Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 5.3e-65 251.1 153 100.0
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 5.3e-65 251.1 153 100.0
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 3.1e-57 225.3 152 92.1
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 4.1e-49 198.4 153 77.1
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 2.2e-47 192.6 149 75.8
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 6.8e-44 181.0 153 60.1
BcaC03g15315 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-43 179.9 144 81.9
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 1.8e-41 172.9 103 78.6
BcaB08g34442 Brassica carinata HOM05D007693 ORTHO05D002086 2.6e-35 152.5 94 74.5
BcaB01g01697 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-30 136.7 100 100.0
BcaB04g21077 Brassica carinata HOM05D007693 ORTHO05D090374 1.5e-30 136.7 100 100.0
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.2e-27 127.1 145 43.4
BcaB06g26998 Brassica carinata HOM05D007693 ORTHO05D002086 9.5e-22 107.5 103 83.5
Sp1g34950 Schrenkiella parvula HOM05D007693 ORTHO05D002086 5.8e-19 98.2 150 49.3
Thhalv10011039m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.3e-18 97.1 94 53.2
Sp7g13130 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.2e-18 96.3 159 48.4
BcaC02g11475 Brassica carinata HOM05D007693 ORTHO05D002086 3.7e-18 95.5 95 49.5
Thhalv10003362m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 3.7e-18 95.5 87 56.3
Sp5g15320 Schrenkiella parvula HOM05D007693 ORTHO05D002086 3.7e-18 95.5 105 49.5
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 6.4e-18 94.7 67 65.7
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 1.1e-17 94.0 96 46.9
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 3.2e-17 92.4 90 52.2
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 3.2e-17 92.4 90 52.2
BcaC01g00556 Brassica carinata HOM05D007693 ORTHO05D002086 5.4e-17 91.7 90 52.2
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 7.1e-17 91.3 75 56.0
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 7.1e-17 91.3 89 55.1
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 9.2e-17 90.9 103 47.6
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 9.2e-17 90.9 103 47.6
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 1.6e-16 90.1 67 61.2
CARHR108830 Cardamine hirsuta HOM05D007693 ORTHO05D002086 1.6e-16 90.1 91 52.7
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 3.5e-16 89.0 96 44.8
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 3.5e-16 89.0 103 46.6
CARHR055980 Cardamine hirsuta HOM05D007693 ORTHO05D002086 3.5e-16 89.0 91 50.5
BcaC06g36209 Brassica carinata HOM05D000977 ORTHO05D002086 6.0e-16 88.2 96 49.0
BcaC08g44290 Brassica carinata HOM05D007693 ORTHO05D002086 1.0e-15 87.4 96 46.9
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 2.3e-15 86.3 91 48.4
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 2.3e-15 86.3 90 50.0
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 2.3e-15 86.3 88 50.0
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 3.0e-15 85.9 81 55.6
BcaC06g35712 Brassica carinata HOM05D007693 ORTHO05D002086 5.1e-15 85.1 72 62.5
BolC3t20530H Brassica oleracea HOM05D007693 ORTHO05D002086 5.1e-15 85.1 64 60.9
Carub.0003s3077 Capsella rubella HOM05D007693 ORTHO05D002086 5.1e-15 85.1 91 49.5
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 6.6e-15 84.7 74 63.5
Thhalv10003330m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.1e-14 84.0 87 50.6
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-14 83.6 95 48.4
