Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31427 Brassica carinata HOM05D008727 ORTHO05D011379 2.6e-98 362.1 188 100.0
BcaC06g34300 Brassica carinata HOM05D008727 ORTHO05D011379 2.5e-72 275.8 186 75.3
BraA06t27409Z Brassica rapa HOM05D008727 ORTHO05D011379 2.5e-72 275.8 186 74.7
A06p45410 Brassica napus HOM05D008727 ORTHO05D011379 4.2e-72 275.0 182 75.3
C07p30610 Brassica napus HOM05D008727 ORTHO05D011379 4.2e-72 275.0 188 74.5
BolC7t43601H Brassica oleracea HOM05D008727 ORTHO05D011379 4.2e-72 275.0 188 74.5
C07p30620 Brassica napus HOM05D008727 ORTHO05D011379 1.1e-64 250.4 183 71.6
A06p45400 Brassica napus HOM05D008727 ORTHO05D011379 7.2e-64 247.7 183 71.0
BraA06t27408Z Brassica rapa HOM05D008727 ORTHO05D011379 7.2e-64 247.7 183 71.0
BcaC06g31426 Brassica carinata HOM05D008727 ORTHO05D011379 2.1e-63 246.1 181 69.6
BolC7t43602H Brassica oleracea HOM05D008727 ORTHO05D011379 2.8e-63 245.7 183 70.5
BcaC06g34299 Brassica carinata HOM05D008727 ORTHO05D011379 4.7e-63 245.0 181 71.3
BcaB07g30480 Brassica carinata HOM05D008727 ORTHO05D011379 2.4e-59 232.6 183 65.0
A06p45420 Brassica napus HOM05D008727 ORTHO05D011379 7.8e-58 227.6 173 67.6
BraA06t27410Z Brassica rapa HOM05D008727 ORTHO05D011379 7.8e-58 227.6 173 67.6
BolC9t60173H Brassica oleracea HOM05D008727 ORTHO05D011379 3.8e-57 225.3 177 65.5
C09p74390 Brassica napus HOM05D008727 ORTHO05D011379 1.5e-56 223.4 177 65.5
BcaC06g31428 Brassica carinata HOM05D008727 ORTHO05D011379 4.3e-56 221.9 161 70.2
BraA10t45379Z Brassica rapa HOM05D008727 ORTHO05D011379 1.1e-51 207.2 177 61.6
A10p33490 Brassica napus HOM05D008727 ORTHO05D011379 9.2e-51 204.1 177 61.6
Thhalv10001116m.g Eutrema salsugineum HOM05D008727 ORTHO05D011379 3.0e-49 199.1 180 57.8
BcaNung04448 Brassica carinata HOM05D008727 ORTHO05D011379 1.2e-47 193.7 138 71.0
Carub.0002s0896 Capsella rubella HOM05D008727 ORTHO05D011379 4.4e-45 185.3 180 52.8
AL1G65050 Arabidopsis lyrata HOM05D008727 ORTHO05D011379 1.3e-44 183.7 186 52.7
Sp2g11770 Schrenkiella parvula HOM05D008727 ORTHO05D011379 1.2e-42 177.2 180 52.2
AT1G54620 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 2.7e-42 176.0 180 52.8
AT5G46980 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 1.2e-39 167.2 180 51.7
Sp2g11780 Schrenkiella parvula HOM05D008727 ORTHO05D001261 2.8e-39 166.0 180 51.1
AT5G46990 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 8.9e-38 161.0 180 48.9
Thhalv10001202m.g Eutrema salsugineum HOM05D008727 ORTHO05D001261 1.2e-37 160.6 181 48.6
Carub.0008s0086 Capsella rubella HOM05D008727 ORTHO05D011379 1.3e-36 157.1 180 46.7
Carub.0008s0084 Capsella rubella HOM05D008727 ORTHO05D011379 6.4e-36 154.8 180 46.7
Carub.0008s0088 Capsella rubella HOM05D008727 ORTHO05D011379 2.1e-34 149.8 166 50.6
BcaC03g16915 Brassica carinata HOM05D008727 ORTHO05D023847 6.0e-34 148.3 176 47.7
