Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 9.1e-215 750.0 379 100.0
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 2.6e-193 678.7 379 89.4
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 7.5e-193 677.2 379 89.4
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 1.3e-192 676.4 379 89.7
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 1.3e-192 676.4 379 89.7
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 2.8e-192 675.2 380 89.5
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 9.1e-191 670.2 388 87.4
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 2.9e-189 665.2 384 87.2
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 1.9e-188 662.5 369 89.4
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 8.3e-176 620.5 386 81.1
BcaNung06540 Brassica carinata HOM05D007461 ORTHO05D010345 2.5e-172 609.0 369 87.5
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 3.1e-146 522.3 373 70.2
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 3.8e-144 515.4 373 69.7
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 3.8e-144 515.4 373 69.7
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 2.1e-142 509.6 369 69.9
C01p35430 Brassica napus HOM05D007461 ORTHO05D010345 1.7e-136 490.0 274 89.8
BolC1t03500H Brassica oleracea HOM05D007461 ORTHO05D010345 1.7e-136 490.0 274 89.8
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 2.1e-131 473.0 369 63.1
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 1.3e-99 367.5 204 90.2
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 1.3e-99 367.5 204 90.2
Sp2g27570 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.4e-95 354.0 387 52.5
Thhalv10004320m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 5.9e-89 332.0 354 52.3
BcaC05g26639 Brassica carinata HOM05D007461 ORTHO05D010345 9.1e-82 308.1 386 46.4
A02p43330 Brassica napus HOM05D007461 ORTHO05D010345 2.9e-80 303.1 391 45.8
BraA02t09259Z Brassica rapa HOM05D007461 ORTHO05D010345 2.9e-80 303.1 391 45.8
BcaC03g18265 Brassica carinata HOM05D007461 ORTHO05D010345 5.5e-79 298.9 389 45.8
C02p63400 Brassica napus HOM05D007461 ORTHO05D010345 5.5e-79 298.9 389 45.8
BolC2t12408H Brassica oleracea HOM05D007461 ORTHO05D010345 5.5e-79 298.9 389 45.8
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 8.0e-78 295.0 179 84.9
BcaB07g29745 Brassica carinata HOM05D007461 ORTHO05D010345 1.2e-73 281.2 371 44.2
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 9.1e-66 255.0 353 38.5
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 9.2e-42 175.3 194 49.0
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 1.6e-41 174.5 194 49.0
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 1.3e-40 171.4 194 47.4
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 1.3e-40 171.4 193 48.2
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.7e-40 171.0 195 46.7
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 5.1e-40 169.5 186 47.8
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 3.3e-39 166.8 198 44.4
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 3.3e-39 166.8 198 44.4
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 5.6e-39 166.0 198 44.4
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 5.6e-39 166.0 198 44.4
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 9.5e-39 165.2 205 46.3
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.2e-38 164.9 187 49.7
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 8.1e-38 162.2 175 46.3
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 2.3e-37 160.6 195 46.7
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 3.1e-37 160.2 192 45.3
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 3.1e-37 160.2 193 46.6
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 8.9e-37 158.7 187 47.6
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 3.4e-36 156.8 186 45.2
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 7.5e-36 155.6 184 44.6
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.7e-35 154.5 186 45.2
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 1.7e-35 154.5 191 44.5
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 6.4e-35 152.5 193 44.6
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 8.3e-35 152.1 187 46.5
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 1.2e-33 148.3 190 41.6
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 1.6e-33 147.9 195 43.1
A03p47330 Brassica napus HOM05D007461 ORTHO05D010345 2.1e-33 147.5 82 90.2
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 5.1e-32 142.9 362 29.6
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 1.6e-30 137.9 164 42.7
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 1.6e-30 137.9 164 42.7
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 1.6e-30 137.9 164 42.1
