Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32488 Brassica carinata HOM05D021341 ORTHO05D093304 1.2e-75 288.1 482 100.0
A10p29270 Brassica napus HOM05D021341 ORTHO05D024077 2.4e-31 141.0 164 70.7
BraA10t44973Z Brassica rapa HOM05D021341 ORTHO05D024077 2.4e-31 141.0 164 70.7
BcaC06g32425 Brassica carinata HOM05D021341 ORTHO05D024077 5.6e-28 129.8 164 73.2
C09p69660 Brassica napus HOM05D021341 ORTHO05D024077 5.6e-28 129.8 164 73.2
BolC9t59709H Brassica oleracea HOM05D021341 ORTHO05D024077 5.6e-28 129.8 164 73.2
Sp6g35340 Schrenkiella parvula HOM05D007846 ORTHO05D371621 1.9e-23 114.8 81 76.5
C03p03790 Brassica napus HOM05D007846 ORTHO05D010837 6.7e-21 106.3 142 56.3
A03p03350 Brassica napus HOM05D007846 ORTHO05D010837 8.7e-21 105.9 142 56.3
Thhalv10013795m.g Eutrema salsugineum HOM05D007846 ORTHO05D195878 1.2e-17 95.5 99 58.6
BcaB01g06046 Brassica carinata HOM05D007846 ORTHO05D010837 7.6e-17 92.8 68 75.0
BcaB01g06047 Brassica carinata HOM05D007846 ORTHO05D010837 7.6e-17 92.8 117 56.4
BolC3t12914H Brassica oleracea HOM05D007846 ORTHO05D010837 7.6e-17 92.8 68 75.0
CARHR205620 Cardamine hirsuta HOM05D007846 ORTHO05D010837 2.2e-16 91.3 80 60.0
BcaB01g06048 Brassica carinata HOM05D007846 ORTHO05D010837 6.5e-16 89.7 68 76.5
BcaB01g05692 Brassica carinata HOM05D007846 ORTHO05D010837 8.4e-16 89.4 121 52.9
AT5G07530 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 3.2e-15 87.4 81 61.7
C09p69650 Brassica napus HOM05D007846 ORTHO05D010837 3.2e-15 87.4 81 63.0
BolC9t59708H Brassica oleracea HOM05D007846 ORTHO05D010837 3.2e-15 87.4 81 63.0
AL6G17840 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 5.5e-15 86.7 77 66.2
Carub.0006s0651 Capsella rubella HOM05D007846 ORTHO05D010837 1.2e-14 85.5 78 62.8
Sp6g35350 Schrenkiella parvula HOM05D007846 ORTHO05D010837 2.7e-14 84.3 82 57.3
BcaB05g21610 Brassica carinata HOM05D007846 ORTHO05D010837 1.0e-13 82.4 83 57.8
BraA02t04922Z Brassica rapa HOM05D007846 ORTHO05D010837 1.0e-13 82.4 88 56.8
BcaC03g13197 Brassica carinata HOM05D007846 ORTHO05D010837 1.3e-13 82.0 88 56.8
C02p03180 Brassica napus HOM05D007846 ORTHO05D010837 1.3e-13 82.0 88 56.8
BolC2t06280H Brassica oleracea HOM05D007846 ORTHO05D010837 1.3e-13 82.0 88 56.8
Thhalv10014587m.g Eutrema salsugineum HOM05D007846 ORTHO05D010837 1.3e-13 82.0 76 61.8
Thhalv10014560m.g Eutrema salsugineum HOM05D007846 ORTHO05D010837 5.1e-13 80.1 76 59.2
BcaC06g32486 Brassica carinata HOM05D007846 ORTHO05D010837 6.7e-13 79.7 67 67.2
BcaC06g32428 Brassica carinata HOM05D007846 ORTHO05D010837 8.7e-13 79.3 67 68.7
C09p69640 Brassica napus HOM05D007846 ORTHO05D010837 8.7e-13 79.3 67 68.7
BolC9t59707H Brassica oleracea HOM05D007846 ORTHO05D010837 8.7e-13 79.3 67 68.7
A10p29250 Brassica napus HOM05D007846 ORTHO05D010837 2.5e-12 77.8 67 68.7
BraA10t44971Z Brassica rapa HOM05D007846 ORTHO05D010837 2.5e-12 77.8 67 68.7
BcaC06g32487 Brassica carinata HOM05D007846 ORTHO05D010837 3.3e-12 77.4 67 64.2
A03p03340 Brassica napus HOM05D007846 ORTHO05D010837 9.7e-12 75.9 68 64.7
BolC8t49462H Brassica oleracea HOM05D007846 ORTHO05D010837 9.7e-12 75.9 66 65.2
