Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33198 Brassica carinata HOM05D010173 ORTHO05D007801 3.6e-85 318.2 155 100.0
BcaNung05759 Brassica carinata HOM05D010173 ORTHO05D007801 5.4e-65 251.1 121 100.0
BcaNung02618 Brassica carinata HOM05D010173 ORTHO05D007801 1.6e-61 239.6 157 78.3
C07p44600 Brassica napus HOM05D010173 ORTHO05D007801 1.6e-61 239.6 157 78.3
BolC7t44981H Brassica oleracea HOM05D010173 ORTHO05D007801 1.6e-61 239.6 157 78.3
BraA03t13778Z Brassica rapa HOM05D010173 ORTHO05D007801 6.4e-58 227.6 157 73.2
A03p46540 Brassica napus HOM05D010173 ORTHO05D007801 1.7e-55 219.5 175 65.1
BcaNung02617 Brassica carinata HOM05D010173 ORTHO05D007801 2.1e-53 212.6 176 68.8
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 1.3e-39 166.8 176 58.0
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 1.1e-38 163.7 189 55.6
AL269U10022 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 6.5e-26 121.3 142 50.7
AL269U10040 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 6.5e-26 121.3 142 50.7
AL269U10050 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 6.5e-26 121.3 142 50.7
AL3G41370 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 6.5e-26 121.3 142 50.7
AL3G41390 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 6.5e-26 121.3 142 50.7
AL3G41380 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.2e-25 119.0 142 50.0
AL269U10030 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.5e-25 118.2 142 50.0
AT5G60840 Arabidopsis thaliana HOM05D010173 ORTHO05D007801 2.3e-23 112.8 143 44.8
Carub.0008s2154 Capsella rubella HOM05D010173 ORTHO05D007801 1.1e-22 110.5 146 47.3
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 2.8e-21 105.9 145 41.4
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 1.4e-20 103.6 132 44.7
AL8G37440 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.4e-20 102.8 166 41.0
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.9e-14 83.2 130 40.0
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 2.5e-14 82.8 121 43.0
CARHR274520 Cardamine hirsuta HOM05D010173 ORTHO05D007801 5.7e-14 81.6 126 37.3
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.6e-13 80.1 142 34.5
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 2.2e-13 79.7 147 37.4
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 3.7e-13 79.0 147 34.7
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 6.3e-13 78.2 153 34.6
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.1e-12 77.4 146 31.5
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 1.4e-12 77.0 93 44.1
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 5.3e-12 75.1 144 34.0
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 5.3e-12 75.1 138 36.2
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 6.9e-12 74.7 147 34.7
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 1.2e-11 73.9 113 37.2
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 1.2e-11 73.9 151 28.5
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.5e-11 73.6 118 34.7
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 2.0e-11 73.2 93 41.9
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 3.4e-11 72.4 118 34.7
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 1.7e-10 70.1 138 35.5
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 2.2e-10 69.7 140 31.4
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 2.9e-10 69.3 151 33.1
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 2.9e-10 69.3 125 34.4
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 8.5e-10 67.8 143 31.5
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.1e-09 67.4 140 31.4
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 5.5e-09 65.1 115 33.0
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 7.2e-09 64.7 136 33.8
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 9.4e-09 64.3 101 39.6
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 9.4e-09 64.3 118 32.2
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 9.4e-09 64.3 87 35.6
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 9.4e-09 64.3 118 34.7
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 3.6e-08 62.4 80 35.0
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 4.6e-08 62.0 115 32.2
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 7.9e-08 61.2 130 32.3
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.0e-07 60.8 134 31.3
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 1.4e-07 60.5 127 30.7
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 1.8e-07 60.1 134 31.3
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 2.3e-07 59.7 72 41.7
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 2.3e-07 59.7 147 29.3
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 2.3e-07 59.7 115 30.4
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 3.0e-07 59.3 94 36.2
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 3.0e-07 59.3 85 32.9
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 3.9e-07 58.9 79 39.2
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 3.9e-07 58.9 87 33.3
AL215U10060 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 8.8e-07 57.8 139 33.8
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 8.8e-07 57.8 98 35.7
Manes.06G079602 Manihot esculenta HOM05D007643 ORTHO05D007801 8.8e-07 57.8 79 38.0
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 1.1e-06 57.4 153 28.1
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 2.5e-06 56.2 85 32.9
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 2.5e-06 56.2 90 35.6
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 3.3e-06 55.8 148 27.7
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.3e-06 55.5 93 32.3
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 5.7e-06 55.1 76 39.5


User provided reference genes

Program Settings