Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 1.1e-79 300.1 173 100.0
Sp5g15320 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.3e-24 116.3 73 68.5
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.3e-24 116.3 146 42.5
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 1.4e-21 107.1 134 42.5
Sp1g34950 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.6e-20 102.8 101 50.5
BcaC06g35712 Brassica carinata HOM05D007693 ORTHO05D002086 5.9e-20 101.7 75 60.0
Sp6g12290 Schrenkiella parvula HOM05D007693 ORTHO05D002086 7.7e-20 101.3 84 54.8
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 1.0e-19 100.9 69 66.7
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 3.8e-19 99.0 69 65.2
Sp7g13130 Schrenkiella parvula HOM05D007693 ORTHO05D002086 5.0e-19 98.6 95 54.7
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 6.5e-19 98.2 77 58.4
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 1.1e-18 97.4 67 64.2
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-18 97.1 67 65.7
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-18 97.1 67 65.7
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 1.9e-18 96.7 104 44.2
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 4.2e-18 95.5 84 52.4
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 4.2e-18 95.5 84 52.4
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 5.5e-18 95.1 158 34.2
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 1.6e-17 93.6 73 56.2
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 1.6e-17 93.6 84 51.2
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 2.1e-17 93.2 73 56.2
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.7e-17 92.8 133 38.3
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.7e-17 92.8 133 38.3
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 2.7e-17 92.8 76 55.3
Sp5g21400 Schrenkiella parvula HOM05D018387 ORTHO05D002086 2.7e-17 92.8 89 49.4
BcaC03g15315 Brassica carinata HOM05D007693 ORTHO05D002086 3.6e-17 92.4 63 65.1
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 3.6e-17 92.4 59 64.4
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.7e-17 92.0 133 39.1
BcaB08g34442 Brassica carinata HOM05D007693 ORTHO05D002086 6.1e-17 91.7 73 58.9
BcaC02g11475 Brassica carinata HOM05D007693 ORTHO05D002086 1.8e-16 90.1 119 37.0
Thhalv10003362m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.8e-16 90.1 58 63.8
Thhalv10011039m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 4.0e-16 89.0 122 37.7
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 6.8e-16 88.2 58 60.3
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 1.2e-15 87.4 62 56.5
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 2.6e-15 86.3 62 56.5
BcaC08g44290 Brassica carinata HOM05D007693 ORTHO05D002086 2.6e-15 86.3 62 58.1
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 3.4e-15 85.9 61 59.0
BcaC01g00556 Brassica carinata HOM05D007693 ORTHO05D002086 7.5e-15 84.7 68 54.4
C05p36680 Brassica napus HOM05D007693 ORTHO05D002086 7.5e-15 84.7 92 44.6
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 7.5e-15 84.7 68 54.4
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 7.5e-15 84.7 68 54.4
BolC3t20530H Brassica oleracea HOM05D007693 ORTHO05D002086 9.8e-15 84.3 62 56.5
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.2e-14 83.2 62 58.1
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.2e-14 83.2 62 58.1
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 2.2e-14 83.2 60 63.3
BcaC05g28526 Brassica carinata HOM05D000977 ORTHO05D002086 2.8e-14 82.8 62 58.1
Sp6g08580 Schrenkiella parvula HOM05D018387 ORTHO05D002086 2.8e-14 82.8 89 44.9
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 3.7e-14 82.4 66 54.5
