Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31430 Brassica carinata HOM05D009070 ORTHO05D010560 1.0e-75 286.6 134 100.0
BcaC06g31338 Brassica carinata HOM05D009070 ORTHO05D010560 1.1e-74 283.1 134 98.5
C07p30530 Brassica napus HOM05D009070 ORTHO05D010560 2.6e-60 235.3 131 84.7
A06p45440 Brassica napus HOM05D009070 ORTHO05D010560 7.7e-60 233.8 131 84.7
BcaC06g34305 Brassica carinata HOM05D009070 ORTHO05D010560 1.0e-59 233.4 131 83.2
BolC7t43595H Brassica oleracea HOM05D009070 ORTHO05D010560 1.0e-59 233.4 131 84.0
BraA06t27412Z Brassica rapa HOM05D009070 ORTHO05D010560 1.3e-59 233.0 131 84.7
Thhalv10001063m.g Eutrema salsugineum HOM05D009070 ORTHO05D010560 9.5e-42 173.7 124 59.7
BolC7t43665H Brassica oleracea HOM05D009070 ORTHO05D010560 1.1e-37 160.2 132 59.1
C07p31240 Brassica napus HOM05D009070 ORTHO05D010560 2.4e-37 159.1 127 59.1
A06p44940 Brassica napus HOM05D009070 ORTHO05D010560 4.1e-37 158.3 132 59.1
BraA06t27365Z Brassica rapa HOM05D009070 ORTHO05D010560 4.1e-37 158.3 132 59.1
BcaC06g31365 Brassica carinata HOM05D009070 ORTHO05D010560 7.0e-37 157.5 111 64.9
Sp2g12310 Schrenkiella parvula HOM05D009070 ORTHO05D010560 4.6e-36 154.8 124 58.9
BcaC06g31339 Brassica carinata HOM05D009070 ORTHO05D010560 2.5e-34 149.1 132 58.3
BcaC03g16907 Brassica carinata HOM05D009070 ORTHO05D010560 2.1e-33 146.0 123 54.5
AT5G47600 Arabidopsis thaliana HOM05D009070 ORTHO05D010560 4.0e-32 141.7 98 63.3
BcaC06g31355 Brassica carinata HOM05D009070 ORTHO05D010560 1.5e-31 139.8 129 56.6
AL8G10370 Arabidopsis lyrata HOM05D009070 ORTHO05D010560 3.4e-31 138.7 98 63.3
C02p48100 Brassica napus HOM05D009070 ORTHO05D010560 7.5e-31 137.5 126 52.4
A02p30520 Brassica napus HOM05D009070 ORTHO05D010560 2.2e-30 136.0 123 51.2
BraA02t08070Z Brassica rapa HOM05D009070 ORTHO05D010560 2.2e-30 136.0 123 51.2
CARHR173750 Cardamine hirsuta HOM05D009070 ORTHO05D010560 8.3e-30 134.0 98 60.2
BolC2t10841H Brassica oleracea HOM05D009070 ORTHO05D010560 1.1e-29 133.7 126 52.4
Carub.0008s0019 Capsella rubella HOM05D009070 ORTHO05D010560 2.4e-29 132.5 103 59.2
CARHR173720 Cardamine hirsuta HOM05D009070 ORTHO05D010560 1.6e-28 129.8 103 57.3
THA.LOC104812801 Tarenaya hassleriana HOM05D009070 ORTHO05D010560 8.6e-27 124.0 97 51.5
Aa31LG9G5420 Aethionema arabicum HOM05D009070 ORTHO05D010560 3.3e-26 122.1 95 57.9
BcaC05g26794 Brassica carinata HOM05D009070 ORTHO05D010560 4.9e-14 81.6 100 46.0
Actinidia02127 Actinidia chinensis HOM05D009070 ORTHO05D010560 1.7e-11 73.2 95 31.6
C03p42220 Brassica napus HOM05D009070 ORTHO05D010560 1.7e-11 73.2 72 47.2
Rhsim05G0054600 Rhododendron simsii HOM05D009070 ORTHO05D010560 5.6e-10 68.2 95 30.5
BcaB08g35845 Brassica carinata HOM05D009070 ORTHO05D010560 1.4e-08 63.5 50 64.0
Sabra03G0046400 Salix brachista HOM05D009070 ORTHO05D010560 2.4e-08 62.8 108 31.5
vmacro20795 Vaccinium macrocarpon HOM05D009070 ORTHO05D010560 7.6e-07 57.8 99 33.3
AT1G12180 Arabidopsis thaliana HOM05D037278 ORTHO05D031405 6.4e-06 54.7 76 39.5
Dinv39137 Davidia involucrata HOM05D001099 ORTHO05D010560 8.4e-06 54.3 96 30.2


User provided reference genes

Program Settings