Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33056 Brassica carinata HOM05D001544 ORTHO05D005712 1.3e-117 426.4 217 100.0
A03p48120 Brassica napus HOM05D001544 ORTHO05D005712 2.9e-117 425.2 217 99.5
C07p46160 Brassica napus HOM05D001544 ORTHO05D005712 2.9e-117 425.2 217 99.5
BolC7t45132H Brassica oleracea HOM05D001544 ORTHO05D005712 2.9e-117 425.2 217 99.5
BraA03t13919Z Brassica rapa HOM05D001544 ORTHO05D005712 2.9e-117 425.2 217 99.5
Sp5g11110 Schrenkiella parvula HOM05D001544 ORTHO05D005712 2.3e-98 362.5 219 85.4
AT3G51100 Arabidopsis thaliana HOM05D001544 ORTHO05D005712 1.5e-89 333.2 219 81.3
CARHR160690 Cardamine hirsuta HOM05D001544 ORTHO05D005712 4.4e-89 331.6 218 80.3
Carub.0005s1750 Capsella rubella HOM05D001544 ORTHO05D005712 2.9e-88 328.9 217 79.3
AL5G31520 Arabidopsis lyrata HOM05D001544 ORTHO05D005712 7.0e-87 324.3 217 79.3
Thhalv10010713m.g Eutrema salsugineum HOM05D001544 ORTHO05D005712 1.9e-84 316.2 217 78.3
Aa31LG4G19200 Aethionema arabicum HOM05D001544 ORTHO05D005712 9.5e-84 313.9 218 75.2
THA.LOC104821318 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 5.2e-74 281.6 218 68.8
Cpa.g.sc6.211 Carica papaya HOM05D001544 ORTHO05D005712 2.1e-59 233.0 222 58.1
Manes.02G100900 Manihot esculenta HOM05D001544 ORTHO05D005712 1.3e-53 213.8 213 53.5
Potri.005G117400 Populus trichocarpa HOM05D001544 ORTHO05D005712 3.0e-53 212.6 195 60.0
QL06p034007 Quercus lobata HOM05D001544 ORTHO05D005712 3.6e-51 205.7 212 54.2
THA.LOC104826761 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 6.2e-51 204.9 208 52.9
Potri.007G016200 Populus trichocarpa HOM05D001544 ORTHO05D005712 2.4e-50 203.0 190 56.8
CARHR160680 Cardamine hirsuta HOM05D001544 ORTHO05D005712 9.0e-50 201.1 195 59.0
Hma1.2p1_0266F.1_g106940 Hydrangea macrophylla HOM05D001544 ORTHO05D005712 5.8e-49 198.4 181 56.9
Manes.01G142600 Manihot esculenta HOM05D001544 ORTHO05D005712 2.9e-48 196.1 217 52.1
Dinv40055 Davidia involucrata HOM05D001544 ORTHO05D005712 1.1e-47 194.1 190 53.7
Nn5g29207 Nelumbo nucifera HOM05D001544 ORTHO05D002732 3.2e-47 192.6 189 51.9
Hund14027 Selenicereus undatus HOM05D001544 ORTHO05D005712 7.1e-47 191.4 226 45.6
Atru.chr5.3135 Acer truncatum HOM05D001544 ORTHO05D005712 2.1e-46 189.9 190 53.7
Gohir.D02G220200 Gossypium hirsutum HOM05D001544 ORTHO05D005712 6.0e-46 188.3 191 53.4
Gorai.005G248100 Gossypium raimondii HOM05D001544 ORTHO05D005712 6.0e-46 188.3 191 53.4
Sc03g0003410 Simmondsia chinensis HOM05D001544 ORTHO05D005712 5.1e-45 185.3 216 46.8
CiPaw.07G055800 Carya illinoinensis HOM05D001544 ORTHO05D005712 6.7e-45 184.9 216 49.1
Lsat_1_v5_gn_2_78361 Lactuca sativa HOM05D001544 ORTHO05D005712 6.7e-45 184.9 215 47.4
Duzib132G0442 Durio zibethinus HOM05D001544 ORTHO05D005712 1.5e-44 183.7 188 53.7
GSVIVG01024183001 Vitis vinifera HOM05D001544 ORTHO05D005712 1.5e-44 183.7 204 48.5
HanXRQChr13g0414781 Helianthus annuus HOM05D001544 ORTHO05D005712 2.5e-44 183.0 190 52.6
Gohir.A03G198800 Gossypium hirsutum HOM05D001544 ORTHO05D005712 3.3e-44 182.6 191 50.8
Ciclev10029261m.g Citrus clementina HOM05D001544 ORTHO05D005712 4.3e-44 182.2 191 49.7
MSTRG.23282 Avicennia marina HOM05D001544 ORTHO05D005712 1.6e-43 180.3 208 49.0
QL11p046076 Quercus lobata HOM05D001544 ORTHO05D005712 2.1e-43 179.9 220 47.3