CARHR055980 Cardamine hirsuta HOM05D007693 ORTHO05D002086 6.3e-14 81.6 64 60.9
CARHR108830 Cardamine hirsuta HOM05D007693 ORTHO05D002086 8.3e-14 81.3 64 60.9
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 1.4e-13 80.5 62 56.5
BraA06t25204Z Brassica rapa HOM05D007693 ORTHO05D002086 5.4e-13 78.6 66 50.0
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 5.4e-13 78.6 62 56.5
BraA10t43661Z Brassica rapa HOM05D007693 ORTHO05D002086 7.0e-13 78.2 73 49.3
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 9.1e-13 77.8 129 33.3
Carub.0003s3077 Capsella rubella HOM05D007693 ORTHO05D002086 9.1e-13 77.8 130 36.2
BolC5t32402H Brassica oleracea HOM05D007693 ORTHO05D002086 1.2e-12 77.4 92 42.4
BcaC06g36209 Brassica carinata HOM05D000977 ORTHO05D002086 1.6e-12 77.0 62 54.8
Thhalv10003330m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.7e-12 76.3 62 53.2
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 4.5e-12 75.5 58 55.2
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 4.5e-12 75.5 76 48.7
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 4.5e-12 75.5 129 34.9
C05p48940 Brassica napus HOM05D007693 ORTHO05D002086 5.9e-12 75.1 107 41.1
BcaC06g36717 Brassica carinata HOM05D000977 ORTHO05D002086 7.7e-12 74.7 60 55.0
C09p24970 Brassica napus HOM05D007693 ORTHO05D002086 7.7e-12 74.7 59 55.9
AT2G07505 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 3.8e-11 72.4 62 53.2
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 3.8e-11 72.4 58 51.7
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 5.0e-11 72.0 57 54.4
BcaB04g18049 Brassica carinata HOM05D007693 ORTHO05D015462 5.0e-11 72.0 77 46.8
Sp7g12150 Schrenkiella parvula HOM05D007693 ORTHO05D002086 5.0e-11 72.0 129 34.1
Thhalv10002853m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 6.5e-11 71.6 63 49.2
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 1.1e-10 70.9 59 52.5
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 3.2e-10 69.3 59 50.8
THA.LOC104817596 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 4.2e-10 68.9 74 44.6
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 5.5e-10 68.6 55 50.9
BraA08t34216Z Brassica rapa HOM05D007693 ORTHO05D002086 7.2e-10 68.2 61 54.1
BcaB04g17442 Brassica carinata HOM05D007693 ORTHO05D002086 9.4e-10 67.8 60 50.0
BcaB06g26931 Brassica carinata HOM05D007693 ORTHO05D015462 9.4e-10 67.8 79 44.3
BraA07t28690Z Brassica rapa HOM05D007462 ORTHO05D002086 1.2e-09 67.4 70 44.3
Sp7g03170 Schrenkiella parvula HOM05D018387 ORTHO05D002086 2.7e-09 66.2 122 34.4
BolC8t49549H Brassica oleracea HOM05D007693 ORTHO05D002086 4.7e-09 65.5 39 66.7
BcaB07g33915 Brassica carinata HOM05D007693 ORTHO05D015462 6.1e-09 65.1 75 44.0
Sp6g09820 Schrenkiella parvula HOM05D007693 ORTHO05D002086 6.1e-09 65.1 54 57.4
Carub.0008s0706 Capsella rubella HOM05D007693 ORTHO05D002086 8.0e-09 64.7 61 44.3
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 1.0e-08 64.3 58 53.4
BcaC05g29515 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-08 63.9 59 47.5
BraA01t02729Z Brassica rapa HOM05D007462 ORTHO05D002086 1.4e-08 63.9 60 46.7
BcaB06g26738 Brassica carinata HOM05D007462 ORTHO05D002086 1.8e-08 63.5 54 51.9
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 1.8e-08 63.5 58 50.0
C04p58390 Brassica napus HOM05D007462 ORTHO05D002086 1.8e-08 63.5 54 51.9
BolC6t36760H Brassica oleracea HOM05D007462 ORTHO05D002086 1.8e-08 63.5 54 51.9
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 2.3e-08 63.2 58 51.7
BraA02t08314Z Brassica rapa HOM05D007462 ORTHO05D002086 2.3e-08 63.2 60 46.7
THA.LOC104818502 Tarenaya hassleriana HOM05D007693 ORTHO05D002086 2.3e-08 63.2 59 42.4
BraA05t20011Z Brassica rapa HOM05D007462 ORTHO05D002086 3.0e-08 62.8 56 50.0
