Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g32147 Brassica carinata HOM05D000149 ORTHO05D095832 2.7e-32 141.4 70 100.0
C09p72380 Brassica napus HOM05D000149 ORTHO05D000076 5.5e-17 90.5 45 100.0
BolC9t59980H Brassica oleracea HOM05D000149 ORTHO05D000076 5.5e-17 90.5 45 100.0
C09p72360 Brassica napus HOM05D000149 ORTHO05D000076 1.2e-16 89.4 46 91.3
A10p31690 Brassica napus HOM05D000149 ORTHO05D000076 6.7e-15 83.6 45 93.3
BraA10t45216Z Brassica rapa HOM05D000149 ORTHO05D000076 6.7e-15 83.6 45 93.3
Sp6g38350 Schrenkiella parvula HOM05D000149 ORTHO05D000076 4.1e-12 74.3 56 67.9
BcaNung05794 Brassica carinata HOM05D000149 ORTHO05D000076 9.1e-12 73.2 52 65.4
BcaB01g05894 Brassica carinata HOM05D000149 ORTHO05D000076 1.6e-11 72.4 52 67.3
BolC3t12754H Brassica oleracea HOM05D000149 ORTHO05D000076 1.6e-11 72.4 52 67.3
A03p01640 Brassica napus HOM05D000149 ORTHO05D000076 2.0e-11 72.0 47 74.5
BraA03t09539Z Brassica rapa HOM05D000149 ORTHO05D000076 2.0e-11 72.0 52 65.4
C03p02000 Brassica napus HOM05D000149 ORTHO05D000076 4.5e-11 70.9 47 74.5
BcaC06g32148 Brassica carinata HOM05D000149 ORTHO05D000076 1.0e-10 69.7 52 67.3
Thhalv10013754m.g Eutrema salsugineum HOM05D000149 ORTHO05D000076 1.0e-10 69.7 52 65.4
Sp6g38360 Schrenkiella parvula HOM05D000149 ORTHO05D000076 3.2e-09 64.7 52 67.3
AT5G04370 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 7.2e-09 63.5 46 67.4
A09p05590 Brassica napus HOM05D000149 ORTHO05D000076 8.0e-08 60.1 54 63.0
A10p31700 Brassica napus HOM05D000149 ORTHO05D000076 8.0e-08 60.1 47 66.0
BraA10t45217Z Brassica rapa HOM05D000149 ORTHO05D000076 8.0e-08 60.1 47 66.0
AL6G14010 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 1.0e-07 59.7 52 63.5
CARHR099850 Cardamine hirsuta HOM05D000149 ORTHO05D000076 1.8e-07 58.9 46 69.6
C09p06160 Brassica napus HOM05D000149 ORTHO05D000076 5.2e-07 57.4 54 59.3
BraA09t36200Z Brassica rapa HOM05D000149 ORTHO05D000076 2.6e-06 55.1 44 68.2
Carub.0006s0332 Capsella rubella HOM05D000149 ORTHO05D000076 2.6e-06 55.1 44 61.4
BolC9t53536H Brassica oleracea HOM05D000149 ORTHO05D000076 4.4e-06 54.3 44 65.9
Aa31LG3G4840 Aethionema arabicum HOM05D000149 ORTHO05D000076 7.5e-06 53.5 52 53.8
C09p72390 Brassica napus HOM05D000149 ORTHO05D000076 9.7e-06 53.1 44 65.9
BolC9t59982H Brassica oleracea HOM05D000149 ORTHO05D000076 9.7e-06 53.1 44 65.9


User provided reference genes

Program Settings