Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 2.6e-200 701.8 349 100.0
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 4.2e-190 667.9 348 94.5
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 4.2e-190 667.9 348 94.5
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 9.6e-187 656.8 351 92.9
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.4e-185 652.9 350 92.6
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 3.1e-185 651.7 329 96.7
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.7e-175 619.4 350 87.1
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 2.5e-174 615.5 351 87.5
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.6e-173 612.8 352 86.1
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.1e-173 612.5 348 86.2
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 7.4e-171 604.0 337 87.8
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.6e-165 586.3 333 86.2
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.5e-163 578.9 341 82.7
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.8e-148 529.6 338 77.2
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 6.8e-132 474.6 337 68.8
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 8.8e-132 474.2 322 71.1
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.5e-131 473.4 322 70.8
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.5e-131 473.4 337 68.0
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 5.7e-131 471.5 343 67.6
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 7.5e-131 471.1 322 70.2
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.7e-130 469.9 343 67.6
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.7e-130 469.9 337 67.7
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 1.1e-129 467.2 342 67.3
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 4.1e-129 465.3 322 69.3
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 7.0e-129 464.5 322 70.8
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.6e-128 463.4 313 71.6
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 5.9e-128 461.5 317 70.3
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 5.9e-128 461.5 323 69.0
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 7.7e-128 461.1 322 69.6
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 7.7e-128 461.1 330 67.0
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 1.0e-127 460.7 337 67.4
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 2.2e-127 459.5 316 70.6
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 5.0e-127 458.4 323 69.0
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 2.5e-126 456.1 333 66.1
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.5e-126 456.1 340 64.7
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.2e-126 455.7 316 69.6
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 3.2e-126 455.7 316 70.6
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 4.2e-126 455.3 340 65.6
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 1.2e-125 453.8 333 65.8
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.2e-125 453.8 332 66.0
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 6.1e-125 451.4 333 66.1
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 6.1e-125 451.4 329 67.5
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 8.0e-125 451.1 316 69.3
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.0e-124 450.7 323 68.1
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.4e-124 450.3 328 67.7
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 8.8e-124 447.6 334 63.8
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 2.0e-123 446.4 325 66.5
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 2.0e-123 446.4 320 68.1
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 3.4e-123 445.7 322 66.1
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 4.4e-123 445.3 317 67.8
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 5.7e-123 444.9 328 65.2
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 5.7e-123 444.9 319 67.1
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 9.8e-123 444.1 326 65.0
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.7e-122 443.4 343 64.4
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 4.9e-122 441.8 334 63.5
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.4e-121 440.3 333 65.5
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.4e-121 440.3 328 65.2
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.4e-121 440.3 322 65.2
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 3.1e-121 439.1 322 64.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 3.1e-121 439.1 329 64.4
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 1.2e-120 437.2 317 65.0
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.6e-120 436.8 323 65.6
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 2.0e-120 436.4 316 66.5
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 2.0e-120 436.4 308 67.5
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 2.7e-120 436.0 316 65.5
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 4.5e-120 435.3 317 65.9
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 7.8e-120 434.5 313 65.8
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 1.0e-119 434.1 331 66.2
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 2.3e-119 433.0 326 63.2
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 8.6e-119 431.0 322 65.2
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 8.6e-119 431.0 323 63.8
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.5e-118 429.5 314 65.0
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 4.3e-118 428.7 317 64.0
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 5.6e-118 428.3 317 64.4
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 9.5e-118 427.6 323 63.8
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 3.6e-117 425.6 317 62.8
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 6.1e-117 424.9 308 65.3
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 3.0e-116 422.5 337 62.3
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.2e-115 420.6 327 62.1
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 2.0e-115 419.9 338 65.1
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.0e-115 419.9 334 62.0
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.9e-114 416.0 350 60.3
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.9e-114 416.0 309 66.0
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 2.0e-112 409.8 317 63.1
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 7.3e-110 401.4 321 61.1
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 2.3e-108 396.4 322 62.1
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 4.0e-108 395.6 323 60.4
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.3e-106 387.9 329 58.4
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 3.7e-98 362.5 340 54.7
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 5.1e-95 352.1 320 56.6
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.5e-94 349.7 305 58.0
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.6e-93 347.1 302 60.6
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 3.6e-93 345.9 306 56.5
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.7e-85 318.9 346 50.3
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.2e-85 318.5 308 54.9
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 1.1e-81 307.8 316 49.4
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.0e-79 299.7 203 71.4
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.6e-77 292.7 256 58.6
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.2e-75 287.7 201 67.2
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 5.8e-67 258.8 224 60.3
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.0e-63 248.1 187 62.0
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.8e-63 247.3 157 75.8
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.5e-59 232.6 164 66.5
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 7.6e-59 231.9 130 82.3
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 2.9e-58 229.9 176 61.9
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.6e-53 214.2 282 46.1
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.5e-51 207.6 156 66.0
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.3e-47 193.7 245 45.7
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.4e-43 179.9 160 55.6
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 4.4e-38 162.9 86 83.7
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.5e-35 154.5 121 61.2
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.2e-33 146.7 150 52.0
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.4e-22 109.8 138 46.4
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.0e-18 98.6 72 65.3
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.9e-18 97.1 92 50.0
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 5.2e-15 86.3 159 37.7
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 4.8e-13 79.7 70 55.7
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 1.4e-12 78.2 171 32.7
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 6.8e-07 59.3 178 29.8


User provided reference genes

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