Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32154 Brassica carinata HOM05D001163 ORTHO05D001769 2.6e-33 144.8 73 100.0
BcaC06g32155 Brassica carinata HOM05D001163 ORTHO05D001769 8.0e-27 123.2 63 100.0
AL6G14090 Arabidopsis lyrata HOM05D001163 ORTHO05D001769 1.5e-17 92.4 68 77.9
Aqoxy1G01048 Aquilegia oxysepala HOM05D001163 ORTHO05D001769 5.7e-17 90.5 68 73.5
Carub.0006s0339 Capsella rubella HOM05D001163 ORTHO05D001769 7.5e-17 90.1 68 76.5
CARHR208810 Cardamine hirsuta HOM05D001163 ORTHO05D001769 7.5e-17 90.1 68 75.0
MD07G1074600 Malus domestica HOM05D001163 ORTHO05D001769 1.3e-16 89.4 68 73.5
AT5G04460 Arabidopsis thaliana HOM05D001163 ORTHO05D001769 1.7e-16 89.0 70 75.7
MD02G1237400 Malus domestica HOM05D001163 ORTHO05D001769 2.8e-16 88.2 68 72.1
Nn2g13882 Nelumbo nucifera HOM05D001163 ORTHO05D001769 3.7e-16 87.8 64 75.0
THA.LOC104816446 Tarenaya hassleriana HOM05D001163 ORTHO05D001769 4.9e-16 87.4 68 75.0
Ciclev10030689m.g Citrus clementina HOM05D001163 ORTHO05D001769 6.3e-16 87.0 70 71.4
COL.COLO4_32880 Corchorus olitorius HOM05D001163 ORTHO05D001769 6.3e-16 87.0 70 68.6
vmacro07199 Vaccinium macrocarpon HOM05D001163 ORTHO05D001769 6.3e-16 87.0 70 68.6
TAR633G2218 Trochodendron aralioides HOM05D001163 ORTHO05D001769 8.3e-16 86.7 64 75.0
Manes.07G093800 Manihot esculenta HOM05D001163 ORTHO05D001769 1.4e-15 85.9 68 70.6
Duzib114G0656 Durio zibethinus HOM05D001163 ORTHO05D001769 1.8e-15 85.5 68 72.1
Nn6g35186 Nelumbo nucifera HOM05D001163 ORTHO05D001769 1.8e-15 85.5 68 70.6
Lj3A935G38 Lonicera japonica HOM05D001163 ORTHO05D001769 2.4e-15 85.1 67 71.6
Cfa001773 Carpinus fangiana HOM05D001163 ORTHO05D001769 3.2e-15 84.7 68 69.1
Haze_16778 Corylus avellana HOM05D001163 ORTHO05D001769 3.2e-15 84.7 68 69.1
Cc02_g10550 Coffea canephora HOM05D001163 ORTHO05D001769 5.4e-15 84.0 70 70.0
FAN03G3273 Fragaria x ananassa HOM05D001163 ORTHO05D001769 5.4e-15 84.0 70 68.6
RcHm_v2.0_Chr1g0336281 Rosa chinensis HOM05D001163 ORTHO05D001769 5.4e-15 84.0 68 69.1
Duzib106G1239 Durio zibethinus HOM05D001163 ORTHO05D001769 7.0e-15 83.6 68 69.1
FvH4_7g06660 Fragaria vesca HOM05D001163 ORTHO05D001769 9.2e-15 83.2 68 69.1
FAN06G1746 Fragaria x ananassa HOM05D001163 ORTHO05D001769 9.2e-15 83.2 68 69.1
FAN10G3476 Fragaria x ananassa HOM05D001163 ORTHO05D001769 9.2e-15 83.2 68 69.1
PGR044G1566 Punica granatum HOM05D001163 ORTHO05D001769 9.2e-15 83.2 70 67.1
TAR369G0606 Trochodendron aralioides HOM05D001163 ORTHO05D001769 9.2e-15 83.2 68 67.6
TAR453G0001 Trochodendron aralioides HOM05D001163 ORTHO05D001769 9.2e-15 83.2 68 67.6