HanXRQChr14g0441601 Helianthus annuus HOM05D001544 ORTHO05D005712 4.8e-43 178.7 194 52.1
Lj3g0003276 Lotus japonicus HOM05D001544 ORTHO05D005712 8.1e-43 177.9 194 52.1
Lalb_Chr01g0002161 Lupinus albus HOM05D001544 ORTHO05D005712 1.1e-42 177.6 197 50.3
Nitab4.5_0000753g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 1.8e-42 176.8 190 51.6
Thecc.02G076200 Theobroma cacao HOM05D001544 ORTHO05D005712 1.8e-42 176.8 215 47.4
TWI79G0125 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 5.3e-42 175.3 190 50.0
TAR625G1395 Trochodendron aralioides HOM05D001544 ORTHO05D005712 5.3e-42 175.3 206 45.6
Aqoxy5G01497 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 9.0e-42 174.5 191 48.7
MELO3C023351.2 Cucumis melo HOM05D001544 ORTHO05D005712 1.5e-41 173.7 191 49.7
RcHm_v2.0_Chr2g0099951 Rosa chinensis HOM05D001544 ORTHO05D005712 2.0e-41 173.3 192 49.5
SalBow8G0407 Salvia bowleyana HOM05D001544 ORTHO05D005712 2.0e-41 173.3 214 45.8
CSS0013177 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 2.6e-41 172.9 188 48.9
Prupe.8G085800 Prunus persica HOM05D001544 ORTHO05D005712 2.6e-41 172.9 217 44.7
CsaV3_2G015260 Cucumis sativus L. HOM05D001544 ORTHO05D005712 3.4e-41 172.6 191 49.2
Oeu021945.1 Olea europaea HOM05D001544 ORTHO05D005712 3.4e-41 172.6 205 46.8
Phvul.011G039500 Phaseolus vulgaris HOM05D001544 ORTHO05D005712 3.4e-41 172.6 183 49.2
Sopen03g006440 Solanum pennellii HOM05D001544 ORTHO05D005712 4.5e-41 172.2 219 45.7
Nitab4.5_0010830g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 5.8e-41 171.8 192 50.5
Rhsim10G0214300 Rhododendron simsii HOM05D001544 ORTHO05D005712 7.6e-41 171.4 196 47.4
Solyc03g033650.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 7.6e-41 171.4 189 48.7
SGA_v2.0_scaffold51G18782 Striga asiatica HOM05D001544 ORTHO05D005712 1.3e-40 170.6 218 45.9
Sed0017058 Sechium edule HOM05D001544 ORTHO05D005712 2.2e-40 169.9 210 45.2
PGSC0003DMG401022539 Solanum tuberosum HOM05D001544 ORTHO05D005712 2.2e-40 169.9 190 48.9
Haze_03811 Corylus avellana HOM05D001544 ORTHO05D005712 2.9e-40 169.5 230 44.3
Eucgr.G01724 Eucalyptus grandis HOM05D001544 ORTHO05D005712 2.9e-40 169.5 195 44.1
Os06g0713900 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 2.9e-40 169.5 190 45.8
TPR.G34176 Trifolium pratense HOM05D001544 ORTHO05D005712 4.9e-40 168.7 193 48.2
Sed0002010 Sechium edule HOM05D001544 ORTHO05D005712 6.4e-40 168.3 195 45.6
CiPaw.06G128900 Carya illinoinensis HOM05D001544 ORTHO05D005712 8.4e-40 167.9 191 50.8
MD10G1064100 Malus domestica HOM05D001544 ORTHO05D005712 1.1e-39 167.5 190 47.9
FvH4_2g10310 Fragaria vesca HOM05D001544 ORTHO05D005712 1.9e-39 166.8 181 49.7
Glyma.11G111600 Glycine max HOM05D001544 ORTHO05D005712 1.9e-39 166.8 183 49.2
Psat7g226160 Pisum sativum HOM05D001544 ORTHO05D005712 2.4e-39 166.4 190 48.9
TWI75G0115 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 3.2e-39 166.0 221 43.4
Cfa005097 Carpinus fangiana HOM05D001544 ORTHO05D005712 4.2e-39 165.6 215 47.0
FAN15G2093 Fragaria x ananassa HOM05D001544 ORTHO05D005712 4.2e-39 165.6 181 49.2
PGR042G1893 Punica granatum HOM05D001544 ORTHO05D005712 4.2e-39 165.6 188 44.1
Medtr4g032740 Medicago truncatula HOM05D001544 ORTHO05D005712 7.1e-39 164.9 193 48.7
