Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 3.8e-128 461.5 223 100.0
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 2.9e-112 408.7 223 91.5
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 2.8e-99 365.5 252 76.6
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 6.3e-99 364.4 252 76.2
BolC7t45322H Brassica oleracea HOM05D007337 ORTHO05D004972 4.1e-74 282.0 139 98.6
BcaNung02867 Brassica carinata HOM05D007337 ORTHO05D004972 4.3e-63 245.4 129 93.8
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 6.2e-46 188.3 240 47.1
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 9.2e-42 174.5 249 41.4
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 9.2e-42 174.5 239 43.5
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 6.0e-41 171.8 253 45.8
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 6.6e-40 168.3 249 41.0
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 2.5e-39 166.4 243 41.2
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 2.5e-39 166.4 243 41.2
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 7.3e-39 164.9 241 44.0
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-38 164.1 251 39.0
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 2.1e-38 163.3 252 37.7
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 2.8e-38 162.9 254 39.8
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 2.8e-38 162.9 254 39.8
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 6.2e-38 161.8 249 38.6
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 8.1e-38 161.4 248 39.5
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-37 161.0 257 42.8
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-37 161.0 239 40.2
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-37 161.0 253 37.9
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 1.1e-37 161.0 253 37.9
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 1.4e-37 160.6 259 38.2
BraA03t14089Z Brassica rapa HOM05D007337 ORTHO05D004972 1.4e-37 160.6 258 42.6
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 2.4e-37 159.8 253 37.9
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 3.1e-37 159.5 250 38.8
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 4.0e-37 159.1 248 39.5
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 2.0e-36 156.8 248 42.3
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 2.0e-36 156.8 257 38.1
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.4e-36 156.0 261 37.5
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 3.4e-36 156.0 247 42.1
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 4.4e-36 155.6 248 39.9
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 7.6e-36 154.8 257 38.1
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 3.8e-35 152.5 238 40.3
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.9e-35 152.1 240 39.6
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 5.4e-34 148.7 285 34.4
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 9.3e-34 147.9 281 38.4
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 2.7e-33 146.4 237 39.2
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 6.0e-33 145.2 268 36.6
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 6.0e-33 145.2 221 41.2
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 7.8e-33 144.8 239 36.4
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 3.3e-31 139.4 205 42.0
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 7.3e-31 138.3 245 35.9
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.3e-30 137.5 220 39.1
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.3e-30 137.5 249 35.7
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 1.6e-30 137.1 245 35.5
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 1.6e-30 137.1 220 39.5
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 1.6e-30 137.1 259 36.7
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.6e-30 136.0 266 33.5
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 8.1e-30 134.8 218 39.4
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 1.8e-29 133.7 269 34.9
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 1.8e-29 133.7 248 35.1
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 1.8e-29 133.7 269 34.9
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.2e-28 131.0 270 32.6
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.2e-28 131.0 243 35.4
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 1.2e-28 131.0 262 35.1
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 1.5e-28 130.6 248 34.7
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 2.6e-28 129.8 248 34.7
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 2.6e-28 129.8 248 34.7
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 3.4e-28 129.4 255 34.9
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 3.4e-28 129.4 248 34.3
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 4.5e-28 129.0 231 39.4
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 4.5e-28 129.0 271 34.3
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 7.6e-28 128.3 242 35.1
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.3e-27 127.5 277 32.5
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-27 127.5 212 38.2
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 1.4e-26 124.0 266 33.1
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 4.2e-26 122.5 270 31.9
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-25 120.9 235 36.2
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 2.1e-25 120.2 239 33.9
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 2.1e-25 120.2 239 33.9
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 1.3e-24 117.5 269 32.3
BolC2t05997H Brassica oleracea HOM05D007337 ORTHO05D004972 1.8e-24 117.1 158 44.3
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 2.3e-24 116.7 235 35.7
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 3.9e-24 115.9 234 34.6
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 3.9e-24 115.9 234 34.6