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 4.7e-30 136.3 189 42.3
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 6.2e-30 136.0 163 41.7
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 1.1e-29 135.2 192 40.6
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 1.8e-29 134.4 198 40.4
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 2.4e-29 134.0 190 42.6
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 2.4e-29 134.0 187 42.2
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 6.8e-29 132.5 193 40.4
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 8.9e-29 132.1 198 39.4
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 1.2e-28 131.7 190 42.6
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 1.5e-28 131.3 190 42.6
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 1.5e-28 131.3 189 41.8
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 4.4e-28 129.8 192 38.5
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 4.4e-28 129.8 190 38.9
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 4.4e-28 129.8 192 38.5
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 2.9e-27 127.1 190 41.1
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 2.9e-27 127.1 190 41.1
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 2.9e-27 127.1 192 38.0
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 2.9e-27 127.1 192 38.0
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 2.9e-27 127.1 192 38.0
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 3.8e-27 126.7 190 37.9
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 2.4e-26 124.0 188 38.8
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 9.2e-26 122.1 190 38.4
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 1.2e-25 121.7 190 36.3
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 1.2e-25 121.7 190 36.3
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 4.6e-25 119.8 190 35.8
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 2.3e-24 117.5 169 39.6
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 3.0e-24 117.1 169 39.6
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 6.6e-24 115.9 190 35.8
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 4.3e-23 113.2 172 34.3
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 9.6e-23 112.1 171 38.6
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 9.6e-23 112.1 172 34.9
Aa31LG2G4430 Aethionema arabicum HOM05D007461 ORTHO05D010345 1.2e-22 111.7 187 35.8
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 1.2e-22 111.7 169 37.9
CARHR151830 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.2e-22 111.7 193 38.9
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 1.1e-21 108.6 121 45.5
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 6.9e-21 105.9 190 34.7
BcaC06g33643 Brassica carinata HOM05D007461 ORTHO05D010345 3.4e-20 103.6 132 40.9
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.9e-18 97.8 125 44.0
BcaC06g30893 Brassica carinata HOM05D007461 ORTHO05D010345 2.7e-17 94.0 132 37.9
BcaB07g30114 Brassica carinata HOM05D007461 ORTHO05D011250 1.3e-11 75.1 119 35.3
BcaC03g17533 Brassica carinata HOM05D007461 ORTHO05D011250 6.4e-11 72.8 64 53.1
Aa31LG6G10290 Aethionema arabicum HOM05D007461 ORTHO05D011250 8.4e-11 72.4 170 30.6
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 8.4e-11 72.4 190 26.8
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.1e-10 72.0 190 26.3
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.1e-10 72.0 190 26.3
Aa31LG2G4440 Aethionema arabicum HOM05D011893 ORTHO05D013967 6.0e-09 66.2 153 30.7
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 2.3e-08 64.3 196 26.5
Sp7g02170 Schrenkiella parvula HOM05D008352 ORTHO05D014403 6.7e-08 62.8 155 29.7
C04p46350 Brassica napus HOM05D008352 ORTHO05D014403 1.1e-07 62.0 146 30.1
BolC4t26221H Brassica oleracea HOM05D008352 ORTHO05D014403 1.1e-07 62.0 146 30.1
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 2.5e-07 60.8 159 26.4
BcaC06g33640 Brassica carinata HOM05D007461 ORTHO05D093415 2.5e-07 60.8 69 46.4
THA.LOC104823938 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 2.5e-07 60.8 182 28.0
AT5G39870 Arabidopsis thaliana HOM05D008352 ORTHO05D014403 4.3e-07 60.1 159 28.9
A04p12630 Brassica napus HOM05D008352 ORTHO05D014403 4.3e-07 60.1 146 29.5
BraA04t16920Z Brassica rapa HOM05D008352 ORTHO05D014403 4.3e-07 60.1 146 29.5
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 5.6e-07 59.7 159 29.6
THA.LOC104823936 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 1.3e-06 58.5 184 28.3
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 2.1e-06 57.8 160 27.5


User provided reference genes

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