 157.5 91 83.5
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 3.6e-36 155.6 92 83.7
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 8.1e-36 154.5 153 59.5
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.4e-35 153.7 114 67.5
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 4.0e-35 152.1 105 72.4
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 4.0e-35 152.1 91 80.2
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 3.8e-33 145.6 126 62.7
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 5.4e-32 141.7 91 72.5
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 9.3e-32 141.0 122 62.3
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 3.5e-31 139.0 93 73.1
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 7.9e-31 137.9 92 73.9
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 7.9e-31 137.9 92 75.0
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 1.0e-30 137.5 92 72.8
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 2.3e-30 136.3 92 70.7
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 2.3e-30 136.3 92 70.7
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 5.1e-30 135.2 92 71.7
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 5.1e-30 135.2 92 70.7
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 5.1e-30 135.2 92 72.8
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 1.1e-29 134.0 92 73.9
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 1.1e-29 134.0 92 71.7
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.1e-29 134.0 92 71.7
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 1.1e-29 134.0 101 67.3
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 1.5e-29 133.7 93 72.0
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 2.5e-29 132.9 93 69.9
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.5e-29 132.9 92 71.7
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 4.3e-29 132.1 110 60.9
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 5.6e-29 131.7 90 71.1
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.4e-29 131.3 92 69.6
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 7.4e-29 131.3 93 68.8
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 7.4e-29 131.3 93 68.8
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 9.6e-29 131.0 92 67.4
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 9.6e-29 131.0 92 67.4
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 9.6e-29 131.0 92 71.7
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 1.3e-28 130.6 92 69.6
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 1.3e-28 130.6 92 70.7
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 1.6e-28 130.2 92 69.6
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 1.6e-28 130.2 92 71.7
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 2.8e-28 129.4 92 69.6
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 3.7e-28 129.0 92 68.5
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 4.8e-28 128.6 84 69.0
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 4.8e-28 128.6 92 69.6
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 4.8e-28 128.6 92 65.2
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 6.2e-28 128.3 92 68.5
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 8.1e-28 127.9 149 49.7
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 1.1e-27 127.5 92 65.2
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 1.4e-27 127.1 92 67.4
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 1.4e-27 127.1 92 67.4
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 1.8e-27 126.7 95 65.3
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 1.8e-27 126.7 92 66.3
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 2.4e-27 126.3 92 67.4
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 3.1e-27 125.9 92 67.4
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 3.1e-27 125.9 92 67.4
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 3.1e-27 125.9 92 66.3
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 4.0e-27 125.6 92 67.4
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 4.0e-27 125.6 91 69.2
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 4.0e-27 125.6 148 49.3
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 5.3e-27 125.2 91 65.9
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 1.2e-26 124.0 93 64.5
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 1.5e-26 123.6 92 67.4
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 2.0e-26 123.2 91 64.8
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 2.0e-26 123.2 92 67.4
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 2.6e-26 122.9 92 65.2
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.6e-26 122.9 92 65.2
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 2.6e-26 122.9 92 64.1
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 2.6e-26 122.9 92 64.1
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 5.8e-26 121.7 92 66.3
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 9.9e-26 120.9 114 56.1
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 1.3e-25 120.6 116 54.3
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.9e-25 119.4 89 67.4
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 6.4e-25 118.2 73 75.3
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 1.1e-24 117.5 92 62.0
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 9.3e-24 114.4 125 50.4
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 2.1e-23 113.2 71 74.6
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 6.0e-23 111.7 92 62.0
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 6.0e-23 111.7 72 72.2
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 1.0e-22 110.9 72 70.8
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 1.5e-21 107.1 114 50.9
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.9e-21 106.7 124 49.2
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 4.3e-21 105.5 73 61.6
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 2.1e-20 103.2 72 68.1
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 1.4e-19 100.5 110 51.8
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 2.4e-19 99.8 106 50.0
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 2.6e-18 96.3 84 59.5
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 2.2e-17 93.2 68 72.1
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 3.2e-16 89.4 90 50.0
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 9.3e-16 87.8 64 68.8
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 1.6e-15 87.0 100 50.0
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 1.6e-15 87.0 90 48.9
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 1.6e-15 87.0 90 48.9
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.0e-14 84.3 106 49.1
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 1.3e-14 84.0 63 66.7
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 3.0e-14 82.8 45 75.6
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 4.3e-13 79.0 94 45.7
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 5.7e-13 78.6 46 73.9
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.3e-12 77.4 70 58.6
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 3.7e-12 75.9 56 66.1
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.4e-11 73.9 51 64.7
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 4.1e-11 72.4 110 39.1
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.3e-09 67.4 44 77.3
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 6.5e-09 65.1 91 40.7
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 1.0e-06 57.8 45 64.4
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 3.0e-06 56.2 63 47.6


User provided reference genes

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