C09p24970 Brassica napus HOM05D007693 ORTHO05D002086 1.5e-14 83.6 90 50.0
BraA06t25204Z Brassica rapa HOM05D007693 ORTHO05D002086 5.6e-14 81.6 70 55.7
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 9.5e-14 80.9 142 43.7
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 9.5e-14 80.9 90 43.3
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.2e-13 80.5 90 46.7
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.2e-13 80.5 90 46.7
BcaC05g28526 Brassica carinata HOM05D000977 ORTHO05D002086 1.2e-13 80.5 64 59.4
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 1.6e-13 80.1 87 50.6
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.1e-13 79.7 90 45.6
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.7e-13 78.6 142 40.1
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.7e-13 78.6 142 40.1
Sp6g12290 Schrenkiella parvula HOM05D007693 ORTHO05D002086 4.7e-13 78.6 103 42.7
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 8.1e-13 77.8 90 45.6
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 2.3e-12 76.3 70 54.3
Sp7g12150 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.3e-12 76.3 90 44.4
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.2e-11 73.9 91 44.0
C05p36680 Brassica napus HOM05D007693 ORTHO05D002086 2.0e-11 73.2 89 46.1
Thhalv10002853m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.0e-11 73.2 91 44.0
BcaB04g18049 Brassica carinata HOM05D007693 ORTHO05D015462 2.6e-11 72.8 153 34.6
BcaC06g36717 Brassica carinata HOM05D000977 ORTHO05D002086 3.4e-11 72.4 62 58.1
BraA10t43661Z Brassica rapa HOM05D007693 ORTHO05D002086 4.4e-11 72.0 76 50.0
Carub.0008s0706 Capsella rubella HOM05D007693 ORTHO05D002086 1.3e-10 70.5 94 40.4
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 2.2e-10 69.7 85 43.5
BcaB08g35719 Brassica carinata HOM05D007693 ORTHO05D002086 2.9e-10 69.3 72 50.0
C05p48940 Brassica napus HOM05D007693 ORTHO05D002086 2.9e-10 69.3 86 46.5
Sp5g21400 Schrenkiella parvula HOM05D018387 ORTHO05D002086 2.9e-10 69.3 73 50.7
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 6.4e-10 68.2 90 44.4
AT2G07505 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 6.4e-10 68.2 90 43.3
Sp6g09820 Schrenkiella parvula HOM05D007693 ORTHO05D002086 8.4e-10 67.8 57 56.1
Sp7g03170 Schrenkiella parvula HOM05D018387 ORTHO05D002086 8.4e-10 67.8 57 57.9
BolC5t32402H Brassica oleracea HOM05D007693 ORTHO05D002086 1.1e-09 67.4 77 48.1
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 2.4e-09 66.2 74 47.3
BcaB04g17442 Brassica carinata HOM05D007693 ORTHO05D002086 5.4e-09 65.1 90 40.0
THA.LOC104817596 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 5.4e-09 65.1 104 38.5
BcaB06g26026 Brassica carinata HOM05D007693 ORTHO05D002086 7.1e-09 64.7 88 45.5
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 7.1e-09 64.7 144 34.7
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 7.1e-09 64.7 144 34.0
Sp6g08580 Schrenkiella parvula HOM05D018387 ORTHO05D002086 7.1e-09 64.7 75 45.3
BraA07t28690Z Brassica rapa HOM05D007462 ORTHO05D002086 7.8e-08 61.2 64 48.4
BcaC06g33699 Brassica carinata HOM05D007462 ORTHO05D011074 1.0e-07 60.8 57 52.6
THA.LOC104806974 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 1.7e-07 60.1 59 49.2
BcaB04g17689 Brassica carinata HOM05D007462 ORTHO05D002086 3.0e-07 59.3 59 47.5
BcaB07g33915 Brassica carinata HOM05D007693 ORTHO05D015462 3.0e-07 59.3 153 32.7
BcaB06g26931 Brassica carinata HOM05D007693 ORTHO05D015462 3.9e-07 58.9 75 44.0
CARHR264280 Cardamine hirsuta HOM05D007462 ORTHO05D011074 3.9e-07 58.9 82 42.7
BraA01t02729Z Brassica rapa HOM05D007462 ORTHO05D002086 5.1e-07 58.5 56 50.0
