Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31359 Brassica carinata HOM05D004070 ORTHO05D000295 1.1e-40 169.5 86 100.0
BcaC06g31363 Brassica carinata HOM05D000440 ORTHO05D000295 1.1e-40 169.5 86 100.0
BolC7t43667H Brassica oleracea HOM05D000440 ORTHO05D000295 3.5e-37 157.9 86 91.9
C07p31260 Brassica napus HOM05D000440 ORTHO05D000295 1.7e-36 155.6 87 92.0
A06p44920 Brassica napus HOM05D000440 ORTHO05D000295 2.9e-36 154.8 87 92.0
BraA06t27363Z Brassica rapa HOM05D000440 ORTHO05D000295 2.9e-36 154.8 87 92.0
Thhalv10001049m.g Eutrema salsugineum HOM05D000440 ORTHO05D000295 5.5e-27 124.0 86 76.7
A02p31450 Brassica napus HOM05D000440 ORTHO05D000295 7.2e-27 123.6 87 77.0
BraA02t08147Z Brassica rapa HOM05D000440 ORTHO05D000295 7.2e-27 123.6 87 77.0
C02p48780 Brassica napus HOM05D000440 ORTHO05D000295 5.2e-25 117.5 87 74.7
BolC2t10972H Brassica oleracea HOM05D000440 ORTHO05D000295 6.7e-25 117.1 87 74.7
AT5G47610 Arabidopsis thaliana HOM05D000440 ORTHO05D000295 8.8e-25 116.7 85 72.9
AL8G10350 Arabidopsis lyrata HOM05D000440 ORTHO05D000295 4.4e-24 114.4 85 71.8
Carub.0008s0018 Capsella rubella HOM05D000440 ORTHO05D000295 1.1e-22 109.8 84 70.2
Aa31LG9G5410 Aethionema arabicum HOM05D000440 ORTHO05D000295 5.9e-21 104.0 84 61.9
CARHR173710 Cardamine hirsuta HOM05D000440 ORTHO05D000295 8.5e-20 100.1 85 65.9
BcaB04g18407 Brassica carinata HOM05D000440 ORTHO05D000295 2.7e-13 78.6 65 58.5
CARHR223860 Cardamine hirsuta HOM05D000440 ORTHO05D000295 6.6e-12 73.9 66 57.6
Thhalv10026467m.g Eutrema salsugineum HOM05D000440 ORTHO05D000295 6.6e-12 73.9 67 55.2
Thecc.03G213800 Theobroma cacao HOM05D000440 ORTHO05D000295 8.6e-12 73.6 91 44.0
Sp7g16940 Schrenkiella parvula HOM05D000440 ORTHO05D000295 1.5e-11 72.8 66 57.6
Duzib084G0764 Durio zibethinus HOM05D000440 ORTHO05D000295 3.3e-11 71.6 92 41.3
COL.COLO4_10862 Corchorus olitorius HOM05D000440 ORTHO05D000295 4.2e-11 71.2 62 53.2
BcaC07g38046 Brassica carinata HOM05D000440 ORTHO05D000295 1.2e-10 69.7 67 52.2
A08p12960 Brassica napus HOM05D000440 ORTHO05D000295 1.2e-10 69.7 66 54.5
BraA08t33279Z Brassica rapa HOM05D000440 ORTHO05D000295 1.2e-10 69.7 66 54.5
BolC8t48445H Brassica oleracea HOM05D000440 ORTHO05D000295 2.8e-10 68.6 67 50.7
FvH4_5g10181 Fragaria vesca HOM05D000440 ORTHO05D000295 3.6e-10 68.2 57 52.6
Prupe.5G137200 Prunus persica HOM05D000440 ORTHO05D000295 3.6e-10 68.2 76 47.4
Duzib068G0565 Durio zibethinus HOM05D000440 ORTHO05D000295 4.7e-10 67.8 84 44.0
FAN13G2781 Fragaria x ananassa HOM05D000440 ORTHO05D000295 8.0e-10 67.0 57 52.6
Carub.0007s2416 Capsella rubella HOM05D000440 ORTHO05D000295 1.0e-09 66.6 84 47.6
AT4G17245 Arabidopsis thaliana HOM05D000440 ORTHO05D000295 1.4e-09 66.2 86 47.7
BcaC06g31361 Brassica carinata HOM05D000440 ORTHO05D000295 1.4e-09 66.2 37 83.8