C02p48180 Brassica napus HOM05D008727 ORTHO05D023847 6.0e-34 148.3 176 47.7
Sp2g11790 Schrenkiella parvula HOM05D008727 ORTHO05D001261 6.0e-34 148.3 180 46.7
BolC2t10850H Brassica oleracea HOM05D008727 ORTHO05D023847 7.8e-34 147.9 176 47.7
BraA02t08079Z Brassica rapa HOM05D008727 ORTHO05D023847 3.0e-33 146.0 176 47.7
A02p30610 Brassica napus HOM05D008727 ORTHO05D023847 3.9e-33 145.6 176 47.7
CARHR055710 Cardamine hirsuta HOM05D008727 ORTHO05D011379 6.8e-30 134.8 177 44.1
BcaC06g34301 Brassica carinata HOM05D008727 ORTHO05D011379 1.2e-26 124.0 122 56.6
Carub.0008s0089 Capsella rubella HOM05D001445 ORTHO05D001261 2.0e-21 106.7 181 38.7
Aa31LG9G5990 Aethionema arabicum HOM05D001445 ORTHO05D001261 1.9e-19 100.1 174 37.4
AL8G11310 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.9e-19 100.1 181 37.0
Aa31sc241G60 Aethionema arabicum HOM05D001445 ORTHO05D001261 2.7e-18 96.3 182 34.6
AL8G11340 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 6.0e-18 95.1 182 34.1
AT5G46930 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 1.3e-17 94.0 182 35.2
AL8G11300 Arabidopsis lyrata HOM05D008727 ORTHO05D011379 1.1e-16 90.9 137 38.7
Aa31sc241G40 Aethionema arabicum HOM05D001445 ORTHO05D001261 1.9e-16 90.1 182 32.4
Carub.0008s0092 Capsella rubella HOM05D001445 ORTHO05D001261 4.3e-16 89.0 182 33.0
CARHR174500 Cardamine hirsuta HOM05D001445 ORTHO05D001261 7.3e-16 88.2 181 34.8
AL8G11330 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.3e-15 87.4 181 33.1
BcaB07g30808 Brassica carinata HOM05D001445 ORTHO05D001261 1.3e-15 87.4 181 34.8
AT5G46970 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 1.6e-15 87.0 171 35.7
C03p62420 Brassica napus HOM05D001445 ORTHO05D001261 2.1e-15 86.7 181 32.6
AT5G46940 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 6.2e-15 85.1 181 33.7
A02p30560 Brassica napus HOM05D001445 ORTHO05D001261 6.2e-15 85.1 180 33.9
Sp2g11760 Schrenkiella parvula HOM05D001445 ORTHO05D001261 6.2e-15 85.1 181 33.1
Carub.0008s0090 Capsella rubella HOM05D001445 ORTHO05D001261 8.1e-15 84.7 181 33.7
BolC3t18500H Brassica oleracea HOM05D001445 ORTHO05D001261 2.4e-14 83.2 181 32.0
BraA02t08076Z Brassica rapa HOM05D001445 ORTHO05D001261 4.0e-14 82.4 183 34.4
A02p30590 Brassica napus HOM05D001445 ORTHO05D001261 5.3e-14 82.0 181 32.6
CARHR174480 Cardamine hirsuta HOM05D001445 ORTHO05D001261 6.9e-14 81.6 160 34.4
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 9.0e-14 81.3 181 33.1
TWI15G1112 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 9.0e-14 81.3 189 29.1
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 1.2e-13 80.9 181 33.1
Sp2g11740 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.2e-13 80.9 181 30.4
A02p30580 Brassica napus HOM05D001445 ORTHO05D001261 2.0e-13 80.1 183 33.9
