Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32470 Brassica carinata HOM05D011591 ORTHO05D010376 1.9e-50 202.2 102 100.0
C09p69280 Brassica napus HOM05D011591 ORTHO05D010376 1.6e-41 172.6 96 91.7
BolC9t59672H Brassica oleracea HOM05D011591 ORTHO05D010376 1.6e-41 172.6 96 91.7
A10p28930 Brassica napus HOM05D011591 ORTHO05D010376 2.1e-41 172.2 96 90.6
BraA10t44940Z Brassica rapa HOM05D011591 ORTHO05D010376 2.1e-41 172.2 96 90.6
Thhalv10014931m.g Eutrema salsugineum HOM05D011591 ORTHO05D010376 2.9e-35 151.8 86 84.9
Sp6g35750 Schrenkiella parvula HOM05D011591 ORTHO05D010376 7.2e-34 147.1 86 82.6
AT5G07160 Arabidopsis thaliana HOM05D011591 ORTHO05D010376 5.5e-26 120.9 94 68.1
AL6G17350 Arabidopsis lyrata HOM05D011591 ORTHO05D010376 7.2e-26 120.6 94 67.0
Carub.0006s0608 Capsella rubella HOM05D011591 ORTHO05D010376 3.5e-20 101.7 63 76.2
THA.LOC104810699 Tarenaya hassleriana HOM05D011591 ORTHO05D010376 2.1e-17 92.4 84 57.1
QL01p039514 Quercus lobata HOM05D011591 ORTHO05D010376 3.9e-11 71.6 79 49.4
Hma1.2p1_1974F.1_g309630 Hydrangea macrophylla HOM05D010709 ORTHO05D010376 1.2e-09 66.6 49 59.2
Manes.18G136300 Manihot esculenta HOM05D011591 ORTHO05D010376 3.6e-09 65.1 59 54.2
CSS0041982 Camellia sinensis var. sinensis HOM05D010709 ORTHO05D010376 3.1e-08 62.0 91 38.5
Potri.009G075000 Populus trichocarpa HOM05D020455 ORTHO05D010376 4.0e-08 61.6 52 59.6
Sabra09G0056900 Salix brachista HOM05D011591 ORTHO05D010376 8.9e-08 60.5 52 57.7
MELO3C020524.2 Cucumis melo HOM05D039867 ORTHO05D010376 2.0e-07 59.3 43 65.1
Cfa011740 Carpinus fangiana HOM05D028161 ORTHO05D010376 4.4e-07 58.2 76 42.1
Thecc.09G353600 Theobroma cacao HOM05D020455 ORTHO05D010376 5.8e-07 57.8 79 48.1
ClCG03G000470 Citrullus lanatus HOM05D039867 ORTHO05D010376 7.5e-07 57.4 45 60.0
SHI19189 Sapria himalayana HOM05D011591 ORTHO05D010376 7.5e-07 57.4 80 43.8
Sed0000970 Sechium edule HOM05D011591 ORTHO05D010376 1.3e-06 56.6 43 60.5
Haze_24379 Corylus avellana HOM05D028161 ORTHO05D010376 1.7e-06 56.2 55 54.5
FvH4_3g39200 Fragaria vesca HOM05D040535 ORTHO05D010376 2.2e-06 55.8 48 60.4
FAN11G1101 Fragaria x ananassa HOM05D008445 ORTHO05D010376 2.2e-06 55.8 48 60.4
FAN21G0777 Fragaria x ananassa HOM05D002172 ORTHO05D010376 2.2e-06 55.8 48 60.4


User provided reference genes

Program Settings