arahy.Tifrunner.gnm1.ann1.3WL649 Arachis hypogaea HOM05D001544 ORTHO05D005712 9.3e-39 164.5 191 48.7
ECA238G2610 Erigeron canadensis HOM05D002906 ORTHO05D003211 1.2e-38 164.1 181 48.6
FAN20G3124 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.1e-38 163.3 181 49.7
RcHm_v2.0_Chr6g0267511 Rosa chinensis HOM05D001544 ORTHO05D005712 2.1e-38 163.3 181 49.7
SEGI_21342 Sequoiadendron giganteum HOM05D001544 ORTHO05D005712 2.7e-38 162.9 206 47.1
Prupe.7G164800 Prunus persica HOM05D001544 ORTHO05D005712 3.5e-38 162.5 210 45.7
Glyma.01G006900 Glycine max HOM05D001544 ORTHO05D005712 4.6e-38 162.2 183 48.6
FAN24G0484 Fragaria x ananassa HOM05D001544 ORTHO05D005712 1.3e-37 160.6 195 47.7
ClCG11G003920 Citrullus lanatus HOM05D001544 ORTHO05D005712 1.8e-37 160.2 211 43.6
PSO675G4981 Papaver somniferum HOM05D001544 ORTHO05D005712 2.3e-37 159.8 229 42.4
Migut.L00036 Erythranthe guttata HOM05D001544 ORTHO05D005712 6.7e-37 158.3 191 46.1
PSO541G2534 Papaver somniferum HOM05D001544 ORTHO05D005712 1.1e-36 157.5 220 44.1
CSS0007563 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 1.5e-36 157.1 168 48.8
CANSAT11G1780 Cannabis sativa HOM05D001544 ORTHO05D005712 1.5e-36 157.1 202 44.1
SGA_v2.0_scaffold2G01246 Striga asiatica HOM05D001544 ORTHO05D005712 1.9e-36 156.8 235 43.0
MD02G1135800 Malus domestica HOM05D001544 ORTHO05D005712 2.5e-36 156.4 191 45.0
VMungo1127G0458 Vigna mungo HOM05D001544 ORTHO05D005712 4.3e-36 155.6 181 47.0
DCAR_025988 Daucus carota HOM05D001544 ORTHO05D005712 5.6e-36 155.2 191 45.5
PSO210G7387 Papaver somniferum HOM05D001544 ORTHO05D005712 1.3e-35 154.1 202 42.6
Zm00001eb227920 Zea mays HOM05D001544 ORTHO05D005712 2.8e-35 152.9 221 38.9
MD15G1249400 Malus domestica HOM05D001544 ORTHO05D005712 3.7e-35 152.5 192 45.8
Migut.H02483 Erythranthe guttata HOM05D001544 ORTHO05D005712 1.4e-34 150.6 182 46.7
PGSC0003DMG402003620 Solanum tuberosum HOM05D001544 ORTHO05D005712 2.4e-34 149.8 190 44.2
unitig_0.g2167 Utricularia gibba HOM05D001544 ORTHO05D005712 2.4e-34 149.8 214 40.2
Solyc02g084550.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 2.2e-32 143.3 204 40.7
Aqoxy6G02390 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 4.9e-32 142.1 199 40.7
Sopen02g029220 Solanum pennellii HOM05D001544 ORTHO05D005712 1.1e-31 141.0 203 39.9
Thecc.01G023700 Theobroma cacao HOM05D001544 ORTHO05D005712 1.4e-31 140.6 181 44.8
Sabra05G0096400 Salix brachista HOM05D001544 ORTHO05D005712 1.9e-31 140.2 220 43.2
Lj3g0002354 Lotus japonicus HOM05D001544 ORTHO05D005712 2.5e-31 139.8 188 44.7
Peaxi162Scf00010g00610 Petunia axillaris HOM05D001544 ORTHO05D005712 2.5e-31 139.8 190 44.2
vmacro21904 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 3.2e-31 139.4 128 53.1
Cc07_g10380 Coffea canephora HOM05D001544 ORTHO05D005712 5.5e-31 138.7 131 53.4
Lj4A214G24 Lonicera japonica HOM05D001544 ORTHO05D005712 1.2e-30 137.5 113 58.4
vmacro22095 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 1.2e-30 137.5 196 43.4
HPP92_022282 Vanilla planifolia HOM05D001544 ORTHO05D005712 1.3e-29 134.0 145 51.0
Cfa006938 Carpinus fangiana HOM05D001544 ORTHO05D005712 1.8e-29 133.7 150 49.3
Sabra07G0013400 Salix brachista HOM05D001544 ORTHO05D005712 3.9e-29 132.5 287 33.8
