Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 8.6e-159 563.9 356 100.0
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 5.0e-106 388.7 403 66.7
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 1.5e-94 350.5 386 66.6
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 1.6e-91 340.5 381 60.1
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 4.5e-91 339.0 399 61.4
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 5.9e-91 338.6 381 59.8
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 1.3e-90 337.4 381 59.8
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 1.5e-89 334.0 388 60.3
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 8.0e-88 328.2 378 57.9
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 8.0e-88 328.2 378 57.9
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 1.2e-83 314.3 383 60.3
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 1.6e-80 303.9 387 55.3
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 1.2e-78 297.7 431 49.9
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 1.3e-61 241.1 440 43.2
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 2.0e-46 190.7 179 68.2
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 3.2e-44 183.3 221 51.6
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 2.7e-43 180.3 428 36.0
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 3.5e-43 179.9 425 37.2
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 4.6e-43 179.5 429 36.4
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 4.6e-43 179.5 431 33.9
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 5.1e-42 176.0 439 37.8
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 3.3e-41 173.3 299 44.1
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 1.2e-40 171.4 214 48.1
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 2.1e-40 170.6 425 35.8
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 8.1e-40 168.7 255 41.6
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 1.4e-39 167.9 255 41.2
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 2.4e-39 167.2 291 43.0
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 6.8e-39 165.6 396 35.9
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 6.8e-39 165.6 255 41.2
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.5e-38 164.5 255 40.0
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 2.0e-38 164.1 318 39.9
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 3.4e-38 163.3 226 45.6
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 3.4e-38 163.3 425 35.5
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 3.4e-38 163.3 202 50.0
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 7.6e-38 162.2 327 41.0
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 7.6e-38 162.2 241 44.8
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 1.7e-37 161.0 292 42.5
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 2.2e-37 160.6 433 34.2
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 4.2e-36 156.4 255 38.8
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 2.7e-35 153.7 405 34.3
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 3.5e-35 153.3 224 43.3
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 3.5e-35 153.3 226 42.5
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 3.5e-35 153.3 202 47.5
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 7.8e-35 152.1 199 47.7
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 1.3e-34 151.4 444 33.8
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 2.3e-34 150.6 196 50.0
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 3.0e-34 150.2 411 33.3
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 8.7e-34 148.7 212 44.3
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 8.7e-34 148.7 417 33.3
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 1.1e-33 148.3 267 42.7
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 3.3e-33 146.7 250 42.8
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 5.6e-33 146.0 330 35.8
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 7.3e-33 145.6 419 32.9
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 3.6e-32 143.3 208 45.2
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 4.8e-32 142.9 192 46.4
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 6.2e-32 142.5 199 47.7
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 6.2e-32 142.5 199 47.7
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 8.1e-32 142.1 301 34.9
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 4.0e-31 139.8 308 38.0
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 2.0e-30 137.5 188 45.7
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 7.6e-30 135.6 275 38.5
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 7.6e-30 135.6 247 38.5
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 7.6e-30 135.6 413 30.8
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 1.7e-29 134.4 199 42.2
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 2.9e-29 133.7 438 29.0
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 3.8e-29 133.3 422 30.6
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 4.9e-29 132.9 164 48.8
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 4.9e-29 132.9 309 35.9
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 6.4e-29 132.5 222 40.5
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 1.4e-28 131.3 435 29.4
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 2.4e-28 130.6 222 37.8
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 1.2e-27 128.3 216 43.5
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 4.6e-27 126.3 311 31.8
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 2.3e-26 124.0 233 37.8
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 3.9e-26 123.2 237 35.9
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 3.9e-26 123.2 212 41.0
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 3.9e-26 123.2 423 31.2
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 1.1e-25 121.7 206 39.8
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 1.5e-25 121.3 384 28.6
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 2.5e-25 120.6 409 29.3
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 2.5e-25 120.6 414 29.7
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 3.3e-25 120.2 375 31.2
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 3.3e-25 120.2 440 28.6
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 2.1e-24 117.5 307 39.7
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 2.8e-24 117.1 216 39.4
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 2.4e-23 114.0 412 30.3
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 6.9e-23 112.5 235 36.2
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 1.2e-22 111.7 444 28.2
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 2.0e-22 110.9 385 30.4
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 2.6e-22 110.5 234 35.9
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 8.4e-21 105.5 304 31.9
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 5.5e-20 102.8 240 35.4
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 3.5e-19 100.1 200 38.0
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 1.0e-18 98.6 232 35.8
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 2.3e-18 97.4 290 32.4
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 3.9e-18 96.7 195 38.5
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 5.1e-18 96.3 165 41.2
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.6e-16 91.3 136 47.8
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 3.7e-16 90.1 122 50.0
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 3.7e-16 90.1 413 26.6
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 3.7e-16 90.1 217 32.3
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 1.8e-15 87.8 433 27.3
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 2.2e-13 80.9 299 28.8
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 6.0e-11 72.8 106 46.2
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 2.5e-09 67.4 170 32.4
Ah.01g015540 Amaranthus hybridus HOM05D006668 ORTHO05D008252 7.4e-09 65.9 141 41.1
Mapoly0050s0110 Marchantia polymorpha HOM05D006668 ORTHO05D008252 7.4e-09 65.9 247 27.9
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 2.6e-06 57.4 103 34.0


User provided reference genes

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