Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32335 Brassica carinata HOM05D000466 ORTHO05D000331 6.7e-44 180.3 89 100.0
BcaC06g32331 Brassica carinata HOM05D000466 ORTHO05D000331 1.8e-28 129.0 96 70.8
BolC9t59820H Brassica oleracea HOM05D000466 ORTHO05D000331 1.8e-28 129.0 96 70.8
A10p30230 Brassica napus HOM05D000466 ORTHO05D000331 1.9e-22 109.0 97 64.9
C09p70640 Brassica napus HOM05D000466 ORTHO05D000331 1.9e-22 109.0 97 64.9
BraA10t45061Z Brassica rapa HOM05D000466 ORTHO05D000331 1.9e-22 109.0 97 64.9
BcaC06g32334 Brassica carinata HOM05D000466 ORTHO05D000331 4.2e-22 107.8 97 62.9
Thhalv10015675m.g Eutrema salsugineum HOM05D000466 ORTHO05D000331 1.8e-20 102.4 63 81.0
BcaB01g05733 Brassica carinata HOM05D000466 ORTHO05D000331 1.2e-19 99.8 62 82.3
BcaB01g05986 Brassica carinata HOM05D000466 ORTHO05D000331 2.2e-18 95.5 64 78.1
BolC3t12852H Brassica oleracea HOM05D000466 ORTHO05D000331 2.2e-18 95.5 64 78.1
Sp6g36630 Schrenkiella parvula HOM05D000466 ORTHO05D000331 4.8e-18 94.4 64 78.1
C03p03030 Brassica napus HOM05D000466 ORTHO05D000331 8.3e-18 93.6 64 76.6
A03p02640 Brassica napus HOM05D000466 ORTHO05D000331 4.5e-16 87.8 67 74.6
BraA03t09625Z Brassica rapa HOM05D000466 ORTHO05D000331 4.5e-16 87.8 67 74.6
BcaC06g32595 Brassica carinata HOM05D000466 ORTHO05D000331 2.1e-13 79.0 96 51.0
Carub.0006s0512 Capsella rubella HOM05D000466 ORTHO05D000331 7.8e-08 60.5 63 58.7
AT5G06250 Arabidopsis thaliana HOM05D000466 ORTHO05D000331 1.0e-07 60.1 64 57.8
CARHR086130 Cardamine hirsuta HOM05D000466 ORTHO05D000331 1.7e-07 59.3 62 61.3
THA.LOC104816694 Tarenaya hassleriana HOM05D000466 ORTHO05D000331 2.5e-06 55.5 86 45.3
AT2G36080 Arabidopsis thaliana HOM05D000466 ORTHO05D000331 5.6e-06 54.3 62 51.6
AL4G32170 Arabidopsis lyrata HOM05D000466 ORTHO05D000331 7.3e-06 53.9 62 51.6
Thhalv10017156m.g Eutrema salsugineum HOM05D000466 ORTHO05D000331 7.3e-06 53.9 62 51.6


User provided reference genes

Program Settings