Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 9.1e-59 229.9 109 100.0
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 7.2e-56 220.3 109 95.4
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 5.1e-54 214.2 109 91.7
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 2.2e-52 208.8 109 88.1
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 2.8e-52 208.4 126 81.7
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 1.8e-51 205.7 107 88.8
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 7.7e-50 200.3 131 75.6
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 1.3e-49 199.5 109 85.3
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.3e-49 199.5 107 85.0
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 2.2e-49 198.7 107 85.0
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 1.4e-48 196.1 102 86.3
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 2.1e-47 192.2 126 75.4
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 2.1e-47 192.2 126 75.4
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 3.9e-46 188.0 126 73.0
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 1.5e-45 186.0 126 72.2
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 1.6e-39 166.0 121 65.3
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 1.2e-37 159.8 107 68.2
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 1.7e-33 146.0 79 82.3
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 8.5e-33 143.7 126 59.5
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 1.8e-30 136.0 105 59.0
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 4.0e-30 134.8 105 60.0
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 5.2e-30 134.4 99 60.6
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 6.8e-30 134.0 98 60.2
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 8.8e-30 133.7 105 58.1
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 1.2e-29 133.3 99 61.6
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 1.2e-29 133.3 108 58.3
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 1.5e-29 132.9 105 58.1
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 1.5e-29 132.9 105 59.0
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 2.6e-29 132.1 104 57.7
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 3.4e-29 131.7 105 58.1
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 4.4e-29 131.3 105 56.2
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 4.4e-29 131.3 105 58.1
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 5.7e-29 131.0 105 58.1
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 5.7e-29 131.0 105 55.2
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 7.5e-29 130.6 105 56.2
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 7.5e-29 130.6 105 57.1
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 9.8e-29 130.2 106 57.5
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 9.8e-29 130.2 109 56.9
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.7e-28 129.4 105 57.1
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 2.2e-28 129.0 94 62.8
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 2.2e-28 129.0 104 58.7
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 4.8e-28 127.9 105 55.2
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 6.3e-28 127.5 98 56.1
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 6.3e-28 127.5 107 57.0
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 1.1e-27 126.7 95 56.8
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 1.1e-27 126.7 105 56.2
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.1e-27 126.7 105 57.1
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.1e-27 126.7 105 57.1
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.4e-27 126.3 93 62.4
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 1.8e-27 125.9 106 55.7
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.8e-27 125.9 102 55.9
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 1.8e-27 125.9 100 57.0
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 2.4e-27 125.6 98 58.2
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 2.4e-27 125.6 93 58.1
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 4.1e-27 124.8 94 59.6
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 4.1e-27 124.8 107 53.3
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 5.4e-27 124.4 107 53.3
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 5.4e-27 124.4 105 56.2
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 7.0e-27 124.0 94 60.6
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 7.0e-27 124.0 99 51.5
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 9.1e-27 123.6 97 56.7
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 9.1e-27 123.6 98 57.1
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 9.1e-27 123.6 98 57.1
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 1.2e-26 123.2 104 55.8
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.2e-26 123.2 94 59.6
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 2.0e-26 122.5 93 55.9
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 2.0e-26 122.5 94 59.6
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 3.5e-26 121.7 94 58.5
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.9e-26 120.9 98 56.1
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 7.7e-26 120.6 125 48.0
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 1.0e-25 120.2 102 55.9
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 1.3e-25 119.8 99 53.5
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.3e-25 119.8 99 55.6
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 1.3e-25 119.8 107 53.3
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 1.7e-25 119.4 105 52.4
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.7e-25 119.4 98 55.1
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 2.3e-25 119.0 105 54.3
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 3.8e-25 118.2 98 55.1
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 5.0e-25 117.9 94 58.5
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 6.5e-25 117.5 107 51.4
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 2.5e-24 115.5 107 50.5
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 3.3e-24 115.2 107 51.4
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 4.2e-24 114.8 105 50.5
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 4.2e-24 114.8 100 49.0
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 5.5e-24 114.4 97 53.6
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 7.2e-24 114.0 105 52.4
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 1.6e-23 112.8 92 56.5
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.1e-23 110.9 98 52.0
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.8e-22 109.4 90 55.6
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.0e-22 108.2 102 51.0
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 4.0e-22 108.2 92 55.4
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 4.0e-22 108.2 99 51.5
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 5.2e-22 107.8 104 51.0
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.8e-22 107.5 91 53.8
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.2e-21 106.7 99 50.5
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 2.0e-21 105.9 174 37.4
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 3.4e-21 105.1 103 47.6
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.3e-20 103.2 112 46.4
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 2.2e-20 102.4 99 49.5
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 6.3e-20 100.9 89 52.8
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 8.3e-20 100.5 130 40.0
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 7.0e-19 97.4 81 55.6
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 2.7e-18 95.5 77 57.1
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 5.9e-18 94.4 77 57.1
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 2.3e-17 92.4 69 59.4
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 5.0e-17 91.3 69 59.4
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 6.6e-17 90.9 97 41.2
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 8.6e-17 90.5 77 53.2
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 1.5e-16 89.7 77 54.5
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 1.9e-16 89.4 72 56.9
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 3.3e-16 88.6 70 55.7
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 5.6e-16 87.8 77 50.6
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 7.3e-16 87.4 81 48.1
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 7.3e-16 87.4 55 65.5
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.2e-15 86.7 103 43.7
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.1e-15 85.9 78 50.0
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 6.1e-15 84.3 77 50.6
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 4.0e-14 81.6 73 52.1
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 5.2e-14 81.3 78 46.2
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.2e-13 80.1 72 51.4
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 9.8e-13 77.0 71 52.1
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 1.4e-11 73.2 76 48.7
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 3.2e-11 72.0 46 60.9
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 2.1e-07 59.3 90 33.3
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 8.9e-06 53.9 40 57.5


User provided reference genes

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