Ah.04g163560 Amaranthus hybridus HOM05D001163 ORTHO05D001769 1.2e-14 82.8 70 67.1
CANSAT56G0151 Cannabis sativa HOM05D001163 ORTHO05D001769 1.6e-14 82.4 65 73.8
Lsat_1_v5_gn_8_17741 Lactuca sativa HOM05D001163 ORTHO05D001769 1.6e-14 82.4 69 69.6
Lj2A24T66 Lonicera japonica HOM05D001163 ORTHO05D001769 1.6e-14 82.4 68 69.1
Sp3g08780 Schrenkiella parvula HOM05D001163 ORTHO05D001769 1.6e-14 82.4 62 79.0
CiPaw.02G169900 Carya illinoinensis HOM05D001163 ORTHO05D001769 2.0e-14 82.0 64 73.4
AUR62041258 Chenopodium quinoa HOM05D001163 ORTHO05D001769 2.7e-14 81.6 70 67.1
AUR62043092 Chenopodium quinoa HOM05D001163 ORTHO05D001769 2.7e-14 81.6 70 67.1
Solyc11g007910.2 Solanum lycopersicum HOM05D001163 ORTHO05D001769 2.7e-14 81.6 70 68.6
Sopen11g003770 Solanum pennellii HOM05D001163 ORTHO05D001769 2.7e-14 81.6 70 68.6
Dinv36358 Davidia involucrata HOM05D001163 ORTHO05D001769 3.5e-14 81.3 70 67.1
QL08p053050 Quercus lobata HOM05D001163 ORTHO05D001769 3.5e-14 81.3 69 71.0
PGSC0003DMG400027362 Solanum tuberosum HOM05D001163 ORTHO05D001769 3.5e-14 81.3 70 68.6
Thhalv10020131m.g Eutrema salsugineum HOM05D001163 ORTHO05D001769 4.6e-14 80.9 54 85.2
FAN01G1559 Fragaria x ananassa HOM05D001163 ORTHO05D001769 4.6e-14 80.9 68 67.6
Potri.008G030100 Populus trichocarpa HOM05D001163 ORTHO05D001769 4.6e-14 80.9 63 71.4
Sabra08G0020200 Salix brachista HOM05D001163 ORTHO05D001769 4.6e-14 80.9 63 71.4
Hund06765 Selenicereus undatus HOM05D001163 ORTHO05D001769 4.6e-14 80.9 70 65.7
CiPaw.01G265000 Carya illinoinensis HOM05D001163 ORTHO05D001769 5.9e-14 80.5 64 71.9
Rhsim03G0111600 Rhododendron simsii HOM05D001163 ORTHO05D001769 5.9e-14 80.5 68 69.1
Hma1.2p1_0454F.1_g156250 Hydrangea macrophylla HOM05D001163 ORTHO05D001769 7.8e-14 80.1 64 68.8
PSO063G4402 Papaver somniferum HOM05D001163 ORTHO05D001769 7.8e-14 80.1 68 67.6
PSO339G4037 Papaver somniferum HOM05D001163 ORTHO05D001769 7.8e-14 80.1 68 67.6
Aa31LG11G5320 Aethionema arabicum HOM05D001163 ORTHO05D001769 1.0e-13 79.7 68 72.1
Sp6g38290 Schrenkiella parvula HOM05D001163 ORTHO05D001769 1.0e-13 79.7 68 70.6
TWI38G1849 Tripterygium wilfordii HOM05D001163 ORTHO05D001769 1.0e-13 79.7 68 67.6
TAR623G0804 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.3e-13 79.3 63 71.4
Actinidia18556 Actinidia chinensis HOM05D001163 ORTHO05D001769 1.7e-13 79.0 69 68.1
Nitab4.5_0000255g0020 Nicotiana tabacum HOM05D001163 ORTHO05D001769 1.7e-13 79.0 70 68.6
Nitab4.5_0000593g0360 Nicotiana tabacum HOM05D001163 ORTHO05D001769 1.7e-13 79.0 70 68.6