BcaC03g16974 Brassica carinata HOM05D000440 ORTHO05D000295 1.8e-09 65.9 86 50.0
Gohir.A09G187200 Gossypium hirsutum HOM05D000440 ORTHO05D000295 1.8e-09 65.9 66 48.5
Gohir.D09G182000 Gossypium hirsutum HOM05D000440 ORTHO05D000295 1.8e-09 65.9 66 48.5
Gorai.006G204000 Gossypium raimondii HOM05D000440 ORTHO05D000295 1.8e-09 65.9 66 48.5
Duzib205G0794 Durio zibethinus HOM05D000440 ORTHO05D000295 2.3e-09 65.5 93 39.8
Gohir.D11G017300 Gossypium hirsutum HOM05D000440 ORTHO05D000295 3.0e-09 65.1 65 52.3
Gorai.007G018200 Gossypium raimondii HOM05D000440 ORTHO05D000295 3.0e-09 65.1 65 52.3
CiPaw.12G073900 Carya illinoinensis HOM05D000440 ORTHO05D000295 4.0e-09 64.7 66 47.0
Haze_09231 Corylus avellana HOM05D000440 ORTHO05D000295 4.0e-09 64.7 91 42.9
FAN18G0946 Fragaria x ananassa HOM05D000440 ORTHO05D000295 4.0e-09 64.7 57 50.9
FAN08G2204 Fragaria x ananassa HOM05D000440 ORTHO05D000295 5.2e-09 64.3 57 49.1
Atru.chr9.2612 Acer truncatum HOM05D000440 ORTHO05D000295 6.8e-09 63.9 61 49.2
RcHm_v2.0_Chr7g0188061 Rosa chinensis HOM05D000440 ORTHO05D000295 8.9e-09 63.5 59 54.2
AL7G37460 Arabidopsis lyrata HOM05D000440 ORTHO05D000295 1.2e-08 63.2 86 46.5
MD06G1127400 Malus domestica HOM05D000440 ORTHO05D000295 1.5e-08 62.8 60 53.3
Manes.01G000500 Manihot esculenta HOM05D000440 ORTHO05D000295 2.6e-08 62.0 86 40.7
Gohir.A08G107600 Gossypium hirsutum HOM05D000440 ORTHO05D000295 1.3e-07 59.7 85 43.5
MD14G1142700 Malus domestica HOM05D000440 ORTHO05D000295 1.3e-07 59.7 56 51.8
TWI60G0295 Tripterygium wilfordii HOM05D000440 ORTHO05D000295 1.3e-07 59.7 82 43.9
Ciclev10021802m.g Citrus clementina HOM05D000440 ORTHO05D000295 2.8e-07 58.5 64 46.9
MELO3C005811.2 Cucumis melo HOM05D000440 ORTHO05D000295 2.8e-07 58.5 52 48.1
ClCG01G001240 Citrullus lanatus HOM05D000440 ORTHO05D000295 3.7e-07 58.2 50 50.0
CiPaw.11G106400 Carya illinoinensis HOM05D000440 ORTHO05D000295 4.9e-07 57.8 64 48.4
Gohir.D08G120700 Gossypium hirsutum HOM05D000440 ORTHO05D000295 4.9e-07 57.8 85 42.4
Gorai.004G127400 Gossypium raimondii HOM05D000440 ORTHO05D000295 4.9e-07 57.8 85 42.4
Potri.001G453800 Populus trichocarpa HOM05D000440 ORTHO05D000295 6.3e-07 57.4 78 43.6
Gohir.A11G017500 Gossypium hirsutum HOM05D000440 ORTHO05D000295 8.3e-07 57.0 65 47.7
MD10G1185300 Malus domestica HOM05D000440 ORTHO05D000295 8.3e-07 57.0 60 51.7
CsaV3_5G001360 Cucumis sativus L. HOM05D000440 ORTHO05D000295 1.4e-06 56.2 50 48.0
Sed0010725 Sechium edule HOM05D000440 ORTHO05D000295 1.4e-06 56.2 48 52.1
TWI81G0616 Tripterygium wilfordii HOM05D000440 ORTHO05D000295 2.4e-06 55.5 88 42.0
Sabra16G0306900 Salix brachista HOM05D000440 ORTHO05D000295 4.1e-06 54.7 99 36.4
CANSAT21G2322 Cannabis sativa HOM05D000440 ORTHO05D000295 5.4e-06 54.3 54 46.3


User provided reference genes

Program Settings