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 4.0e-08 62.4 58 51.7
BcaC02g12212 Brassica carinata HOM05D000589 ORTHO05D001885 4.0e-08 62.4 63 44.4
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 4.0e-08 62.4 58 51.7
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 4.0e-08 62.4 58 51.7
BcaC08g44171 Brassica carinata HOM05D007462 ORTHO05D002086 4.0e-08 62.4 54 50.0
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 4.0e-08 62.4 63 44.4
BolC4t27363H Brassica oleracea HOM05D007462 ORTHO05D002086 4.0e-08 62.4 54 50.0
BcaB04g17468 Brassica carinata HOM05D007462 ORTHO05D011074 5.2e-08 62.0 63 49.2
BcaB04g17689 Brassica carinata HOM05D007462 ORTHO05D002086 5.2e-08 62.0 54 51.9
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 5.2e-08 62.0 58 51.7
BraA01t02125Z Brassica rapa HOM05D007462 ORTHO05D002086 5.2e-08 62.0 57 50.9
BcaC05g27596 Brassica carinata HOM05D000675 ORTHO05D002086 6.8e-08 61.6 80 40.0
BcaC06g33699 Brassica carinata HOM05D007462 ORTHO05D011074 6.8e-08 61.6 58 50.0
BcaC03g14143 Brassica carinata HOM05D007462 ORTHO05D011074 8.8e-08 61.2 58 50.0
BcaB05g24191 Brassica carinata HOM05D000675 ORTHO05D002086 1.2e-07 60.8 69 42.0
THA.LOC104806974 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 1.2e-07 60.8 87 40.2
BcaC03g15594 Brassica carinata HOM05D000675 ORTHO05D002086 1.5e-07 60.5 80 40.0
BcaC05g25703 Brassica carinata HOM05D000675 ORTHO05D002086 1.5e-07 60.5 80 38.8
BcaC08g42855 Brassica carinata HOM05D000675 ORTHO05D002086 1.5e-07 60.5 80 38.8
BcaB02g10757 Brassica carinata HOM05D007462 ORTHO05D002086 2.0e-07 60.1 91 36.3
BcaC08g45815 Brassica carinata HOM05D007462 ORTHO05D011074 2.0e-07 60.1 56 50.0
BraA05t21229Z Brassica rapa HOM05D007462 ORTHO05D002086 2.0e-07 60.1 56 46.4
BcaB06g26026 Brassica carinata HOM05D007693 ORTHO05D002086 2.6e-07 59.7 64 50.0
BcaC01g01799 Brassica carinata HOM05D007462 ORTHO05D011074 2.6e-07 59.7 58 46.6
BcaC01g04891 Brassica carinata HOM05D007462 ORTHO05D011074 3.4e-07 59.3 58 48.3
BcaC02g11566 Brassica carinata HOM05D007462 ORTHO05D011074 3.4e-07 59.3 55 49.1
BcaC03g17183 Brassica carinata HOM05D000589 ORTHO05D001885 3.4e-07 59.3 67 41.8
BcaC04g20658 Brassica carinata HOM05D007462 ORTHO05D002086 3.4e-07 59.3 62 43.5
BcaC05g25277 Brassica carinata HOM05D000589 ORTHO05D001885 3.4e-07 59.3 63 42.9
BcaC07g38572 Brassica carinata HOM05D007462 ORTHO05D011074 3.4e-07 59.3 58 48.3
BcaB07g32893 Brassica carinata HOM05D000675 ORTHO05D002086 4.4e-07 58.9 57 47.4
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 4.4e-07 58.9 54 46.3
BolC4t26247H Brassica oleracea HOM05D007462 ORTHO05D002086 4.4e-07 58.9 54 48.1
BcaC01g02140 Brassica carinata HOM05D007462 ORTHO05D002086 5.7e-07 58.5 59 45.8
BcaC05g25361 Brassica carinata HOM05D000675 ORTHO05D002086 5.7e-07 58.5 73 39.7
BolC2t08565H Brassica oleracea HOM05D007462 ORTHO05D002086 5.7e-07 58.5 59 45.8
BolC3t19061H Brassica oleracea HOM05D007462 ORTHO05D002086 5.7e-07 58.5 59 45.8
AT4G04775 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 7.5e-07 58.2 54 50.0
AT5G15690 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 7.5e-07 58.2 54 50.0
BcaB01g03291 Brassica carinata HOM05D000675 ORTHO05D002086 7.5e-07 58.2 69 42.0
BcaC08g44148 Brassica carinata HOM05D007462 ORTHO05D011074 7.5e-07 58.2 58 48.3
BolC2t11199H Brassica oleracea HOM05D000589 ORTHO05D001885 7.5e-07 58.2 63 42.9
BcaC02g07772 Brassica carinata HOM05D007462 ORTHO05D002086 9.8e-07 57.8 59 45.8
BcaC03g14955 Brassica carinata HOM05D007462 ORTHO05D002086 9.8e-07 57.8 59 45.8
BcaC05g24704 Brassica carinata HOM05D000589 ORTHO05D001885 9.8e-07 57.8 61 42.6
BcaC08g42872 Brassica carinata HOM05D007462 ORTHO05D011074 9.8e-07 57.8 58 48.3
