Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32410 Brassica carinata HOM05D008733 ORTHO05D024404 6.5e-74 280.8 159 100.0
C09p69800 Brassica napus HOM05D008733 ORTHO05D024404 6.5e-74 280.8 159 100.0
BolC9t59724H Brassica oleracea HOM05D008733 ORTHO05D024404 6.5e-74 280.8 159 100.0
A10p29420 Brassica napus HOM05D008733 ORTHO05D024404 2.8e-61 238.8 160 84.4
BraA10t44986Z Brassica rapa HOM05D008733 ORTHO05D024404 8.3e-61 237.3 160 82.5
BcaC06g32564 Brassica carinata HOM05D008733 ORTHO05D010810 9.2e-28 127.5 142 62.7
BcaC06g32568 Brassica carinata HOM05D008733 ORTHO05D010810 1.6e-27 126.7 154 53.9
BcaC06g32357 Brassica carinata HOM05D008733 ORTHO05D010810 1.7e-26 123.2 154 52.6
BcaC06g32569 Brassica carinata HOM05D008733 ORTHO05D010810 5.6e-25 118.2 154 51.3
A10p29910 Brassica napus HOM05D008733 ORTHO05D010810 2.1e-24 116.3 129 58.1
BraA10t45030Z Brassica rapa HOM05D008733 ORTHO05D010810 2.1e-24 116.3 129 58.1
BcaNung05834 Brassica carinata HOM05D008733 ORTHO05D010810 1.4e-23 113.6 104 72.1
Sp6g36360 Schrenkiella parvula HOM05D008733 ORTHO05D010810 2.1e-19 99.8 173 42.2
C09p70310 Brassica napus HOM05D008733 ORTHO05D010810 3.0e-18 95.9 174 44.3
BolC9t59776H Brassica oleracea HOM05D008733 ORTHO05D010810 3.0e-18 95.9 174 44.3
BcaB05g21666 Brassica carinata HOM05D008733 ORTHO05D010810 5.1e-18 95.1 192 37.5
C09p70610 Brassica napus HOM05D008733 ORTHO05D010810 3.3e-17 92.4 129 44.2
BraA10t45058Z Brassica rapa HOM05D008733 ORTHO05D010810 3.3e-17 92.4 129 44.2
BraA10t43005Z Brassica rapa HOM05D008733 ORTHO05D010810 4.3e-17 92.0 132 43.9
BraA10t43009Z Brassica rapa HOM05D008733 ORTHO05D010810 4.3e-17 92.0 132 43.9
C09p70280 Brassica napus HOM05D008733 ORTHO05D010810 5.6e-17 91.7 174 43.7
BolC9t59772H Brassica oleracea HOM05D008733 ORTHO05D010810 5.6e-17 91.7 174 43.7
BcaC03g13165 Brassica carinata HOM05D000307 ORTHO05D000166 7.3e-17 91.3 194 37.1
BcaC06g32338 Brassica carinata HOM05D008733 ORTHO05D010810 7.3e-17 91.3 129 44.2
BcaC06g32342 Brassica carinata HOM05D008733 ORTHO05D010810 7.3e-17 91.3 129 44.2
C02p02730 Brassica napus HOM05D000307 ORTHO05D000166 7.3e-17 91.3 194 37.1
BolC2t06238H Brassica oleracea HOM05D000307 ORTHO05D000166 7.3e-17 91.3 194 37.1
BolC9t59802H Brassica oleracea HOM05D008733 ORTHO05D010810 7.3e-17 91.3 129 49.6
BolC9t59810H Brassica oleracea HOM05D008733 ORTHO05D010810 7.3e-17 91.3 129 44.2
BolC9t59817H Brassica oleracea HOM05D008733 ORTHO05D010810 7.3e-17 91.3 129 44.2
BcaC06g32343 Brassica carinata HOM05D008733 ORTHO05D010810 9.6e-17 90.9 129 44.2
A10p09280 Brassica napus HOM05D008733 ORTHO05D010810 1.6e-16 90.1 132 43.2
A10p09200 Brassica napus HOM05D008733 ORTHO05D010810 2.1e-16 89.7 132 43.2