Atru.chr12.912 Acer truncatum HOM05D001163 ORTHO05D001769 2.3e-13 78.6 70 68.6
Gorai.002G143900 Gossypium raimondii HOM05D001163 ORTHO05D001769 2.3e-13 78.6 63 69.8
Lsat_1_v5_gn_2_103280 Lactuca sativa HOM05D001163 ORTHO05D001769 2.3e-13 78.6 70 68.6
SalBow6G2739 Salvia bowleyana HOM05D001163 ORTHO05D001769 2.3e-13 78.6 68 67.6
Gorai.009G308200 Gossypium raimondii HOM05D001163 ORTHO05D001769 2.9e-13 78.2 67 65.7
MBI18_g15814_MAGBIO Magnolia biondii HOM05D001163 ORTHO05D001769 3.9e-13 77.8 70 65.7
Potri.010G231100 Populus trichocarpa HOM05D001163 ORTHO05D001769 3.9e-13 77.8 62 71.0
Prupe.2G094700 Prunus persica HOM05D001163 ORTHO05D001769 3.9e-13 77.8 68 69.1
Gohir.A01G129400 Gossypium hirsutum HOM05D001163 ORTHO05D001769 8.6e-13 76.6 67 65.7
Gohir.D01G118200 Gossypium hirsutum HOM05D001163 ORTHO05D001769 8.6e-13 76.6 67 65.7
Actinidia38893 Actinidia chinensis HOM05D001163 ORTHO05D001769 1.1e-12 76.3 68 64.7
Glyma.10G198600 Glycine max HOM05D001163 ORTHO05D001769 1.1e-12 76.3 70 67.1
Sabra10G0179200 Salix brachista HOM05D001163 ORTHO05D001769 1.1e-12 76.3 62 69.4
Actinidia06719 Actinidia chinensis HOM05D001163 ORTHO05D001769 1.5e-12 75.9 69 65.2
Eucgr.G02736 Eucalyptus grandis HOM05D001163 ORTHO05D001769 2.5e-12 75.1 68 63.2
arahy.Tifrunner.gnm1.ann1.HZDG1A Arachis hypogaea HOM05D001163 ORTHO05D001769 3.3e-12 74.7 68 64.7
arahy.Tifrunner.gnm1.ann1.PY5VJM Arachis hypogaea HOM05D001163 ORTHO05D001769 3.3e-12 74.7 68 64.7
arahy.Tifrunner.gnm1.ann1.SHM2EA Arachis hypogaea HOM05D001163 ORTHO05D001769 3.3e-12 74.7 68 64.7
Gohir.D05G292201 Gossypium hirsutum HOM05D001163 ORTHO05D001769 3.3e-12 74.7 67 64.2
Sed0016921 Sechium edule HOM05D001163 ORTHO05D001769 3.3e-12 74.7 68 63.2
TWI63G0053 Tripterygium wilfordii HOM05D001163 ORTHO05D001769 3.3e-12 74.7 54 79.6
MSTRG.27505 Avicennia marina HOM05D001163 ORTHO05D001769 4.3e-12 74.3 67 64.2
ClCG05G021440 Citrullus lanatus HOM05D001163 ORTHO05D001769 4.3e-12 74.3 68 63.2
MELO3C012383.2 Cucumis melo HOM05D001163 ORTHO05D001769 4.3e-12 74.3 68 63.2
CsaV3_5G035810 Cucumis sativus L. HOM05D001163 ORTHO05D001769 4.3e-12 74.3 68 63.2
Gohir.A05G291020 Gossypium hirsutum HOM05D001163 ORTHO05D001769 4.3e-12 74.3 67 62.7
Peaxi162Scf00543g00214 Petunia axillaris HOM05D001163 ORTHO05D001769 4.3e-12 74.3 70 65.7
Thecc.10G089900 Theobroma cacao HOM05D001163 ORTHO05D001769 5.6e-12 73.9 53 79.2
Sc20g0001490 Simmondsia chinensis HOM05D001163 ORTHO05D001769 7.3e-12 73.6 70 62.9
Actinidia34787 Actinidia chinensis HOM05D001163 ORTHO05D001769 9.5e-12 73.2 68 63.2