CANSAT21G0328 Cannabis sativa HOM05D001445 ORTHO05D001261 1.7e-12 77.0 163 28.8
BolC7t43597H Brassica oleracea HOM05D008727 ORTHO05D040202 2.9e-12 76.3 58 62.1
BraA02t08073Z Brassica rapa HOM05D001445 ORTHO05D001261 4.9e-12 75.5 183 32.8
Thhalv10001199m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 1.1e-11 74.3 181 30.9
COL.COLO4_17127 Corchorus olitorius HOM05D001445 ORTHO05D001261 1.9e-11 73.6 139 31.7
AL8G11320 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 2.4e-11 73.2 180 30.0
Sp2g11750 Schrenkiella parvula HOM05D001445 ORTHO05D001261 3.2e-11 72.8 178 30.9
C07p30580 Brassica napus HOM05D008727 ORTHO05D040202 5.4e-11 72.0 53 64.2
Duzib084G0977 Durio zibethinus HOM05D001445 ORTHO05D001261 2.7e-10 69.7 119 33.6
Prupe.5G048900 Prunus persica HOM05D001445 ORTHO05D001261 4.6e-10 68.9 176 25.6
COL.COLO4_17126 Corchorus olitorius HOM05D001445 ORTHO05D001261 6.0e-10 68.6 132 32.6
Thhalv10001105m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 1.3e-09 67.4 181 28.7
MD06G1042400 Malus domestica HOM05D001445 ORTHO05D001261 1.3e-09 67.4 178 25.3
A06p45680 Brassica napus HOM05D001445 ORTHO05D001261 1.8e-09 67.0 184 30.4
BraA02t08078Z Brassica rapa HOM05D001445 ORTHO05D001261 2.3e-09 66.6 181 29.3
BcaB01g05448 Brassica carinata HOM05D001445 ORTHO05D001261 8.7e-09 64.7 176 27.3
BraA06t27437Z Brassica rapa HOM05D001445 ORTHO05D001261 1.1e-08 64.3 184 29.9
Psat4g219240 Pisum sativum HOM05D001445 ORTHO05D001261 1.1e-08 64.3 165 27.3
BcaB08g36203 Brassica carinata HOM05D001445 ORTHO05D001261 3.3e-08 62.8 181 29.8
BcaC01g02648 Brassica carinata HOM05D001445 ORTHO05D001261 3.3e-08 62.8 169 30.2
Glyma.17G151200 Glycine max HOM05D001445 ORTHO05D001261 3.3e-08 62.8 180 26.1
Ciclev10033644m.g Citrus clementina HOM05D001445 ORTHO05D001261 4.3e-08 62.4 180 25.6
Duzib205G0415 Durio zibethinus HOM05D001445 ORTHO05D001261 4.3e-08 62.4 164 28.7
Thecc.01G402600 Theobroma cacao HOM05D001445 ORTHO05D001261 1.6e-07 60.5 163 25.8
Dinv28905 Davidia involucrata HOM05D001445 ORTHO05D001261 3.7e-07 59.3 129 28.7
Phvul.010G041500 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 4.8e-07 58.9 165 24.2
AT5G46960 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 6.2e-07 58.5 180 26.7
AT5G46950 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 1.4e-06 57.4 181 28.7
Gohir.A08G140800 Gossypium hirsutum HOM05D001445 ORTHO05D001261 1.4e-06 57.4 146 26.7
Sp2g11730 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.4e-06 57.4 181 28.7
Duzib133G0634 Durio zibethinus HOM05D001445 ORTHO05D001261 1.8e-06 57.0 163 24.5
VMungo0331G1992 Vigna mungo HOM05D001445 ORTHO05D001261 4.0e-06 55.8 164 23.2
TWI81G0308 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 6.9e-06 55.1 181 26.0


User provided reference genes

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