Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33305 Brassica carinata HOM05D009395 ORTHO05D011539 2.2e-106 389.8 350 100.0
C07p45790 Brassica napus HOM05D009395 ORTHO05D011539 2.2e-106 389.8 350 100.0
BolC7t45101H Brassica oleracea HOM05D009395 ORTHO05D011539 1.5e-99 367.1 350 96.3
BraA03t13892Z Brassica rapa HOM05D009395 ORTHO05D011539 1.6e-72 277.3 363 75.8
A03p47820 Brassica napus HOM05D009395 ORTHO05D011539 1.8e-71 273.9 353 82.2
BcaC06g33090 Brassica carinata HOM05D009395 ORTHO05D011539 3.1e-60 236.5 370 73.8
C01p29700 Brassica napus HOM05D009395 ORTHO05D011539 2.9e-50 203.4 359 69.9
BolC1t02911H Brassica oleracea HOM05D009395 ORTHO05D011539 2.9e-50 203.4 359 69.9
BcaC09g50038 Brassica carinata HOM05D009395 ORTHO05D011539 1.1e-49 201.4 359 69.9
BcaB05g23225 Brassica carinata HOM05D009395 ORTHO05D011539 1.0e-47 194.9 354 65.0
AL5G30730 Arabidopsis lyrata HOM05D009395 ORTHO05D011539 2.8e-45 186.8 348 56.6
Sp5g11630 Schrenkiella parvula HOM05D009395 ORTHO05D011539 3.7e-45 186.4 357 53.5
BraA01t02312Z Brassica rapa HOM05D009395 ORTHO05D011539 1.1e-44 184.9 351 63.5
A01p24020 Brassica napus HOM05D009395 ORTHO05D011539 3.8e-42 176.4 360 71.7
Carub.0005s1690 Capsella rubella HOM05D009395 ORTHO05D011539 2.6e-38 163.7 348 53.4
AT3G50580 Arabidopsis thaliana HOM05D009395 ORTHO05D011539 3.3e-38 163.3 353 46.2
CARHR160090 Cardamine hirsuta HOM05D009395 ORTHO05D011539 8.8e-31 138.7 346 41.3
AL1G52230 Arabidopsis lyrata HOM05D009395 ORTHO05D011539 9.8e-22 108.6 76 57.9
AT1G44191 Arabidopsis thaliana HOM05D009395 ORTHO05D011539 2.8e-21 107.1 76 56.6
Carub.0001s3513 Capsella rubella HOM05D009395 ORTHO05D011539 1.1e-20 105.1 73 57.5
Thhalv10011611m.g Eutrema salsugineum HOM05D009395 ORTHO05D011539 5.4e-20 102.8 72 55.6
CARHR035870 Cardamine hirsuta HOM05D009395 ORTHO05D011539 1.2e-19 101.7 72 55.6
Sp1g33470 Schrenkiella parvula HOM05D009395 ORTHO05D011539 1.2e-19 101.7 76 53.9
BcaC07g37300 Brassica carinata HOM05D009395 ORTHO05D011539 6.6e-18 95.9 72 52.8
C08p07340 Brassica napus HOM05D009395 ORTHO05D011539 6.6e-18 95.9 72 52.8
BolC8t47575H Brassica oleracea HOM05D009395 ORTHO05D011539 6.6e-18 95.9 72 52.8
BcaB04g17589 Brassica carinata HOM05D009395 ORTHO05D011539 7.2e-17 92.4 92 44.6
BraA08t32646Z Brassica rapa HOM05D009395 ORTHO05D011539 2.8e-16 90.5 362 47.8
Aa31LG7G15090 Aethionema arabicum HOM05D009395 ORTHO05D011539 8.0e-16 89.0 352 53.4
THA.LOC104806832 Tarenaya hassleriana HOM05D009395 ORTHO05D011539 5.6e-09 66.2 72 34.7
Aa31LG4G18750 Aethionema arabicum HOM05D009395 ORTHO05D011539 5.2e-07 59.7 47 53.2


User provided reference genes

Program Settings