Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32159 Brassica carinata HOM05D004158 ORTHO05D004884 8.0e-271 936.4 447 100.0
A10p31590 Brassica napus HOM05D004158 ORTHO05D004884 3.5e-242 841.3 447 87.9
BraA10t45205Z Brassica rapa HOM05D004158 ORTHO05D004884 3.5e-242 841.3 447 87.9
C09p72260 Brassica napus HOM05D004158 ORTHO05D004884 6.0e-242 840.5 447 87.5
BolC9t59970H Brassica oleracea HOM05D004158 ORTHO05D004884 5.1e-241 837.4 447 87.0
AL6G14142 Arabidopsis lyrata HOM05D004158 ORTHO05D004884 3.4e-221 771.5 442 81.4
AT5G04500 Arabidopsis thaliana HOM05D004158 ORTHO05D004884 9.3e-219 763.5 442 80.3
Carub.0006s0343 Capsella rubella HOM05D004158 ORTHO05D004884 3.3e-216 755.0 441 79.8
CARHR208770 Cardamine hirsuta HOM05D004158 ORTHO05D004884 2.6e-213 745.3 443 78.1
Aa31LG11G5370 Aethionema arabicum HOM05D004158 ORTHO05D004884 3.3e-208 728.4 443 77.2
Aa31LG9G6390 Aethionema arabicum HOM05D004158 ORTHO05D004884 1.3e-204 716.5 424 79.2
Sp1g23120 Schrenkiella parvula HOM05D004158 ORTHO05D004884 9.7e-200 700.3 445 76.9
C02p01960 Brassica napus HOM05D004158 ORTHO05D004884 2.8e-199 698.7 402 81.1
BcaB05g21757 Brassica carinata HOM05D004158 ORTHO05D004884 6.3e-199 697.6 403 81.9
BcaC03g12948 Brassica carinata HOM05D004158 ORTHO05D004884 8.2e-199 697.2 402 80.8
BraA02t04815Z Brassica rapa HOM05D004158 ORTHO05D004884 1.4e-198 696.4 402 80.8
BolC2t06153H Brassica oleracea HOM05D004158 ORTHO05D004884 4.1e-198 694.9 402 80.8
Thhalv10012710m.g Eutrema salsugineum HOM05D004158 ORTHO05D004884 2.0e-192 676.0 448 73.2
THA.LOC104816449 Tarenaya hassleriana HOM05D004158 ORTHO05D004884 2.7e-178 629.0 386 74.4
COL.COLO4_07610 Corchorus olitorius HOM05D004158 ORTHO05D004884 7.2e-171 604.4 399 68.4
Thecc.10G093600 Theobroma cacao HOM05D004158 ORTHO05D004884 1.3e-167 593.6 400 66.8
TAR623G1307 Trochodendron aralioides HOM05D004158 ORTHO05D004884 2.4e-166 589.3 400 66.2
TWI38G1342 Tripterygium wilfordii HOM05D004158 ORTHO05D004884 1.2e-165 587.0 414 65.2
Prupe.2G096900 Prunus persica HOM05D004158 ORTHO05D004884 2.0e-165 586.3 398 66.3
Nn6g35104 Nelumbo nucifera HOM05D004158 ORTHO05D004884 2.7e-165 585.9 409 65.5
Potri.008G028900 Populus trichocarpa HOM05D004158 ORTHO05D004884 4.5e-165 585.1 401 66.8
Actinidia18561 Actinidia chinensis HOM05D004158 ORTHO05D004884 5.0e-164 581.6 401 66.6
ClCG05G021490 Citrullus lanatus HOM05D004158 ORTHO05D004884 5.0e-164 581.6 399 67.2
Manes.06G020900 Manihot esculenta HOM05D004158 ORTHO05D004884 5.0e-164 581.6 399 66.7
FAN01G2366 Fragaria x ananassa HOM05D004158 ORTHO05D004884 8.6e-164 580.9 397 66.5
Gohir.A05G290400 Gossypium hirsutum HOM05D004158 ORTHO05D004884 1.5e-163 580.1 399 66.4
Cfa011201 Carpinus fangiana HOM05D004158 ORTHO05D004884 2.5e-163 579.3 409 65.5
