Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33115 Brassica carinata HOM05D002328 ORTHO05D002433 2.0e-127 459.1 237 100.0
BcaC06g33113 Brassica carinata HOM05D002328 ORTHO05D002433 6.9e-96 354.4 251 77.7
BraA03t13877Z Brassica rapa HOM05D002328 ORTHO05D002433 7.9e-84 314.3 245 74.3
A03p47650 Brassica napus HOM05D002328 ORTHO05D002433 1.0e-83 313.9 243 72.0
BolC7t45083H Brassica oleracea HOM05D002328 ORTHO05D002433 3.9e-75 285.4 235 68.1
BcaC06g33278 Brassica carinata HOM05D002328 ORTHO05D002433 3.7e-73 278.9 243 65.0
Sp5g12070 Schrenkiella parvula HOM05D002328 ORTHO05D002433 2.0e-71 273.1 241 64.7
C01p30270 Brassica napus HOM05D002328 ORTHO05D002433 1.3e-62 243.8 237 62.9
BolC1t02971H Brassica oleracea HOM05D002328 ORTHO05D002433 1.3e-62 243.8 237 62.9
BcaC09g49996 Brassica carinata HOM05D002328 ORTHO05D002433 1.7e-62 243.4 237 62.9
BcaB05g23182 Brassica carinata HOM05D002328 ORTHO05D002433 8.0e-60 234.6 232 59.5
A01p24340 Brassica napus HOM05D002328 ORTHO05D002433 8.0e-60 234.6 229 62.4
BraA01t02347Z Brassica rapa HOM05D002328 ORTHO05D002433 8.0e-60 234.6 229 62.4
Thhalv10010406m.g Eutrema salsugineum HOM05D002328 ORTHO05D002433 1.5e-53 213.8 237 59.1
C07p45620 Brassica napus HOM05D002328 ORTHO05D002433 3.4e-50 202.6 235 52.8
AL5G30160 Arabidopsis lyrata HOM05D002328 ORTHO05D002433 1.9e-45 186.8 234 51.3
Carub.0005s1639 Capsella rubella HOM05D002328 ORTHO05D002433 2.8e-44 183.0 232 51.3
BcaC06g33277 Brassica carinata HOM05D002328 ORTHO05D002433 1.1e-35 154.5 225 44.9
AT3G50040 Arabidopsis thaliana HOM05D002328 ORTHO05D002433 8.9e-35 151.4 198 49.5
CARHR159110 Cardamine hirsuta HOM05D002328 ORTHO05D002433 3.0e-30 136.3 233 44.6
THA.LOC104819250 Tarenaya hassleriana HOM05D002328 ORTHO05D002433 7.1e-16 88.6 234 33.3
THA.LOC104827484 Tarenaya hassleriana HOM05D002328 ORTHO05D002433 5.1e-14 82.4 235 31.1
Atru.chr11.1691 Acer truncatum HOM05D002328 ORTHO05D002433 2.9e-09 66.6 220 26.8
GSVIVG01038145001 Vitis vinifera HOM05D002328 ORTHO05D002433 6.0e-07 58.9 105 36.2
PSO339G2753 Papaver somniferum HOM05D002328 ORTHO05D002433 1.3e-06 57.8 135 31.9
PSO384G5057 Papaver somniferum HOM05D002328 ORTHO05D002433 1.3e-06 57.8 135 31.9
Atru.chr3.217 Acer truncatum HOM05D002328 ORTHO05D002433 3.0e-06 56.6 99 37.4
Gohir.D08G240300 Gossypium hirsutum HOM05D002328 ORTHO05D002433 3.9e-06 56.2 124 33.9
Gorai.004G255600 Gossypium raimondii HOM05D002328 ORTHO05D002433 8.7e-06 55.1 124 33.9
MD07G1104500 Malus domestica HOM05D002328 ORTHO05D002433 8.7e-06 55.1 108 34.3


User provided reference genes

Program Settings