Oeu005285.1 Olea europaea HOM05D001163 ORTHO05D001769 9.5e-12 73.2 68 66.2
Peaxi162Scf00253g00219 Petunia axillaris HOM05D001163 ORTHO05D001769 9.5e-12 73.2 68 64.7
Psat6g173560 Pisum sativum HOM05D001163 ORTHO05D001769 9.5e-12 73.2 70 65.7
Lalb_Chr02g0151121 Lupinus albus HOM05D001163 ORTHO05D001769 1.2e-11 72.8 68 63.2
Dinv31266 Davidia involucrata HOM05D001163 ORTHO05D001769 1.6e-11 72.4 53 79.2
Gohir.A10G200200 Gossypium hirsutum HOM05D001163 ORTHO05D001769 1.6e-11 72.4 54 77.8
Gohir.D10G208100 Gossypium hirsutum HOM05D001163 ORTHO05D001769 1.6e-11 72.4 54 77.8
Gorai.011G233800 Gossypium raimondii HOM05D001163 ORTHO05D001769 1.6e-11 72.4 54 77.8
Lj5g0003206 Lotus japonicus HOM05D001163 ORTHO05D001769 2.1e-11 72.0 70 65.7
PGSC0003DMG400016919 Solanum tuberosum HOM05D001163 ORTHO05D001769 2.1e-11 72.0 67 61.2
Medtr1g090803 Medicago truncatula HOM05D001163 ORTHO05D001769 2.8e-11 71.6 70 64.3
DCAR_006388 Daucus carota HOM05D001163 ORTHO05D001769 4.7e-11 70.9 72 59.7
Lalb_Chr06g0170041 Lupinus albus HOM05D001163 ORTHO05D001769 4.7e-11 70.9 70 64.3
Lalb_Chr21g0313071 Lupinus albus HOM05D001163 ORTHO05D001769 4.7e-11 70.9 70 64.3
Sed0018777 Sechium edule HOM05D001163 ORTHO05D001769 4.7e-11 70.9 67 62.7
CSS0033081 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D001769 1.0e-10 69.7 55 72.7
CDE03G0138 Ceratophyllum demersum HOM05D001163 ORTHO05D001769 1.0e-10 69.7 66 63.6
Sopen03g019920 Solanum pennellii HOM05D001163 ORTHO05D001769 1.0e-10 69.7 67 59.7
CARHR085020 Cardamine hirsuta HOM05D001163 ORTHO05D001769 2.3e-10 68.6 62 66.1
Migut.F01674 Erythranthe guttata HOM05D001163 ORTHO05D001769 3.1e-10 68.2 69 63.8
MSTRG.401 Avicennia marina HOM05D001163 ORTHO05D001769 6.8e-10 67.0 68 63.2
Oeu059824.1 Olea europaea HOM05D000620 ORTHO05D000537 6.8e-10 67.0 58 69.0
unitig_0.g2618 Utricularia gibba HOM05D001163 ORTHO05D001769 6.8e-10 67.0 67 59.7
vmacro10264 Vaccinium macrocarpon HOM05D001163 ORTHO05D001769 8.9e-10 66.6 68 60.3
Glyma.20G191400 Glycine max HOM05D001163 ORTHO05D001769 2.0e-09 65.5 54 70.4
Phvul.007G145500 Phaseolus vulgaris HOM05D001163 ORTHO05D001769 2.0e-09 65.5 54 70.4
SGA_v2.0_scaffold176G39390 Striga asiatica HOM05D001163 ORTHO05D001769 2.0e-09 65.5 64 65.6
TPR.G37745 Trifolium pratense HOM05D001163 ORTHO05D001769 2.0e-09 65.5 54 70.4
VMungo0720G0656 Vigna mungo HOM05D001163 ORTHO05D001769 2.0e-09 65.5 54 70.4
ECA233G4552 Erigeron canadensis HOM05D001163 ORTHO05D001769 3.4e-09 64.7 71 63.4
HanXRQChr14g0456141 Helianthus annuus HOM05D001163 ORTHO05D001769 3.4e-09 64.7 55 74.5