Gorai.009G307300 Gossypium raimondii HOM05D004158 ORTHO05D004884 3.3e-163 578.9 399 65.7
MD02G1240900 Malus domestica HOM05D004158 ORTHO05D004884 4.3e-163 578.6 397 64.5
CsaV3_5G035760 Cucumis sativus L. HOM05D004158 ORTHO05D004884 5.6e-163 578.2 399 66.7
FAN06G0479 Fragaria x ananassa HOM05D004158 ORTHO05D004884 7.3e-163 577.8 397 66.5
Potri.010G232700 Populus trichocarpa HOM05D004158 ORTHO05D004884 9.5e-163 577.4 401 66.8
FvH4_7g07030 Fragaria vesca HOM05D004158 ORTHO05D004884 1.2e-162 577.0 397 66.2
FAN10G3528 Fragaria x ananassa HOM05D004158 ORTHO05D004884 1.2e-162 577.0 397 66.2
QL04p040389 Quercus lobata HOM05D004158 ORTHO05D004884 1.2e-162 577.0 401 66.8
Duzib114G0557 Durio zibethinus HOM05D004158 ORTHO05D004884 1.6e-162 576.6 399 66.7
RcHm_v2.0_Chr1g0336981 Rosa chinensis HOM05D004158 ORTHO05D004884 2.8e-162 575.9 402 65.2
MD07G1076200 Malus domestica HOM05D004158 ORTHO05D004884 4.7e-162 575.1 397 64.5
Sed0009937 Sechium edule HOM05D004158 ORTHO05D004884 1.4e-161 573.5 399 66.4
Eucgr.G02723 Eucalyptus grandis HOM05D004158 ORTHO05D004884 2.3e-161 572.8 418 62.9
Rhsim03G0110500 Rhododendron simsii HOM05D004158 ORTHO05D004884 3.1e-161 572.4 410 64.6
vmacro07210 Vaccinium macrocarpon HOM05D004158 ORTHO05D004884 1.5e-160 570.1 405 64.9
CiPaw.13G034700 Carya illinoinensis HOM05D004158 ORTHO05D004884 2.0e-160 569.7 401 65.3
Ciclev10030719m.g Citrus clementina HOM05D004158 ORTHO05D004884 4.4e-160 568.5 397 65.2
PSO063G5270 Papaver somniferum HOM05D004158 ORTHO05D004884 9.8e-160 567.4 400 63.5
Nn2g13950 Nelumbo nucifera HOM05D004158 ORTHO05D004884 1.3e-159 567.0 400 63.8
PSO339G4003 Papaver somniferum HOM05D004158 ORTHO05D004884 1.7e-159 566.6 400 63.2
Sabra10G0180500 Salix brachista HOM05D004158 ORTHO05D004884 1.7e-159 566.6 401 66.6
Hund06745 Selenicereus undatus HOM05D004158 ORTHO05D004884 1.7e-159 566.6 399 62.7
Duzib128G0995 Durio zibethinus HOM05D004158 ORTHO05D004884 3.7e-159 565.5 362 70.2
Gohir.D05G291601 Gossypium hirsutum HOM05D004158 ORTHO05D004884 6.4e-159 564.7 385 66.5
Glyma.10G200700 Glycine max HOM05D004158 ORTHO05D004884 1.4e-158 563.5 395 64.6
Sabra08G0019400 Salix brachista HOM05D004158 ORTHO05D004884 1.4e-158 563.5 442 61.5
VMungo0720G2210 Vigna mungo HOM05D004158 ORTHO05D004884 1.9e-158 563.1 395 65.3
Atru.chr12.930 Acer truncatum HOM05D004158 ORTHO05D004884 2.4e-158 562.8 410 62.7
MELO3C012377.2 Cucumis melo HOM05D004158 ORTHO05D004884 2.4e-158 562.8 429 62.0
Glyma.20G189900 Glycine max HOM05D004158 ORTHO05D004884 4.1e-158 562.0 395 64.1
Lalb_Chr02g0151231 Lupinus albus HOM05D004158 ORTHO05D004884 4.1e-158 562.0 420 61.7
Dinv20856 Davidia involucrata HOM05D004158 ORTHO05D004884 5.4e-158 561.6 399 65.7
Phvul.007G144400 Phaseolus vulgaris HOM05D004158 ORTHO05D004884 5.4e-158 561.6 395 64.8
