Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32340 Brassica carinata HOM05D010241 ORTHO05D012337 9.2e-188 660.2 368 100.0
BcaC07g42397 Brassica carinata HOM05D010241 ORTHO05D012337 3.5e-163 578.6 368 89.4
BcaB04g20292 Brassica carinata HOM05D010241 ORTHO05D012337 6.6e-154 547.7 368 85.3
BcaB04g19782 Brassica carinata HOM05D010241 ORTHO05D012337 7.3e-153 544.3 368 83.4
BolC2t12310H Brassica oleracea HOM05D010241 ORTHO05D012337 2.1e-131 473.0 370 77.6
A05p35610 Brassica napus HOM05D010241 ORTHO05D012337 2.0e-94 350.1 376 62.0
BcaC02g11453 Brassica carinata HOM05D010241 ORTHO05D012337 4.5e-78 295.8 376 52.7
BraA06t27648Z Brassica rapa HOM05D010241 ORTHO05D012337 8.6e-77 291.6 369 56.1
C03p39950 Brassica napus HOM05D010241 ORTHO05D012337 2.7e-70 270.0 264 59.8
BcaB03g11878 Brassica carinata HOM05D010241 ORTHO05D012337 3.3e-68 263.1 373 52.5
BcaB01g00183 Brassica carinata HOM05D010241 ORTHO05D012337 8.9e-58 228.4 324 52.2
BolC8t52838H Brassica oleracea HOM05D010241 ORTHO05D012337 1.1e-52 211.5 305 52.8
BcaNung01898 Brassica carinata HOM05D010241 ORTHO05D012337 7.3e-52 208.8 350 48.9
A01p01240 Brassica napus HOM05D010241 ORTHO05D012337 6.8e-50 202.2 204 61.3
BcaNung01311 Brassica carinata HOM05D010241 ORTHO05D012337 9.2e-47 191.8 102 96.1
BolC6t35840H Brassica oleracea HOM05D010241 ORTHO05D012337 1.9e-36 157.5 143 62.9
BolC3t15969H Brassica oleracea HOM05D010241 ORTHO05D012337 1.3e-32 144.8 114 73.7
BolC7t41457H Brassica oleracea HOM05D010241 ORTHO05D012337 1.7e-32 144.4 114 74.6
BolC3t19535H Brassica oleracea HOM05D010241 ORTHO05D012337 7.1e-23 112.5 84 77.4
BolC5t34250H Brassica oleracea HOM05D010241 ORTHO05D012337 2.5e-20 104.0 66 83.3
BraA04t16676Z Brassica rapa HOM05D010241 ORTHO05D012337 2.5e-20 104.0 63 87.3
BraA08t32688Z Brassica rapa HOM05D010241 ORTHO05D012337 2.5e-20 104.0 63 87.3
BolC2t08656H Brassica oleracea HOM05D010241 ORTHO05D012337 1.5e-12 78.2 106 54.7
Carub.0006s2626 Capsella rubella HOM05D031016 ORTHO05D026868 2.0e-09 67.8 171 37.4


User provided reference genes

Program Settings