Rhsim09G0145200 Rhododendron simsii HOM05D001163 ORTHO05D001769 3.4e-09 64.7 69 59.4
EL10Ac4g08632 Beta vulgaris HOM05D001163 ORTHO05D001769 4.4e-09 64.3 53 71.7
BolC1t05390H Brassica oleracea HOM05D001163 ORTHO05D001769 5.8e-09 63.9 55 72.7
Ca_10456_v3 Cicer arietinum L. HOM05D001163 ORTHO05D001769 7.5e-09 63.5 54 68.5
HanXRQChr08g0218291 Helianthus annuus HOM05D001163 ORTHO05D001769 1.7e-08 62.4 54 72.2
SalBow4G1952 Salvia bowleyana HOM05D001163 ORTHO05D001769 2.2e-08 62.0 51 68.6
SGA_v2.0_scaffold41G15750 Striga asiatica HOM05D001163 ORTHO05D001769 2.2e-08 62.0 61 63.9
ECA238G2182 Erigeron canadensis HOM05D001163 ORTHO05D001769 2.9e-08 61.6 57 68.4
BcaNung04929 Brassica carinata HOM05D001163 ORTHO05D001769 3.7e-08 61.2 55 69.1
ATR0043G042 Amborella trichopoda HOM05D001163 ORTHO05D001769 8.3e-08 60.1 62 59.7
CSS0029005 Camellia sinensis var. sinensis HOM05D001163 ORTHO05D001769 1.1e-07 59.7 59 64.4
COL.COLO4_19220 Corchorus olitorius HOM05D001163 ORTHO05D001769 1.1e-07 59.7 65 53.8
BraA01t04247Z Brassica rapa HOM05D001163 ORTHO05D001769 2.4e-07 58.5 54 66.7
Ciclev10027818m.g Citrus clementina HOM05D001163 ORTHO05D001769 2.4e-07 58.5 62 59.7
BraA05t22658Z Brassica rapa HOM05D001163 ORTHO05D001769 3.2e-07 58.2 66 62.1
PSO339G1246 Papaver somniferum HOM05D001163 ORTHO05D001769 3.2e-07 58.2 62 59.7
PSO801G0238 Papaver somniferum HOM05D001163 ORTHO05D001769 3.2e-07 58.2 62 59.7
unitig_26.g9466 Utricularia gibba HOM05D001163 ORTHO05D001769 3.2e-07 58.2 51 70.6
Atru.chr3.3497 Acer truncatum HOM05D001163 ORTHO05D001769 7.0e-07 57.0 63 58.7
Thecc.09G296700 Theobroma cacao HOM05D001163 ORTHO05D001769 7.0e-07 57.0 65 55.4
Gohir.D05G087500 Gossypium hirsutum HOM05D001163 ORTHO05D001769 1.2e-06 56.2 65 53.8
Gorai.009G089300 Gossypium raimondii HOM05D001163 ORTHO05D001769 1.2e-06 56.2 65 53.8
GSVIVG01016162001 Vitis vinifera HOM05D001163 ORTHO05D001769 1.2e-06 56.2 52 65.4
EL10Ac4g08629 Beta vulgaris HOM05D001163 ORTHO05D001769 1.6e-06 55.8 46 67.4
Gohir.A05G084700 Gossypium hirsutum HOM05D001163 ORTHO05D001769 1.6e-06 55.8 65 53.8
Cc01_g10160 Coffea canephora HOM05D001163 ORTHO05D001769 2.0e-06 55.5 68 51.5
vmacro03248 Vaccinium macrocarpon HOM05D001163 ORTHO05D001769 3.5e-06 54.7 63 52.4
A05p38670 Brassica napus HOM05D001163 ORTHO05D001769 4.6e-06 54.3 63 61.9
Gohir.A07G105500 Gossypium hirsutum HOM05D001163 ORTHO05D001769 4.6e-06 54.3 65 50.8
Rhsim13G0101900 Rhododendron simsii HOM05D001163 ORTHO05D001769 6.0e-06 53.9 63 52.4


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