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 8.7e-24 114.8 272 30.9
BolC4t21835H Brassica oleracea HOM05D007337 ORTHO05D004972 1.9e-23 113.6 252 32.9
BolC4t21837H Brassica oleracea HOM05D007337 ORTHO05D004972 1.9e-23 113.6 252 32.9
BolC4t21838H Brassica oleracea HOM05D007337 ORTHO05D004972 1.9e-23 113.6 252 32.9
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 2.8e-22 109.8 235 35.3
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 4.0e-21 105.9 235 34.0
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 7.6e-20 101.7 246 29.3
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 9.9e-20 101.3 246 28.9
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.3e-19 100.9 261 29.9
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.8e-19 99.4 263 30.8
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 4.9e-19 99.0 243 28.0
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 1.1e-18 97.8 242 27.3
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 1.9e-18 97.1 248 28.6
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.2e-18 95.9 238 31.9
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 7.1e-18 95.1 256 26.6
QL12p012450 Quercus lobata HOM05D007337 ORTHO05D004972 6.0e-17 92.0 242 27.7
BolC7t45323H Brassica oleracea HOM05D007337 ORTHO05D004972 1.3e-16 90.9 63 76.2
BraA02t08071Z Brassica rapa HOM05D008086 ORTHO05D004972 1.3e-16 90.9 236 31.8
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 1.8e-16 90.5 251 26.3
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 1.8e-16 90.5 244 26.6
BcaC09g50367 Brassica carinata HOM05D007337 ORTHO05D004972 1.8e-16 90.5 165 36.4
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 2.3e-16 90.1 248 27.0
THA.LOC104798375 Tarenaya hassleriana HOM05D008086 ORTHO05D004972 2.3e-16 90.1 203 29.1
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 3.0e-16 89.7 244 27.0
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 3.0e-16 89.7 244 27.0
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 5.1e-16 89.0 251 25.9
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 5.1e-16 89.0 246 27.2
Carub.0007s2492 Capsella rubella HOM05D007337 ORTHO05D004972 8.7e-16 88.2 98 46.9
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.5e-15 87.4 252 26.2
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 1.9e-15 87.0 240 29.2
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 1.9e-15 87.0 249 27.3
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 1.9e-15 87.0 219 28.3
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 1.9e-15 87.0 249 27.3
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 3.3e-15 86.3 162 31.5
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 3.3e-15 86.3 238 26.5
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 4.3e-15 85.9 248 27.0
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 5.6e-15 85.5 212 29.2
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 1.3e-14 84.3 247 28.7
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 1.3e-14 84.3 247 28.7
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 1.3e-14 84.3 247 28.7
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 1.6e-14 84.0 252 26.6
CARHR215530 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.6e-14 84.0 88 48.9
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 2.1e-14 83.6 248 28.2
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 2.1e-14 83.6 247 27.1
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 2.8e-14 83.2 183 30.1
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 6.2e-14 82.0 219 26.0
BcaNung00180 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-13 81.3 61 62.3
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 1.8e-13 80.5 258 26.0
QL12p012461 Quercus lobata HOM05D008086 ORTHO05D004972 2.4e-13 80.1 239 26.8
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 3.1e-13 79.7 252 28.2
BraA03t14092Z Brassica rapa HOM05D007337 ORTHO05D004972 3.1e-13 79.7 91 49.5
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 4.0e-13 79.3 237 26.2
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 4.0e-13 79.3 248 28.2
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 4.0e-13 79.3 247 28.3
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 4.0e-13 79.3 248 28.2
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 5.3e-13 79.0 251 28.3
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 1.5e-12 77.4 203 27.6
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 2.6e-12 76.6 220 26.8
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 3.4e-12 76.3 242 27.3
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 4.5e-12 75.9 109 36.7
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 4.5e-12 75.9 129 34.9
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 7.6e-12 75.1 221 27.6
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 1.0e-11 74.7 247 26.3
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 1.7e-11 73.9 206 28.2
CARHR222970 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.7e-11 73.9 108 37.0
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 2.2e-11 73.6 259 26.3
AT5G47590 Arabidopsis thaliana HOM05D008086 ORTHO05D004972 3.2e-10 69.7 115 32.2
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 3.2e-10 69.7 189 30.2
Thecc.03G253000 Theobroma cacao HOM05D008086 ORTHO05D004972 7.1e-10 68.6 101 35.6
BraA02t08035Z Brassica rapa HOM05D008086 ORTHO05D004972 2.7e-09 66.6 232 25.4
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 1.8e-08 63.9 106 31.1
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 3.0e-08 63.2 115 30.4
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 3.3e-07 59.7 112 30.4
CARHR223010 Cardamine hirsuta HOM05D007337 ORTHO05D004972 3.3e-07 59.7 57 50.9
AT4G16555 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.1e-06 57.0 114 32.5
A06p45430 Brassica napus HOM05D008086 ORTHO05D004972 2.1e-06 57.0 169 25.4


User provided reference genes

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