Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 2.3e-142 508.8 247 100.0
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 2.4e-139 498.8 243 99.2
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 8.4e-129 463.8 243 94.7
BraA03t14089Z Brassica rapa HOM05D007337 ORTHO05D004972 7.1e-51 204.9 252 50.4
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 7.3e-48 194.9 247 49.4
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 1.8e-46 190.3 250 47.6
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 6.4e-44 181.8 256 44.9
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 1.9e-43 180.3 256 44.5
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 7.8e-42 174.9 278 41.7
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 3.3e-40 169.5 244 41.0
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 3.6e-39 166.0 205 48.8
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 3.6e-39 166.0 259 42.5
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 3.6e-39 166.0 259 42.5
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-38 164.5 257 42.8
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.8e-38 163.7 269 40.9
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.8e-38 163.7 238 44.5
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 2.4e-38 163.3 249 41.8
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 5.3e-38 162.2 257 42.8
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 5.8e-37 158.7 260 38.8
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 9.9e-37 157.9 260 39.6
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 4.9e-36 155.6 251 39.8
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 6.4e-36 155.2 246 41.5
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 6.4e-36 155.2 246 41.5
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-35 154.5 256 39.1
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 3.2e-35 152.9 253 37.9
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 3.2e-35 152.9 261 39.5
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 3.2e-35 152.9 266 38.0
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 4.2e-35 152.5 244 41.4
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 9.3e-35 151.4 254 37.8
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-34 151.0 254 37.8
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 1.2e-34 151.0 254 37.8
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.6e-34 150.6 270 37.4
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 2.1e-34 150.2 253 40.7
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 2.7e-34 149.8 245 37.1
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 2.7e-34 149.8 262 38.9
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 6.0e-34 148.7 266 37.2
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 1.3e-33 147.5 255 38.8
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.9e-33 146.0 268 35.1
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 8.7e-33 144.8 255 39.6
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.5e-32 144.1 239 40.6
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.9e-32 143.7 244 38.1
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 2.5e-32 143.3 257 39.7
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 3.3e-32 142.9 237 39.7
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 4.3e-32 142.5 284 35.6
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 6.2e-31 138.7 249 39.4
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-30 137.9 233 38.6
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 1.8e-30 137.1 235 36.6
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.8e-30 137.1 248 38.7
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 3.1e-30 136.3 250 36.0
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 3.1e-30 136.3 233 34.8
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 4.0e-30 136.0 274 35.8
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 5.3e-30 135.6 250 36.4
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 6.9e-30 135.2 273 34.8
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 9.0e-30 134.8 233 33.9
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-29 134.4 238 39.5
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 1.5e-29 134.0 233 33.9
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 1.5e-29 134.0 258 34.1
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 4.5e-29 132.5 241 33.2
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 4.5e-29 132.5 256 36.3
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 1.3e-28 131.0 233 33.5
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 1.7e-28 130.6 272 33.8
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 1.7e-28 130.6 272 33.8
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 2.2e-28 130.2 238 39.1
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.9e-28 129.8 245 37.6
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 6.4e-28 128.6 264 32.2
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 1.9e-27 127.1 234 33.8
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 1.9e-27 127.1 234 33.8
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.4e-27 126.7 234 38.5
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 3.2e-27 126.3 241 36.1
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 7.1e-27 125.2 224 38.8
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 6.0e-26 122.1 225 37.8
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 7.9e-26 121.7 234 36.8
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 7.9e-26 121.7 234 36.8
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 3.0e-25 119.8 237 38.0
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 5.1e-25 119.0 271 32.8
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 5.1e-25 119.0 284 30.6
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.5e-24 116.7 280 30.0
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 1.3e-23 114.4 272 32.0
BolC4t21835H Brassica oleracea HOM05D007337 ORTHO05D004972 2.1e-23 113.6 253 32.4
BolC4t21837H Brassica oleracea HOM05D007337 ORTHO05D004972 2.1e-23 113.6 253 32.4
