Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 1.1e-277 959.5 545 100.0
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 1.1e-277 959.5 545 100.0
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 3.1e-277 958.0 545 99.8
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.2e-271 939.5 545 98.0
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.2e-271 939.5 545 98.0
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 2.5e-266 921.8 550 89.8
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 2.8e-257 891.7 553 87.0
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 2.3e-251 872.1 553 84.4
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 3.0e-251 871.7 553 84.6
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 5.2e-248 860.9 550 83.6
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 8.9e-248 860.1 550 83.1
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 8.9e-248 860.1 550 83.3
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 7.6e-239 830.5 548 81.8
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.0e-219 766.9 563 73.9
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.8e-192 676.4 565 65.5
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 5.3e-192 674.9 571 66.0
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 5.3e-192 674.9 571 63.7
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 6.9e-192 674.5 566 65.4
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 1.5e-191 673.3 565 65.0
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 2.0e-191 672.9 566 65.2
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 3.8e-190 668.7 561 64.9
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 3.8e-190 668.7 571 65.1
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 7.2e-189 664.5 555 64.5
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 2.3e-187 659.4 557 63.7
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 2.3e-187 659.4 571 62.7
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 6.7e-187 657.9 571 63.9
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 1.1e-186 657.1 555 64.3
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.5e-186 656.8 562 63.9
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.6e-186 656.0 555 64.9
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 3.3e-186 655.6 571 63.4
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 4.4e-186 655.2 567 64.0
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.4e-186 655.2 557 64.1
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 9.7e-186 654.1 557 63.9
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.3e-185 653.7 558 62.9
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 6.3e-185 651.4 573 63.0
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 8.2e-185 651.0 576 61.8
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.1e-184 650.6 570 63.5
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.1e-184 648.7 557 63.4
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.1e-184 648.7 570 62.8
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.6e-183 646.7 567 62.1
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 4.5e-183 645.2 562 63.2
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.0e-182 644.0 566 62.0
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 2.2e-182 642.9 560 63.0
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.2e-182 642.9 563 62.9
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 8.5e-182 641.0 560 62.5
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-181 640.6 549 63.2
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.1e-181 640.6 556 63.5
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 2.5e-181 639.4 565 63.7
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 3.2e-181 639.0 571 61.6
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.2e-180 637.1 558 63.3
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.1e-180 636.3 557 62.5
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 6.1e-180 634.8 561 62.7
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.0e-179 634.0 587 60.5
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 1.8e-179 633.3 564 60.6
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 1.8e-179 633.3 564 61.0
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 6.7e-179 631.3 546 62.5
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 6.7e-179 631.3 550 62.4
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 8.8e-179 630.9 561 61.7
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.5e-178 630.2 565 60.4
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 2.6e-178 629.4 565 60.2
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 4.4e-178 628.6 569 60.8
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 5.7e-178 628.2 560 60.7
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 1.7e-177 626.7 573 61.3
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 3.7e-177 625.5 563 60.4
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 4.8e-177 625.2 574 59.1
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 6.3e-177 624.8 553 62.7
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 4.1e-176 622.1 559 61.4
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 4.1e-176 622.1 558 62.0
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 4.1e-176 622.1 580 58.8
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 7.0e-176 621.3 563 60.2
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 9.1e-176 620.9 556 61.3
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 9.1e-176 620.9 565 59.6
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 4.5e-175 618.6 569 58.7
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 1.0e-174 617.5 558 60.8
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 2.9e-174 615.9 630 55.6
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 2.9e-174 615.9 595 58.3
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 8.5e-174 614.4 561 60.8
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.1e-173 614.0 552 61.4
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 2.5e-173 612.8 583 58.5
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 6.1e-172 608.2 572 59.3
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.3e-169 600.5 573 59.0
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.4e-168 597.0 567 59.3
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 3.6e-164 582.4 555 56.8
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 2.9e-158 562.8 569 55.2
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.1e-157 560.8 523 58.9
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.9e-157 560.1 568 56.9
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 4.4e-154 548.9 576 51.4
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 9.8e-154 547.7 559 55.8
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.3e-153 547.4 529 59.4
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 1.7e-153 547.0 556 56.1
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 5.4e-152 542.0 562 52.8
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 4.6e-151 538.9 633 50.2
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 2.6e-146 523.1 475 60.4
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.7e-142 510.4 507 56.6
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 3.4e-138 496.1 478 56.7
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 1.3e-129 467.6 399 64.2
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 5.3e-115 419.1 572 43.7
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 7.6e-114 415.2 551 42.8
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 5.1e-110 402.5 448 54.2
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 2.1e-100 370.5 575 44.0
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 9.3e-96 355.1 542 40.0
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 3.3e-93 346.7 224 74.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 9.7e-93 345.1 237 72.6
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.8e-92 343.6 397 52.9
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.9e-88 330.9 587 36.5
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 8.8e-70 268.9 291 55.0
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 4.4e-69 266.5 215 68.8
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 6.3e-68 262.7 238 56.7
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.2e-66 258.5 264 53.4
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 6.5e-65 252.7 307 52.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 1.7e-52 211.5 152 73.7
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 9.1e-51 205.7 376 41.8
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.7e-44 184.9 578 26.1
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.4e-43 181.0 193 52.8
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 3.9e-33 147.1 149 56.4
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 3.6e-31 140.6 157 55.4
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.7e-26 124.4 71 78.9
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 3.2e-11 74.3 54 72.2
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 1.8e-06 58.5 40 67.5


User provided reference genes

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