BraA03t09686Z Brassica rapa HOM05D007846 ORTHO05D010837 9.7e-12 75.9 68 64.7
BraA08t34994Z Brassica rapa HOM05D007846 ORTHO05D010837 9.7e-12 75.9 66 65.2
C08p18270 Brassica napus HOM05D007846 ORTHO05D010837 1.3e-11 75.5 66 65.2
Carub.0006s0650 Capsella rubella HOM05D007846 ORTHO05D010837 2.2e-11 74.7 77 58.4
BcaC03g13199 Brassica carinata HOM05D007846 ORTHO05D010837 8.2e-11 72.8 111 43.2
C02p03150 Brassica napus HOM05D007846 ORTHO05D010837 8.2e-11 72.8 111 43.2
AL6G17910 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 1.1e-10 72.4 77 57.1
Carub.0006s0658 Capsella rubella HOM05D007846 ORTHO05D010837 1.4e-10 72.0 77 55.8
BraA02t04921Z Brassica rapa HOM05D007846 ORTHO05D010837 3.1e-10 70.9 67 56.7
AL6G17830 Arabidopsis lyrata HOM05D007846 ORTHO05D010837 6.9e-10 69.7 77 54.5
AT5G07600 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 1.2e-09 68.9 77 54.5
AT5G07520 Arabidopsis thaliana HOM05D007846 ORTHO05D010837 2.0e-09 68.2 77 53.2
BolC2t06277H Brassica oleracea HOM05D007846 ORTHO05D010837 2.0e-09 68.2 108 42.6
Thhalv10015090m.g Eutrema salsugineum HOM05D007846 ORTHO05D000624 2.6e-09 67.8 59 66.1
Sp6g35330 Schrenkiella parvula HOM05D007846 ORTHO05D021761 3.4e-09 67.4 95 47.4
Carub.0006s0653 Capsella rubella HOM05D007846 ORTHO05D000624 5.9e-09 66.6 59 59.3
AT5G07510 Arabidopsis thaliana HOM05D007846 ORTHO05D038626 1.0e-08 65.9 73 54.8
AL6G17850 Arabidopsis lyrata HOM05D007846 ORTHO05D031404 1.3e-08 65.5 66 51.5
Aa31LG3G18860 Aethionema arabicum HOM05D007846 ORTHO05D000624 1.7e-08 65.1 64 54.7
AT5G07540 Arabidopsis thaliana HOM05D007846 ORTHO05D031404 1.7e-08 65.1 66 53.0
Thhalv10015089m.g Eutrema salsugineum HOM05D000805 ORTHO05D000624 6.5e-08 63.2 59 62.7
AL6G17860 Arabidopsis lyrata HOM05D007846 ORTHO05D000624 1.1e-07 62.4 59 55.9
Aa31LG3G18890 Aethionema arabicum HOM05D007846 ORTHO05D010837 1.9e-07 61.6 99 42.4
AT5G07550 Arabidopsis thaliana HOM05D007846 ORTHO05D000624 2.5e-07 61.2 59 55.9
BcaC06g32423 Brassica carinata HOM05D007846 ORTHO05D023961 2.5e-07 61.2 58 58.6
A10p29310 Brassica napus HOM05D007846 ORTHO05D023961 2.5e-07 61.2 58 58.6
C09p69680 Brassica napus HOM05D007846 ORTHO05D023961 2.5e-07 61.2 58 58.6
BolC9t59711H Brassica oleracea HOM05D007846 ORTHO05D023961 2.5e-07 61.2 58 58.6
BraA10t44975Z Brassica rapa HOM05D007846 ORTHO05D023961 2.5e-07 61.2 58 58.6
Sp6g35310 Schrenkiella parvula HOM05D007846 ORTHO05D000624 2.5e-07 61.2 59 55.9
Sp6g35320 Schrenkiella parvula HOM05D000805 ORTHO05D000624 2.5e-07 61.2 59 61.0
CARHR205610 Cardamine hirsuta HOM05D007846 ORTHO05D000624 3.2e-07 60.8 60 56.7
BcaB01g06049 Brassica carinata HOM05D007846 ORTHO05D000624 4.2e-07 60.5 59 57.6
BolC3t12915H Brassica oleracea HOM05D000805 ORTHO05D000624 4.2e-07 60.5 59 57.6
C03p03800 Brassica napus HOM05D000805 ORTHO05D000624 5.5e-07 60.1 59 57.6
AL6G17810 Arabidopsis lyrata HOM05D007846 ORTHO05D038626 7.2e-07 59.7 72 51.4
BraA03t09687Z Brassica rapa HOM05D000805 ORTHO05D000624 9.4e-07 59.3 59 57.6
A03p03360 Brassica napus HOM05D000805 ORTHO05D000624 3.6e-06 57.4 59 55.9
BcaC06g32490 Brassica carinata HOM05D007846 ORTHO05D000624 6.1e-06 56.6 59 54.2


User provided reference genes

Program Settings