Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32491 Brassica carinata HOM05D000124 ORTHO05D000056 1.1e-53 213.0 101 100.0
C09p69690 Brassica napus HOM05D000124 ORTHO05D000056 5.5e-34 147.5 70 100.0
BolC9t59712H Brassica oleracea HOM05D000124 ORTHO05D000056 5.5e-34 147.5 70 100.0
BcaC06g32492 Brassica carinata HOM05D000124 ORTHO05D000056 1.2e-33 146.4 70 98.6
A10p29320 Brassica napus HOM05D000124 ORTHO05D000056 1.2e-33 146.4 70 98.6
BraA10t44976Z Brassica rapa HOM05D000124 ORTHO05D000056 1.2e-33 146.4 70 98.6
BcaC06g32422 Brassica carinata HOM05D000124 ORTHO05D000056 1.1e-31 139.8 66 100.0
Thhalv10014666m.g Eutrema salsugineum HOM05D000124 ORTHO05D000056 4.1e-29 131.3 70 84.3
AL6G17890 Arabidopsis lyrata HOM05D000124 ORTHO05D000056 3.8e-27 124.8 70 85.7
AT5G07580 Arabidopsis thaliana HOM05D000124 ORTHO05D000056 2.5e-26 122.1 70 84.3
Carub.0006s0656 Capsella rubella HOM05D000124 ORTHO05D000056 7.2e-26 120.6 70 81.4
Sp6g35290 Schrenkiella parvula HOM05D000124 ORTHO05D000056 7.9e-25 117.1 70 81.4
Aa31LG3G18840 Aethionema arabicum HOM05D000124 ORTHO05D000056 2.0e-23 112.5 70 77.1
BcaB05g21606 Brassica carinata HOM05D000124 ORTHO05D000056 1.7e-22 109.4 62 83.9
BcaB05g21608 Brassica carinata HOM05D000124 ORTHO05D000056 1.7e-22 109.4 62 83.9
CARHR205570 Cardamine hirsuta HOM05D000124 ORTHO05D000056 2.8e-22 108.6 70 74.3
BcaC03g13195 Brassica carinata HOM05D000124 ORTHO05D000056 6.3e-22 107.5 58 84.5
C02p03210 Brassica napus HOM05D000124 ORTHO05D000056 6.3e-22 107.5 58 84.5
BolC2t06284H Brassica oleracea HOM05D000124 ORTHO05D000056 6.3e-22 107.5 58 84.5
Thhalv10005285m.g Eutrema salsugineum HOM05D000124 ORTHO05D000056 2.5e-18 95.5 71 64.8
Sp2g24800 Schrenkiella parvula HOM05D000124 ORTHO05D000056 3.2e-18 95.1 71 66.2
AT5G61590 Arabidopsis thaliana HOM05D000124 ORTHO05D000056 3.6e-17 91.7 70 64.3
CARHR275380 Cardamine hirsuta HOM05D000124 ORTHO05D000056 4.7e-17 91.3 71 62.0
THA.LOC104801608 Tarenaya hassleriana HOM05D000124 ORTHO05D000056 7.9e-17 90.5 65 66.2
BolC7t45052H Brassica oleracea HOM05D000124 ORTHO05D000056 1.0e-16 90.1 71 64.8
A09p07350 Brassica napus HOM05D000124 ORTHO05D000056 3.0e-16 88.6 71 63.4
BraA03t13847Z Brassica rapa HOM05D000124 ORTHO05D000056 3.0e-16 88.6 71 63.4
BraA09t36390Z Brassica rapa HOM05D000124 ORTHO05D000056 3.0e-16 88.6 71 63.4
BraA02t04925Z Brassica rapa HOM05D000124 ORTHO05D000056 3.9e-16 88.2 58 75.9
A03p47190 Brassica napus HOM05D000124 ORTHO05D000056 5.1e-16 87.8 71 63.4
Carub.0008s2228 Capsella rubella HOM05D000124 ORTHO05D000056 6.7e-16 87.4 71 60.6
BcaNung01425 Brassica carinata HOM05D000124 ORTHO05D000056 1.5e-15 86.3 71 62.0
C07p45290 Brassica napus HOM05D000124 ORTHO05D000056 2.0e-15 85.9 71 62.0
BcaC04g23442 Brassica carinata HOM05D000124 ORTHO05D000056 3.3e-15 85.1 71 60.6
AL1041U10010 Arabidopsis lyrata HOM05D000124 ORTHO05D000056 7.4e-15 84.0 71 62.0
AL8G38320 Arabidopsis lyrata HOM05D000124 ORTHO05D000056 7.4e-15 84.0 71 62.0
C09p08290 Brassica napus HOM05D000124 ORTHO05D000056 4.8e-14 81.3 71 59.2
BolC9t53739H Brassica oleracea HOM05D000124 ORTHO05D000056 4.8e-14 81.3 71 59.2
THA.LOC104818307 Tarenaya hassleriana HOM05D000124 ORTHO05D000056 1.0e-11 73.6 62 59.7
Duzib205G1025 Durio zibethinus HOM05D000124 ORTHO05D000056 9.7e-07 57.0 78 41.0


User provided reference genes

Program Settings