Haze_02645 Corylus avellana HOM05D004158 ORTHO05D004884 9.2e-158 560.8 428 61.7
Lalb_Chr06g0170091 Lupinus albus HOM05D004158 ORTHO05D004884 9.2e-158 560.8 410 62.2
Medtr1g090920 Medicago truncatula HOM05D004158 ORTHO05D004884 1.2e-157 560.5 405 62.2
Hund06746 Selenicereus undatus HOM05D004158 ORTHO05D004884 1.2e-157 560.5 399 62.7
PGSC0003DMG400027356 Solanum tuberosum HOM05D004158 ORTHO05D004884 2.7e-157 559.3 401 65.6
Lj5g0005466 Lotus japonicus HOM05D004158 ORTHO05D004884 3.5e-157 558.9 399 62.9
PGR142G1291 Punica granatum HOM05D004158 ORTHO05D004884 6.0e-157 558.1 395 63.3
arahy.Tifrunner.gnm1.ann1.SHL6Z6 Arachis hypogaea HOM05D004158 ORTHO05D004884 7.8e-157 557.8 415 61.2
Ca_10468_v3 Cicer arietinum L. HOM05D004158 ORTHO05D004884 7.8e-157 557.8 405 61.7
MD02G1240800 Malus domestica HOM05D004158 ORTHO05D004884 7.8e-157 557.8 414 61.4
AUR62031975 Chenopodium quinoa HOM05D004158 ORTHO05D004884 1.0e-156 557.4 400 63.8
Cc02_g10420 Coffea canephora HOM05D004158 ORTHO05D004884 1.0e-156 557.4 399 64.2
Nitab4.5_0003408g0110 Nicotiana tabacum HOM05D004158 ORTHO05D004884 1.0e-156 557.4 401 64.6
CiPaw.14G027300 Carya illinoinensis HOM05D004158 ORTHO05D004884 1.7e-156 556.6 401 64.8
CAN.G135.48 Capsicum annuum HOM05D004158 ORTHO05D004884 3.0e-156 555.8 397 65.5
GSVIVG01034672001 Vitis vinifera HOM05D004158 ORTHO05D004884 3.0e-156 555.8 397 63.5
MSTRG.406 Avicennia marina HOM05D004158 ORTHO05D004884 3.9e-156 555.4 399 62.2
Solyc11g007770.2 Solanum lycopersicum HOM05D004158 ORTHO05D004884 3.9e-156 555.4 401 64.6
Lalb_Chr21g0313121 Lupinus albus HOM05D004158 ORTHO05D004884 6.6e-156 554.7 410 62.0
arahy.Tifrunner.gnm1.ann1.16QXFL Arachis hypogaea HOM05D004158 ORTHO05D004884 8.6e-156 554.3 400 61.8
Sopen11g003630 Solanum pennellii HOM05D004158 ORTHO05D004884 8.6e-156 554.3 401 64.6
AUR62022268 Chenopodium quinoa HOM05D004158 ORTHO05D004884 1.5e-155 553.5 400 63.5
Hma1.2p1_0492F.1_g164760 Hydrangea macrophylla HOM05D004158 ORTHO05D004884 4.3e-155 552.0 414 61.8
Peaxi162Scf00398g00720 Petunia axillaris HOM05D004158 ORTHO05D004884 7.3e-155 551.2 401 63.8
Psat6g176040 Pisum sativum HOM05D004158 ORTHO05D004884 3.6e-154 548.9 393 62.3
CSS0041510 Camellia sinensis var. sinensis HOM05D004158 ORTHO05D004884 1.2e-152 543.9 398 63.3
PSO063G3822 Papaver somniferum HOM05D004158 ORTHO05D004884 1.2e-152 543.9 400 60.0
SalBow6G6612 Salvia bowleyana HOM05D004158 ORTHO05D004884 1.7e-151 540.0 397 62.0
Nitab4.5_0000096g0160 Nicotiana tabacum HOM05D004158 ORTHO05D004884 5.4e-150 535.0 401 62.3
Aqoxy1G01001 Aquilegia oxysepala HOM05D004158 ORTHO05D004884 2.7e-149 532.7 400 61.2
MSTRG.9120 Avicennia marina HOM05D004158 ORTHO05D004884 2.7e-149 532.7 423 59.3
Oeu059840.1 Olea europaea HOM05D004158 ORTHO05D004884 3.5e-149 532.3 427 58.8