BraA02t08314Z Brassica rapa HOM05D007462 ORTHO05D002086 5.1e-07 58.5 56 50.0
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 6.6e-07 58.2 85 37.6
BcaB04g19811 Brassica carinata HOM05D007462 ORTHO05D002086 6.6e-07 58.2 60 45.0
BcaB06g26738 Brassica carinata HOM05D007462 ORTHO05D002086 6.6e-07 58.2 59 47.5
BcaB05g24191 Brassica carinata HOM05D000675 ORTHO05D002086 8.6e-07 57.8 91 37.4
BcaC01g04891 Brassica carinata HOM05D007462 ORTHO05D011074 8.6e-07 57.8 57 49.1
C04p58390 Brassica napus HOM05D007462 ORTHO05D002086 8.6e-07 57.8 59 45.8
BolC6t36760H Brassica oleracea HOM05D007462 ORTHO05D002086 8.6e-07 57.8 59 45.8
BraA08t34216Z Brassica rapa HOM05D007693 ORTHO05D002086 8.6e-07 57.8 47 63.8
BcaC01g02140 Brassica carinata HOM05D007462 ORTHO05D002086 1.1e-06 57.4 54 51.9
BolC3t19061H Brassica oleracea HOM05D007462 ORTHO05D002086 1.1e-06 57.4 54 51.9
BolC8t49549H Brassica oleracea HOM05D007693 ORTHO05D002086 1.1e-06 57.4 53 58.5
Thhalv10022239m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.1e-06 57.4 74 43.2
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 1.5e-06 57.0 57 45.6
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 1.5e-06 57.0 57 47.4
BcaC06g36027 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-06 57.0 54 51.9
BcaC08g44171 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-06 57.0 59 45.8
BraA05t20011Z Brassica rapa HOM05D007462 ORTHO05D002086 1.5e-06 57.0 89 37.1
BcaC05g27596 Brassica carinata HOM05D000675 ORTHO05D002086 1.9e-06 56.6 97 36.1
BcaNung00058 Brassica carinata HOM05D007462 ORTHO05D011074 1.9e-06 56.6 90 34.4
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 1.9e-06 56.6 102 34.3
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 2.5e-06 56.2 57 47.4
BcaC02g07772 Brassica carinata HOM05D007462 ORTHO05D002086 2.5e-06 56.2 54 51.9
BcaC03g14955 Brassica carinata HOM05D007462 ORTHO05D002086 2.5e-06 56.2 54 51.9
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 2.5e-06 56.2 57 47.4
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 2.5e-06 56.2 57 47.4
BcaC08g44148 Brassica carinata HOM05D007462 ORTHO05D011074 2.5e-06 56.2 57 49.1
BolC4t27363H Brassica oleracea HOM05D007462 ORTHO05D002086 2.5e-06 56.2 59 44.1
AT3G30165 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 3.3e-06 55.8 57 45.6
BcaC01g02056 Brassica carinata HOM05D007462 ORTHO05D002086 3.3e-06 55.8 54 50.0
BcaC03g17084 Brassica carinata HOM05D007462 ORTHO05D011074 3.3e-06 55.8 57 49.1
BolC2t08565H Brassica oleracea HOM05D007462 ORTHO05D002086 3.3e-06 55.8 54 50.0
BraA05t21229Z Brassica rapa HOM05D007462 ORTHO05D002086 3.3e-06 55.8 59 45.8
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 4.3e-06 55.5 57 47.4
BcaC05g25703 Brassica carinata HOM05D000675 ORTHO05D002086 5.6e-06 55.1 97 37.1
BcaC08g42855 Brassica carinata HOM05D000675 ORTHO05D002086 5.6e-06 55.1 97 37.1
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 5.6e-06 55.1 89 36.0
BcaB07g32893 Brassica carinata HOM05D000675 ORTHO05D002086 7.3e-06 54.7 76 42.1
BcaC08g45815 Brassica carinata HOM05D007462 ORTHO05D011074 7.3e-06 54.7 57 45.6
BcaC02g11566 Brassica carinata HOM05D007462 ORTHO05D011074 9.6e-06 54.3 56 44.6
BcaC03g14143 Brassica carinata HOM05D007462 ORTHO05D011074 9.6e-06 54.3 56 46.4
BcaC04g22963 Brassica carinata HOM05D007462 ORTHO05D011074 9.6e-06 54.3 57 47.4
BolC1t01191H Brassica oleracea HOM05D007462 ORTHO05D002086 9.6e-06 54.3 54 50.0
BolC9t54236H Brassica oleracea HOM05D007462 ORTHO05D011074 9.6e-06 54.3 57 47.4


User provided reference genes

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