Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 0.0e+00 1290.8 713 100.0
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 3.2e-298 1028.1 728 83.7
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 3.2e-298 1028.1 728 83.7
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 2.7e-297 1025.0 727 83.6
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 2.7e-297 1025.0 727 83.6
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 9.2e-269 930.2 737 74.5
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 9.8e-263 910.2 739 73.5
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 6.6e-259 897.5 740 73.5
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 1.1e-253 880.2 738 71.7
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 4.0e-248 861.7 737 70.7
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 2.4e-232 809.3 744 66.0
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 4.6e-228 795.0 728 69.9
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 4.6e-228 795.0 725 69.5
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 1.0e-227 793.9 730 69.6
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 6.7e-227 791.2 729 68.0
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 6.9e-224 781.2 725 69.4
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 1.7e-193 680.2 761 59.3
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 8.6e-166 588.2 770 51.6
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 1.0e-158 564.7 776 51.3
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 4.8e-84 316.6 855 33.7
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 3.0e-78 297.4 805 33.7
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 5.2e-78 296.6 805 33.5
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 1.1e-77 295.4 807 34.3
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 7.4e-77 292.7 784 33.5
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 3.7e-76 290.4 811 33.9
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 6.3e-76 289.7 793 33.3
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 1.2e-74 285.4 785 33.6
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 1.8e-70 271.6 789 33.2
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 1.5e-69 268.5 797 33.1
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 1.3e-68 265.4 805 31.7
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 1.7e-68 265.0 783 33.2
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 5.3e-67 260.0 793 31.5
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 7.7e-66 256.1 794 32.1
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 2.9e-65 254.2 789 32.2
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 1.2e-63 248.8 776 32.6
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 1.2e-63 248.8 785 32.7
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 4.7e-63 246.9 799 32.2
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 2.3e-62 244.6 801 34.2
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 4.4e-61 240.4 787 32.4
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.4e-59 235.3 855 29.5
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 4.1e-59 233.8 802 32.5
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 7.0e-59 233.0 806 33.0
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 5.9e-58 229.9 799 31.5
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 1.7e-57 228.4 791 30.5
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 2.9e-57 227.6 815 30.3
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 5.5e-56 223.4 796 32.9
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 7.2e-56 223.0 803 32.5
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 1.2e-55 222.2 793 30.3
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 1.6e-55 221.9 799 33.0
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.4e-54 218.8 796 33.4
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 1.8e-54 218.4 783 30.1
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 5.2e-54 216.9 803 30.5
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 6.8e-54 216.5 794 33.4
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 8.9e-54 216.1 785 30.3
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 1.2e-53 215.7 783 30.1
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 1.3e-52 212.2 809 31.8
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 2.2e-52 211.5 798 30.3
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 3.7e-52 210.7 785 28.9
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 6.3e-52 209.9 780 31.4
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 2.0e-50 204.9 791 27.8
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 6.6e-49 199.9 788 32.1
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 6.6e-49 199.9 795 31.2
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.6e-47 195.3 780 32.8
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 2.1e-47 194.9 812 30.4
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 1.4e-46 192.2 809 29.5
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 4.0e-46 190.7 779 28.5
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 2.6e-45 188.0 788 29.3
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 2.6e-45 188.0 781 28.9
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 9.8e-45 186.0 950 26.1
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 2.2e-44 184.9 830 27.6
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.6e-42 178.7 752 28.5
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 7.8e-42 176.4 652 27.8
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 2.3e-41 174.9 703 27.6
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 3.9e-41 174.1 683 29.3
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 8.6e-41 172.9 928 26.0
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.1e-40 172.6 695 28.1
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 4.0e-38 164.1 657 28.8
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 8.9e-38 162.9 797 28.2
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 8.3e-36 156.4 795 28.2
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 1.4e-35 155.6 795 28.1
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 5.4e-35 153.7 797 28.0
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 2.1e-34 151.8 715 28.5
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 5.0e-33 147.1 800 29.0
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 2.5e-32 144.8 739 28.7
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 1.6e-31 142.1 689 28.4
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 2.8e-31 141.4 717 27.8
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 2.8e-31 141.4 705 28.9
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 2.8e-31 141.4 707 28.1
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 2.8e-31 141.4 715 27.3
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 1.2e-29 136.0 787 26.7
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 1.5e-29 135.6 798 27.1
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 2.6e-29 134.8 776 27.3
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 4.4e-29 134.0 642 29.0
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 5.8e-29 133.7 746 26.5
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 8.3e-28 129.8 658 26.7
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 3.2e-27 127.9 758 27.3
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 5.4e-27 127.1 305 35.1
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 1.0e-25 122.9 677 26.3
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 1.3e-25 122.5 701 28.7
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 2.3e-25 121.7 703 27.7
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 2.3e-25 121.7 775 27.4
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 3.0e-25 121.3 762 27.0
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 1.5e-24 119.0 687 27.7
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 3.6e-23 114.4 716 27.1
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 4.7e-23 114.0 696 26.6
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 3.1e-22 111.3 792 25.0
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 1.5e-21 109.0 713 27.9
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 7.6e-21 106.7 790 25.2
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 7.6e-21 106.7 545 28.6
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 1.3e-20 105.9 779 25.3
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 1.1e-19 102.8 706 26.1
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 3.2e-19 101.3 729 26.2
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 4.1e-19 100.9 774 26.9
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 9.2e-19 99.8 695 27.1
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 7.8e-18 96.7 673 26.4
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 2.3e-17 95.1 697 24.4
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 8.1e-15 86.7 704 24.7
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 2.0e-13 82.0 734 24.8
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 3.4e-13 81.3 789 24.8
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 9.9e-13 79.7 172 38.4
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 7.1e-11 73.6 575 23.8
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 3.6e-07 61.2 639 24.1
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 1.1e-06 59.7 634 24.3
HPP92_028056 Vanilla planifolia HOM05D005664 ORTHO05D006509 9.0e-06 56.6 175 35.4


User provided reference genes

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