BolC4t21838H Brassica oleracea HOM05D007337 ORTHO05D004972 2.1e-23 113.6 253 32.4
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 4.0e-22 109.4 223 37.7
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 7.6e-21 105.1 261 30.3
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 4.9e-20 102.4 248 30.6
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 2.5e-19 100.1 256 29.3
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 3.2e-19 99.8 248 31.0
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 4.2e-19 99.4 249 28.9
BolC2t05997H Brassica oleracea HOM05D007337 ORTHO05D004972 4.2e-19 99.4 175 40.0
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 9.3e-19 98.2 247 29.1
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 9.3e-19 98.2 247 29.1
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 9.3e-19 98.2 247 29.1
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 1.2e-18 97.8 249 30.5
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.1e-18 97.1 248 29.4
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.7e-18 96.7 264 26.5
THA.LOC104798375 Tarenaya hassleriana HOM05D008086 ORTHO05D004972 1.0e-17 94.7 238 29.4
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 5.1e-17 92.4 134 41.0
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 8.7e-17 91.7 242 30.2
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 1.5e-16 90.9 242 30.2
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 1.5e-16 90.9 113 44.2
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 1.5e-16 90.9 242 29.8
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 1.9e-16 90.5 206 32.5
BcaC09g50367 Brassica carinata HOM05D007337 ORTHO05D004972 3.3e-16 89.7 171 38.6
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 5.7e-16 89.0 238 27.3
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 7.4e-16 88.6 257 27.6
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 7.4e-16 88.6 256 28.5
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 7.4e-16 88.6 241 29.5
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 9.6e-16 88.2 205 31.7
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 9.6e-16 88.2 241 28.6
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.1e-15 87.0 251 28.7
BolC7t45322H Brassica oleracea HOM05D007337 ORTHO05D004972 2.8e-15 86.7 91 54.9
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 3.7e-15 86.3 256 28.1
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 4.8e-15 85.9 242 28.9
Carub.0007s2492 Capsella rubella HOM05D007337 ORTHO05D004972 4.8e-15 85.9 94 47.9
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 6.3e-15 85.5 252 27.4
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 8.2e-15 85.1 246 26.8
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 8.2e-15 85.1 214 30.4
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 8.2e-15 85.1 246 26.8
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 1.1e-14 84.7 202 29.7
BraA02t08071Z Brassica rapa HOM05D008086 ORTHO05D004972 1.4e-14 84.3 238 29.0
Thecc.03G253000 Theobroma cacao HOM05D008086 ORTHO05D004972 1.4e-14 84.3 129 36.4
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 1.8e-14 84.0 245 26.5
CARHR215530 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.8e-14 84.0 89 49.4
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 2.4e-14 83.6 226 29.2
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 2.4e-14 83.6 206 30.1
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 2.4e-14 83.6 243 28.8
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 2.4e-14 83.6 206 30.1
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 2.4e-14 83.6 238 29.0
QL12p012450 Quercus lobata HOM05D007337 ORTHO05D004972 3.1e-14 83.2 236 29.2
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 5.3e-14 82.4 248 26.6
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 9.0e-14 81.6 246 26.0
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 9.0e-14 81.6 252 25.0
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 1.5e-13 80.9 217 30.0
AT4G16540 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.0e-13 80.5 110 40.0
BraA03t14092Z Brassica rapa HOM05D007337 ORTHO05D004972 2.0e-13 80.5 92 50.0
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 2.6e-13 80.1 242 29.8
BcaNung00180 Brassica carinata HOM05D007337 ORTHO05D004972 3.4e-13 79.7 62 66.1
BcaNung02867 Brassica carinata HOM05D007337 ORTHO05D004972 3.4e-13 79.7 65 61.5
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 3.4e-13 79.7 205 29.3
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 4.5e-13 79.3 210 30.5
AT5G47590 Arabidopsis thaliana HOM05D008086 ORTHO05D004972 7.6e-13 78.6 104 38.5
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 1.3e-12 77.8 179 29.1
AT4G16555 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 2.2e-12 77.0 128 35.2
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 2.9e-12 76.6 249 26.5
CARHR223010 Cardamine hirsuta HOM05D007337 ORTHO05D004972 3.8e-12 76.3 74 51.4
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 6.5e-12 75.5 206 27.2
BolC7t45323H Brassica oleracea HOM05D007337 ORTHO05D004972 7.2e-11 72.0 91 49.5
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 1.2e-10 71.2 117 32.5
QL12p012461 Quercus lobata HOM05D008086 ORTHO05D004972 1.6e-10 70.9 244 27.0
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 3.5e-10 69.7 209 27.8
BraA02t08035Z Brassica rapa HOM05D008086 ORTHO05D004972 3.5e-10 69.7 253 25.3
CARHR222970 Cardamine hirsuta HOM05D007337 ORTHO05D004972 3.5e-10 69.7 106 38.7
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 4.6e-10 69.3 116 32.8
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 1.3e-09 67.8 117 31.6
BcaC06g34304 Brassica carinata HOM05D008086 ORTHO05D004972 3.0e-09 66.6 222 25.2
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 9.7e-08 61.6 177 27.1
C02p47660 Brassica napus HOM05D008086 ORTHO05D004972 4.8e-07 59.3 227 25.1
C02p48110 Brassica napus HOM05D008086 ORTHO05D004972 4.8e-07 59.3 195 27.7
A02p30190 Brassica napus HOM05D008086 ORTHO05D004972 5.3e-06 55.8 115 27.8


User provided reference genes

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