Ah.04g163550 Amaranthus hybridus HOM05D004158 ORTHO05D004884 1.3e-148 530.4 401 62.3
Nitab4.5_0007922g0020 Nicotiana tabacum HOM05D004158 ORTHO05D004884 1.7e-148 530.0 401 61.8
Peaxi162Scf00004g00010 Petunia axillaris HOM05D004158 ORTHO05D004884 3.0e-148 529.3 412 60.9
SalBow4G0446 Salvia bowleyana HOM05D004158 ORTHO05D004884 3.0e-148 529.3 399 59.6
Lsat_1_v5_gn_9_70320 Lactuca sativa HOM05D004158 ORTHO05D004884 2.5e-147 526.2 365 64.9
Nitab4.5_0000593g0240 Nicotiana tabacum HOM05D004158 ORTHO05D004884 2.5e-147 526.2 401 63.1
PGSC0003DMG400023377 Solanum tuberosum HOM05D004158 ORTHO05D004884 5.6e-147 525.0 401 60.8
Migut.F01667 Erythranthe guttata HOM05D004158 ORTHO05D004884 3.6e-146 522.3 363 62.8
TPR.G21919 Trifolium pratense HOM05D004158 ORTHO05D004884 1.8e-145 520.0 406 59.6
DCAR_019047 Daucus carota HOM05D004158 ORTHO05D004884 2.3e-145 519.6 406 60.8
HanXRQChr09g0247121 Helianthus annuus HOM05D004158 ORTHO05D004884 4.0e-145 518.8 407 58.0
Solyc05g055420.4 Solanum lycopersicum HOM05D004158 ORTHO05D004884 4.0e-145 518.8 401 60.8
unitig_748.g8777 Utricularia gibba HOM05D004158 ORTHO05D004884 1.5e-144 516.9 362 61.6
CDE05G0220 Ceratophyllum demersum HOM05D004158 ORTHO05D004884 7.5e-144 514.6 388 60.1
Sopen05g033860 Solanum pennellii HOM05D004158 ORTHO05D004884 7.5e-144 514.6 401 60.3
CDE05G1361 Ceratophyllum demersum HOM05D004158 ORTHO05D004884 2.9e-143 512.7 388 60.6
CAN.G1891.11 Capsicum annuum HOM05D004158 ORTHO05D004884 4.9e-143 511.9 401 59.9
ECA232G3252 Erigeron canadensis HOM05D004158 ORTHO05D004884 6.4e-143 511.5 364 62.6
Lj3A934G31 Lonicera japonica HOM05D004158 ORTHO05D004884 3.2e-142 509.2 396 61.4
HanXRQChr13g0404601 Helianthus annuus HOM05D004158 ORTHO05D004884 7.1e-142 508.1 410 57.1
Cpa.g.sc128.66 Carica papaya HOM05D004158 ORTHO05D004884 9.2e-142 507.7 315 71.7
Sc25g0001340 Simmondsia chinensis HOM05D004158 ORTHO05D004884 1.2e-141 507.3 383 61.9
Migut.F00926 Erythranthe guttata HOM05D004158 ORTHO05D004884 6.6e-140 501.5 391 59.3
PSO339G6367 Papaver somniferum HOM05D004158 ORTHO05D004884 1.9e-139 500.0 397 58.4
ATR0749G020 Amborella trichopoda HOM05D004158 ORTHO05D004884 5.6e-139 498.4 377 59.2
ATR0665G113 Amborella trichopoda HOM05D004158 ORTHO05D004884 1.6e-138 496.9 389 57.6
PSO384G3917 Papaver somniferum HOM05D004158 ORTHO05D004884 2.4e-137 493.0 396 58.1
EL10Ac4g08627 Beta vulgaris HOM05D004158 ORTHO05D004884 1.2e-136 490.7 399 58.1
MBI04_g34128_MAGBIO Magnolia biondii HOM05D004158 ORTHO05D004884 5.8e-136 488.4 398 56.0
SHI21307 Sapria himalayana HOM05D004158 ORTHO05D004884 1.3e-135 487.3 393 57.8
Aqoxy2G01507 Aquilegia oxysepala HOM05D004158 ORTHO05D004884 6.4e-135 485.0 398 55.8
SGA_v2.0_scaffold13G06506 Striga asiatica HOM05D004158 ORTHO05D004884 1.9e-134 483.4 377 57.6