arahy.Tifrunner.gnm1.ann1.3TM7ML Arachis hypogaea HOM05D001544 ORTHO05D005712 3.3e-28 129.4 121 53.7
EL10As8g23856 Beta vulgaris HOM05D001544 ORTHO05D005712 4.3e-28 129.0 139 47.5
FAN23G1654 Fragaria x ananassa HOM05D002906 ORTHO05D003211 1.3e-27 127.5 191 41.9
FAN26G2191 Fragaria x ananassa HOM05D001544 ORTHO05D005712 4.8e-27 125.6 191 41.4
Gohir.D11G185900 Gossypium hirsutum HOM05D001544 ORTHO05D005712 4.8e-27 125.6 201 37.8
FAN28G0278 Fragaria x ananassa HOM05D001544 ORTHO05D005712 6.3e-27 125.2 191 41.4
Gohir.A11G178100 Gossypium hirsutum HOM05D001544 ORTHO05D005712 6.3e-27 125.2 215 35.8
Zm00001eb103400 Zea mays HOM05D001544 ORTHO05D005712 8.2e-27 124.8 211 39.3
Gorai.007G197500 Gossypium raimondii HOM05D001544 ORTHO05D005712 1.1e-26 124.4 205 36.1
Dinv33599 Davidia involucrata HOM05D001544 ORTHO05D005712 4.1e-26 122.5 93 60.2
Lalb_Chr19g0138931 Lupinus albus HOM05D001544 ORTHO05D005712 6.9e-26 121.7 156 43.6
Dinv23461 Davidia involucrata HOM05D001544 ORTHO05D005712 1.5e-25 120.6 113 51.3
Mapoly0074s0044 Marchantia polymorpha HOM05D001544 ORTHO05D005712 4.5e-25 119.0 190 42.6
Oeu037732.1 Olea europaea HOM05D001544 ORTHO05D005712 1.3e-24 117.5 146 45.9
arahy.Tifrunner.gnm1.ann1.N6BS4T Arachis hypogaea HOM05D001544 ORTHO05D005712 8.5e-24 114.8 93 60.2
FvH4_1g12190 Fragaria vesca HOM05D001544 ORTHO05D005712 1.2e-22 110.9 156 43.6
PSO170G3698 Papaver somniferum HOM05D001544 ORTHO05D005712 1.6e-22 110.5 117 47.9
Ca_19707_v3 Cicer arietinum L. HOM05D001544 ORTHO05D005712 2.1e-22 110.2 163 40.5
CDE12G0819 Ceratophyllum demersum HOM05D001544 ORTHO05D002732 3.6e-22 109.4 160 40.6
Os09g0530700 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 1.8e-21 107.1 116 44.8
MBI14_g19731_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 8.7e-21 104.8 199 36.7
Rhsim08G0035500 Rhododendron simsii HOM05D001544 ORTHO05D005712 8.7e-21 104.8 162 40.1
SMO361G0705 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 8.2e-19 98.2 191 35.6
SMO004G0024 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 5.3e-18 95.5 198 33.3
Dinv42006 Davidia involucrata HOM05D001544 ORTHO05D002732 9.1e-18 94.7 204 35.3
FAN23G2664 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.0e-17 93.6 147 42.9
Pp3c26_11470 Physcomitrium patens HOM05D001544 ORTHO05D005712 2.6e-17 93.2 192 29.7
MBI14_g19737_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 4.5e-17 92.4 72 59.7
Pp3c3_3130 Physcomitrium patens HOM05D001544 ORTHO05D005712 1.0e-16 91.3 197 28.4
TAR381G0232 Trochodendron aralioides HOM05D001544 ORTHO05D005712 3.8e-16 89.4 95 46.3
AagrBONN_evm.TU.Sc2ySwM_362.490 Anthoceros agrestis HOM05D001544 ORTHO05D005712 3.2e-15 86.3 149 36.9
Pp3c14_16330 Physcomitrium patens HOM05D001544 ORTHO05D005712 4.2e-15 85.9 191 32.5
Thecc.01G023500 Theobroma cacao HOM05D001544 ORTHO05D005712 1.4e-13 80.9 143 37.8
Zm00001eb319500 Zea mays HOM05D001544 ORTHO05D005712 1.8e-13 80.5 142 35.9
CBR_g12214 Chara braunii HOM05D068249 ORTHO05D005712 4.5e-09 65.9 259 25.9
PSO675G0307 Papaver somniferum HOM05D001544 ORTHO05D005712 5.9e-09 65.5 116 35.3
TAR626G0405 Trochodendron aralioides HOM05D000010 ORTHO05D016350 2.1e-06 57.0 39 66.7
Actinidia23006 Actinidia chinensis HOM05D001544 ORTHO05D005712 3.6e-06 56.2 76 42.1


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