BcaC08g44362 Brassica carinata HOM05D000675 ORTHO05D002086 9.8e-07 57.8 63 42.9
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 9.8e-07 57.8 54 46.3
BolC9t55840H Brassica oleracea HOM05D007693 ORTHO05D002086 9.8e-07 57.8 35 65.7
BcaC03g17084 Brassica carinata HOM05D007462 ORTHO05D011074 1.3e-06 57.4 58 48.3
BcaC09g48980 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-06 57.4 66 37.9
BcaC09g48982 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-06 57.4 66 37.9
BcaB01g01312 Brassica carinata HOM05D000675 ORTHO05D003044 1.7e-06 57.0 72 43.1
BcaB03g16439 Brassica carinata HOM05D007462 ORTHO05D011074 1.7e-06 57.0 57 45.6
BcaB08g35730 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-06 57.0 54 50.0
BcaC05g28481 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-06 57.0 80 37.5
BcaC09g49265 Brassica carinata HOM05D007462 ORTHO05D002086 1.7e-06 57.0 57 43.9
CARHR264280 Cardamine hirsuta HOM05D007462 ORTHO05D011074 1.7e-06 57.0 76 43.4
AT2G37125 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 2.2e-06 56.6 63 41.3
AT3G30165 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 2.2e-06 56.6 58 43.1
BcaB04g20307 Brassica carinata HOM05D007462 ORTHO05D002086 2.2e-06 56.6 62 45.2
BcaB05g21895 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-06 56.6 55 45.5
BcaB05g22219 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-06 56.6 55 45.5
BcaB08g34481 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-06 56.6 58 44.8
BcaC06g34269 Brassica carinata HOM05D007462 ORTHO05D002086 2.2e-06 56.6 62 41.9
BcaC06g36027 Brassica carinata HOM05D007462 ORTHO05D002086 2.2e-06 56.6 59 44.1
BcaC09g50385 Brassica carinata HOM05D000675 ORTHO05D002086 2.2e-06 56.6 69 42.0
AT1G48285 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 2.8e-06 56.2 63 41.3
BcaC01g03692 Brassica carinata HOM05D007462 ORTHO05D002086 2.8e-06 56.2 62 41.9
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 2.8e-06 56.2 64 43.8
BcaB03g14368 Brassica carinata HOM05D000675 ORTHO05D002086 3.7e-06 55.8 57 45.6
BcaB04g17253 Brassica carinata HOM05D000977 ORTHO05D001094 3.7e-06 55.8 68 41.2
BcaC03g16749 Brassica carinata HOM05D000675 ORTHO05D002086 3.7e-06 55.8 80 37.5
BcaC04g22824 Brassica carinata HOM05D000675 ORTHO05D002086 3.7e-06 55.8 65 38.5
BcaC05g27351 Brassica carinata HOM05D000675 ORTHO05D002086 3.7e-06 55.8 54 50.0
BcaC09g49807 Brassica carinata HOM05D000675 ORTHO05D002086 3.7e-06 55.8 57 45.6
BolC1t01191H Brassica oleracea HOM05D007462 ORTHO05D002086 3.7e-06 55.8 59 44.1
BolC2t09536H Brassica oleracea HOM05D000675 ORTHO05D002086 3.7e-06 55.8 54 48.1
BolC4t25850H Brassica oleracea HOM05D000675 ORTHO05D002086 3.7e-06 55.8 63 39.7
BolC5t33625H Brassica oleracea HOM05D000675 ORTHO05D002086 3.7e-06 55.8 53 50.9
BcaC03g16220 Brassica carinata HOM05D000675 ORTHO05D002086 4.9e-06 55.5 54 46.3
BcaC05g28255 Brassica carinata HOM05D000675 ORTHO05D002086 4.9e-06 55.5 54 46.3
BcaC06g36214 Brassica carinata HOM05D000675 ORTHO05D002086 4.9e-06 55.5 54 46.3
BolC6t36479H Brassica oleracea HOM05D000977 ORTHO05D001094 4.9e-06 55.5 54 46.3
BolC7t43826H Brassica oleracea HOM05D000589 ORTHO05D001885 4.9e-06 55.5 64 46.9
BolC7t46298H Brassica oleracea HOM05D000589 ORTHO05D001885 4.9e-06 55.5 59 42.4
BcaB08g35719 Brassica carinata HOM05D007693 ORTHO05D002086 6.3e-06 55.1 43 51.2
BcaC05g29029 Brassica carinata HOM05D000675 ORTHO05D002086 6.3e-06 55.1 66 39.4
BcaC07g37477 Brassica carinata HOM05D007462 ORTHO05D002086 8.3e-06 54.7 59 44.1
BolC8t47797H Brassica oleracea HOM05D007462 ORTHO05D002086 8.3e-06 54.7 59 44.1
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 8.3e-06 54.7 64 46.9


User provided reference genes

Program Settings