Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33241 Brassica carinata HOM05D010116 ORTHO05D012794 2.6e-86 322.0 159 100.0
BcaC06g33240 Brassica carinata HOM05D010116 ORTHO05D012794 1.7e-42 176.4 250 46.4
BolC7t45041H Brassica oleracea HOM05D010116 ORTHO05D012794 1.7e-42 176.4 250 46.4
C07p45180 Brassica napus HOM05D010116 ORTHO05D012794 3.9e-42 175.3 250 46.0
A03p47070 Brassica napus HOM05D010116 ORTHO05D012794 4.0e-39 165.2 129 69.8
BraA03t13834Z Brassica rapa HOM05D010116 ORTHO05D012794 4.0e-39 165.2 129 69.8
BcaC06g33152 Brassica carinata HOM05D010116 ORTHO05D012794 9.5e-33 144.1 242 40.9
Sp2g24670 Schrenkiella parvula HOM05D010116 ORTHO05D012794 1.6e-27 126.7 103 68.9
Thhalv10005323m.g Eutrema salsugineum HOM05D010116 ORTHO05D012794 4.3e-25 118.6 98 70.4
AL8G38160 Arabidopsis lyrata HOM05D010116 ORTHO05D012794 7.1e-20 101.3 88 60.2
BcaB07g29827 Brassica carinata HOM05D010116 ORTHO05D012794 2.3e-18 96.3 102 54.9
Carub.0008s2216 Capsella rubella HOM05D010116 ORTHO05D012794 5.6e-17 91.7 89 57.3
AT5G61470 Arabidopsis thaliana HOM05D010116 ORTHO05D012794 9.6e-17 90.9 102 54.9
CARHR275240 Cardamine hirsuta HOM05D010116 ORTHO05D012794 4.9e-13 78.6 88 50.0
BolC2t12210H Brassica oleracea HOM05D010116 ORTHO05D012794 9.3e-12 74.3 267 28.5
BcaC03g18086 Brassica carinata HOM05D010116 ORTHO05D012794 6.6e-10 68.2 88 51.1
BcaC03g18087 Brassica carinata HOM05D010116 ORTHO05D012794 8.7e-10 67.8 56 60.7
A02p41620 Brassica napus HOM05D010116 ORTHO05D012794 8.7e-10 67.8 56 60.7
C02p61560 Brassica napus HOM05D010116 ORTHO05D012794 8.7e-10 67.8 56 60.7
BraA02t09104Z Brassica rapa HOM05D010116 ORTHO05D012794 8.7e-10 67.8 56 60.7
Sed0001361 Sechium edule HOM05D001867 ORTHO05D001708 1.1e-09 67.4 175 31.4
Ah.02g126510 Amaranthus hybridus HOM05D028205 ORTHO05D001406 9.0e-07 57.8 125 30.4
AUR62004159 Chenopodium quinoa HOM05D001867 ORTHO05D001708 4.5e-06 55.5 180 27.8
ECA236G4312 Erigeron canadensis HOM05D001867 ORTHO05D001708 4.5e-06 55.5 150 33.3
AT3G60580 Arabidopsis thaliana HOM05D001867 ORTHO05D001708 7.6e-06 54.7 191 26.7
QL01p014984 Quercus lobata HOM05D000174 ORTHO05D001106 9.9e-06 54.3 126 33.3
QL10p018742 Quercus lobata HOM05D001658 ORTHO05D001406 9.9e-06 54.3 122 33.6


User provided reference genes

Program Settings