Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32564 Brassica carinata HOM05D008733 ORTHO05D010810 4.9e-53 211.1 122 100.0
BcaNung05834 Brassica carinata HOM05D008733 ORTHO05D010810 3.5e-43 178.3 106 100.0
BcaC06g32410 Brassica carinata HOM05D008733 ORTHO05D024404 2.2e-29 132.5 142 62.7
C09p69800 Brassica napus HOM05D008733 ORTHO05D024404 2.2e-29 132.5 142 62.7
BolC9t59724H Brassica oleracea HOM05D008733 ORTHO05D024404 2.2e-29 132.5 142 62.7
A10p29420 Brassica napus HOM05D008733 ORTHO05D024404 1.3e-26 123.2 141 55.3
BraA10t44986Z Brassica rapa HOM05D008733 ORTHO05D024404 3.1e-23 112.1 142 52.8
BcaB05g21666 Brassica carinata HOM05D008733 ORTHO05D010810 3.5e-11 72.0 85 45.9
BcaC03g13165 Brassica carinata HOM05D000307 ORTHO05D000166 1.8e-10 69.7 72 51.4
C02p02730 Brassica napus HOM05D000307 ORTHO05D000166 1.8e-10 69.7 72 51.4
BolC2t06238H Brassica oleracea HOM05D000307 ORTHO05D000166 1.8e-10 69.7 72 51.4
BcaC06g32357 Brassica carinata HOM05D008733 ORTHO05D010810 8.7e-10 67.4 104 41.3
BraA02t04882Z Brassica rapa HOM05D000307 ORTHO05D000166 2.5e-09 65.9 72 47.2
Sp6g36360 Schrenkiella parvula HOM05D008733 ORTHO05D010810 2.5e-09 65.9 78 46.2
BcaC06g32568 Brassica carinata HOM05D008733 ORTHO05D010810 7.4e-09 64.3 104 40.4
BcaC06g32569 Brassica carinata HOM05D008733 ORTHO05D010810 3.7e-08 62.0 104 39.4
BcaC06g32344 Brassica carinata HOM05D008733 ORTHO05D010810 4.8e-08 61.6 100 40.0
BolC9t59802H Brassica oleracea HOM05D008733 ORTHO05D010810 4.8e-08 61.6 100 40.0
A10p30160 Brassica napus HOM05D008733 ORTHO05D010810 1.8e-07 59.7 99 40.4
C09p70570 Brassica napus HOM05D008733 ORTHO05D010810 1.8e-07 59.7 99 40.4
BraA10t45054Z Brassica rapa HOM05D008733 ORTHO05D010810 1.8e-07 59.7 99 40.4
Thhalv10016044m.g Eutrema salsugineum HOM05D000307 ORTHO05D010810 2.4e-07 59.3 79 40.5
A10p29910 Brassica napus HOM05D008733 ORTHO05D010810 4.0e-07 58.5 75 45.3
BraA10t45030Z Brassica rapa HOM05D008733 ORTHO05D010810 4.0e-07 58.5 75 45.3
C09p70280 Brassica napus HOM05D008733 ORTHO05D010810 6.9e-07 57.8 75 45.3
C09p70310 Brassica napus HOM05D008733 ORTHO05D010810 6.9e-07 57.8 75 45.3
BolC9t59772H Brassica oleracea HOM05D008733 ORTHO05D010810 6.9e-07 57.8 75 45.3
BolC9t59774H Brassica oleracea HOM05D008733 ORTHO05D010810 6.9e-07 57.8 75 45.3
BolC9t59776H Brassica oleracea HOM05D008733 ORTHO05D010810 6.9e-07 57.8 75 45.3
BraA10t43005Z Brassica rapa HOM05D008733 ORTHO05D010810 3.4e-06 55.5 91 38.5
BraA10t43009Z Brassica rapa HOM05D008733 ORTHO05D010810 3.4e-06 55.5 91 38.5
A10p09200 Brassica napus HOM05D008733 ORTHO05D010810 5.8e-06 54.7 91 37.4


User provided reference genes

Program Settings