Pp3c6_28590 Physcomitrium patens HOM05D004158 ORTHO05D004884 4.6e-133 478.8 395 55.7
Manes.10G053900 Manihot esculenta HOM05D004158 ORTHO05D004884 7.8e-133 478.0 399 58.1
MBI01_g11032_MAGBIO Magnolia biondii HOM05D004158 ORTHO05D004884 1.6e-130 470.3 335 63.6
Os05g0540000 Oryza sativa ssp. japonica HOM05D004158 ORTHO05D004884 8.4e-127 458.0 385 54.3
Pp3c16_2210 Physcomitrium patens HOM05D004158 ORTHO05D004884 1.1e-126 457.6 399 53.4
AagrBONN_evm.TU.Sc2ySwM_368.1503 Anthoceros agrestis HOM05D004158 ORTHO05D004884 1.4e-126 457.2 401 53.4
SMO367G0291 Selaginella moellendorffii HOM05D004158 ORTHO05D004884 1.9e-126 456.8 381 53.5
Pp3c5_3040 Physcomitrium patens HOM05D004158 ORTHO05D004884 5.4e-126 455.3 395 51.6
Zm00001eb342340 Zea mays HOM05D004158 ORTHO05D004884 4.6e-125 452.2 353 56.1
Zm00001eb294280 Zea mays HOM05D004158 ORTHO05D004884 1.0e-124 451.1 351 55.6
HPP92_019597 Vanilla planifolia HOM05D004158 ORTHO05D004884 1.7e-124 450.3 385 54.8
Os03g0684500 Oryza sativa ssp. japonica HOM05D004158 ORTHO05D004884 4.3e-123 445.7 406 52.2
Mapoly0001s0350 Marchantia polymorpha HOM05D004158 ORTHO05D004884 1.1e-121 441.0 386 52.1
unitig_746.g26628 Utricularia gibba HOM05D004158 ORTHO05D004884 2.4e-118 429.9 321 62.0
Lsat_1_v5_gn_8_22880 Lactuca sativa HOM05D004158 ORTHO05D004884 3.5e-117 426.0 365 54.2
HanXRQChr08g0218041 Helianthus annuus HOM05D004158 ORTHO05D004884 3.3e-115 419.5 346 56.1
Oeu047512.1 Olea europaea HOM05D004158 ORTHO05D004884 1.8e-113 413.7 294 64.3
MSTRG.27512 Avicennia marina HOM05D004158 ORTHO05D004884 3.4e-112 409.5 294 62.6
ECA233G5256 Erigeron canadensis HOM05D004158 ORTHO05D004884 3.2e-102 376.3 333 53.5
Oeu032438.1 Olea europaea HOM05D004158 ORTHO05D004884 6.1e-101 372.1 274 60.6
Dinv31277 Davidia involucrata HOM05D004158 ORTHO05D004884 7.2e-86 322.0 232 62.1
Sc09g0005780 Simmondsia chinensis HOM05D004158 ORTHO05D004884 7.9e-85 318.5 234 61.5
Sc09g0005790 Simmondsia chinensis HOM05D004158 ORTHO05D004884 2.2e-63 247.3 174 63.8
SGA_v2.0_scaffold62G21518 Striga asiatica HOM05D004158 ORTHO05D004884 3.3e-54 216.9 161 61.5
Zm00001eb053370 Zea mays HOM05D004158 ORTHO05D004884 2.1e-45 187.6 163 52.1
Cre09.g388450 Chlamydomonas reinhardtii HOM05D004158 ORTHO05D004884 1.6e-32 144.8 375 29.1
RcHm_v2.0_Chr1g0359101 Rosa chinensis HOM05D004158 ORTHO05D004884 7.3e-30 136.0 110 60.9
CAN.G765.11 Capsicum annuum HOM05D004158 ORTHO05D004884 2.1e-29 134.4 87 66.7
MBI01_g11031_MAGBIO Magnolia biondii HOM05D004158 ORTHO05D004884 4.3e-14 83.6 68 54.4
Cpa.g.sc128.65 Carica papaya HOM05D004158 ORTHO05D004884 1.3e-10 72.0 59 59.3
FAN13G2508 Fragaria x ananassa HOM05D004158 ORTHO05D004884 1.9e-06 58.2 29 75.9


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