BcaC06g32339 Brassica carinata HOM05D008733 ORTHO05D010810 2.8e-16 89.4 127 43.3
BcaC06g32344 Brassica carinata HOM05D008733 ORTHO05D010810 2.8e-16 89.4 129 48.8
BolC9t59805H Brassica oleracea HOM05D008733 ORTHO05D010810 2.8e-16 89.4 127 43.3
Thhalv10016044m.g Eutrema salsugineum HOM05D000307 ORTHO05D010810 3.6e-16 89.0 177 38.4
BolC9t59774H Brassica oleracea HOM05D008733 ORTHO05D010810 6.2e-16 88.2 104 55.8
BraA10t43001Z Brassica rapa HOM05D008733 ORTHO05D010810 6.2e-16 88.2 132 42.4
BraA10t45026Z Brassica rapa HOM05D016391 ORTHO05D024401 1.1e-15 87.4 101 48.5
BraA02t04882Z Brassica rapa HOM05D000307 ORTHO05D000166 9.0e-15 84.3 194 34.5
A10p30160 Brassica napus HOM05D008733 ORTHO05D010810 1.2e-14 84.0 129 49.6
C09p70570 Brassica napus HOM05D008733 ORTHO05D010810 1.2e-14 84.0 129 49.6
BraA10t45054Z Brassica rapa HOM05D008733 ORTHO05D010810 1.2e-14 84.0 129 49.6
BcaNung04848 Brassica carinata HOM05D016391 ORTHO05D024401 1.5e-14 83.6 63 71.4
A10p29880 Brassica napus HOM05D016391 ORTHO05D024401 5.8e-14 81.6 101 46.5
BolC9t59801H Brassica oleracea HOM05D016391 ORTHO05D023888 1.7e-13 80.1 143 46.2
A10p30150 Brassica napus HOM05D016391 ORTHO05D023888 1.4e-12 77.0 143 46.2
C09p70560 Brassica napus HOM05D016391 ORTHO05D023888 1.4e-12 77.0 143 46.2
BcaC06g32345 Brassica carinata HOM05D016391 ORTHO05D023888 3.5e-11 72.4 94 51.1
BcaNung05840 Brassica carinata HOM05D008733 ORTHO05D010810 1.7e-10 70.1 78 46.2
C09p71930 Brassica napus HOM05D030936 ORTHO05D027891 8.7e-10 67.8 137 41.6
BolC9t59811H Brassica oleracea HOM05D008733 ORTHO05D010810 1.3e-08 63.9 82 47.6
A10p09240 Brassica napus HOM05D012344 ORTHO05D014513 2.1e-08 63.2 111 47.7
A10p09250 Brassica napus HOM05D012344 ORTHO05D014513 2.1e-08 63.2 111 47.7
BolC9t59807H Brassica oleracea HOM05D012344 ORTHO05D014513 3.6e-08 62.4 103 46.6
BolC9t59812H Brassica oleracea HOM05D012344 ORTHO05D014513 3.6e-08 62.4 103 46.6
BolC9t59803H Brassica oleracea HOM05D012344 ORTHO05D014513 2.4e-07 59.7 103 45.6
BraA10t43003Z Brassica rapa HOM05D012344 ORTHO05D014513 2.4e-07 59.7 99 45.5
A10p09180 Brassica napus HOM05D012344 ORTHO05D014513 5.3e-07 58.5 106 45.3
A10p30180 Brassica napus HOM05D012344 ORTHO05D014513 6.9e-07 58.2 106 45.3
C09p70590 Brassica napus HOM05D012344 ORTHO05D014513 6.9e-07 58.2 106 45.3
BraA10t45056Z Brassica rapa HOM05D012344 ORTHO05D014513 6.9e-07 58.2 106 45.3
BolC9t59769H Brassica oleracea HOM05D045163 ORTHO05D024401 2.0e-06 56.6 60 45.0
A10p09260 Brassica napus HOM05D012344 ORTHO05D014513 2.6e-06 56.2 106 45.3
A10p09320 Brassica napus HOM05D012344 ORTHO05D014513 5.8e-06 55.1 106 44.3


User provided reference genes

Program Settings