Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.5e-303 1045.4 550 100.0
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 2.0e-287 991.9 553 94.9
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 3.3e-282 974.5 553 92.8
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 2.6e-279 964.9 553 91.7
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 7.8e-276 953.4 550 90.5
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.3e-275 952.6 550 90.9
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 1.3e-275 952.6 550 90.5
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 5.6e-266 920.6 550 89.8
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 5.6e-266 920.6 550 89.8
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 1.6e-265 919.1 550 89.6
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.4e-264 916.0 550 89.3
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.4e-264 916.0 550 89.3
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.9e-258 895.6 551 86.4
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.8e-243 845.9 566 79.9
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 4.7e-212 741.5 571 70.9
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.2e-210 736.9 565 70.6
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.5e-210 736.5 566 70.7
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 2.6e-210 735.7 565 70.3
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 5.7e-210 734.6 571 68.8
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 6.3e-209 731.1 571 69.4
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 1.7e-206 723.0 571 68.1
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 2.9e-206 722.2 561 69.2
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 5.5e-205 718.0 571 68.0
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 2.7e-204 715.7 571 68.5
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 2.7e-204 715.7 557 67.5
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.0e-203 713.8 566 68.4
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 4.0e-203 711.8 567 68.3
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 4.0e-203 711.8 562 67.3
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 8.8e-203 710.7 555 67.7
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.2e-202 710.3 559 69.1
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.5e-202 709.9 557 67.7
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 3.4e-202 708.8 575 66.6
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.4e-202 708.8 557 67.5
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 4.4e-202 708.4 566 66.4
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 2.8e-201 705.7 576 66.5
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 4.8e-201 704.9 559 66.7
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 6.3e-201 704.5 570 67.2
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.1e-200 702.2 570 66.1
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 4.1e-200 701.8 570 66.1
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 5.4e-200 701.4 567 65.6
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 4.5e-199 698.4 565 68.0
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.3e-198 696.8 558 67.9
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.8e-198 695.3 557 66.4
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.5e-197 692.6 559 67.1
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 5.5e-197 691.4 560 65.2
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 9.5e-197 690.6 560 66.8
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 1.2e-196 690.3 563 65.7
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.6e-196 689.9 565 66.9
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 3.6e-196 688.7 561 65.6
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 4.7e-196 688.3 573 65.3
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.0e-195 687.2 560 64.8
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.0e-195 687.2 566 66.1
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.5e-194 683.3 553 66.0
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 4.4e-194 681.8 553 67.1
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.3e-193 680.2 586 63.3
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 2.2e-193 679.5 561 65.2
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 3.7e-193 678.7 567 64.4
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 4.9e-193 678.3 565 63.5
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.4e-192 676.8 560 65.7
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 2.4e-192 676.0 574 62.9
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 4.1e-192 675.2 563 65.0
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 5.4e-192 674.9 559 65.5
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 7.0e-192 674.5 570 63.2
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.6e-191 673.3 566 63.6
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.6e-191 673.3 563 63.2
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 4.5e-191 671.8 565 65.3
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 7.8e-191 671.0 553 65.5
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 1.0e-190 670.6 561 64.5
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.0e-190 670.6 555 64.9
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 1.3e-190 670.2 565 63.5
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.7e-190 669.8 569 61.9
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 3.8e-190 668.7 555 64.0
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 5.0e-190 668.3 566 62.7
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 5.6e-189 664.8 560 63.9
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 5.6e-189 664.8 595 61.3
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.2e-188 663.7 560 64.3
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.8e-187 659.8 568 63.4
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 2.0e-186 656.4 572 62.8
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.3e-185 653.7 576 60.8
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 1.7e-185 653.3 632 57.8
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 5.4e-184 648.3 557 63.6
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 6.6e-182 641.3 567 61.9
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 6.2e-172 608.2 559 61.0
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.3e-171 606.3 524 63.0
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.1e-171 605.9 568 59.9
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 5.2e-171 605.1 556 59.9
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 8.9e-171 604.4 565 58.1
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 6.4e-169 598.2 569 57.5
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.1e-168 597.4 531 63.3
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 1.2e-164 583.9 576 54.3
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 5.2e-163 578.6 562 55.7
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 5.2e-163 578.6 479 66.2
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 8.4e-161 571.2 635 52.6
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 5.1e-158 562.0 510 59.8
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.3e-150 537.3 478 59.6
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 2.4e-144 516.5 403 68.0
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.4e-120 437.6 549 45.5
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 5.5e-120 435.6 583 43.1
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 3.6e-119 433.0 450 57.3
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.7e-105 387.5 397 58.9
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 3.6e-103 379.8 581 38.6
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 7.7e-98 362.1 551 39.9
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 7.2e-96 355.5 587 38.0
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 8.8e-94 348.6 224 74.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.7e-92 344.4 237 72.2
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 6.8e-86 322.4 291 64.3
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.3e-81 308.1 305 60.7
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 2.3e-78 297.4 248 66.5
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.4e-67 261.5 264 53.8
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 2.4e-67 260.8 236 56.8
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 2.9e-60 237.3 376 44.4
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 3.7e-52 210.3 152 73.7
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.1e-48 198.7 581 27.4
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 3.2e-43 180.6 224 50.0
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 1.7e-33 148.3 149 56.4
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 2.8e-31 141.0 157 55.4
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.5e-26 124.0 71 77.5
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 5.5e-11 73.6 54 72.2
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 6.3e-07 60.1 40 70.0
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.4e-06 58.9 66 56.1


User provided reference genes

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