Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 3.0e-162 575.1 281 100.0
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 1.2e-123 446.8 287 79.1
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 1.3e-120 436.8 284 79.2
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 2.6e-118 429.1 286 76.9
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 3.4e-118 428.7 287 77.7
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 1.6e-112 409.8 288 75.0
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 3.7e-112 408.7 289 75.1
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 3.7e-112 408.7 289 75.1
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 1.4e-111 406.8 289 75.1
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 1.1e-84 317.4 281 59.4
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 2.0e-81 306.6 269 60.6
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 2.0e-81 306.6 281 58.0
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 4.4e-81 305.4 268 59.0
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 2.8e-80 302.8 281 57.3
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 1.0e-74 284.3 281 58.0
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 4.4e-73 278.9 271 57.6
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 1.3e-72 277.3 233 60.9
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 4.1e-71 272.3 284 54.2
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 2.7e-70 269.6 281 55.9
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 3.8e-69 265.8 273 52.4
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 1.5e-68 263.8 273 52.7
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 1.5e-68 263.8 273 52.7
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 4.7e-67 258.8 266 52.6
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 1.8e-66 256.9 282 50.0
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 4.0e-66 255.8 269 51.7
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 6.8e-66 255.0 275 51.6
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 2.6e-65 253.1 267 52.4
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 3.4e-65 252.7 273 49.8
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 3.4e-65 252.7 282 50.4
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 5.7e-65 251.9 271 49.4
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 2.8e-64 249.6 273 49.8
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 2.8e-64 249.6 273 49.8
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 2.8e-64 249.6 273 49.8
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 3.7e-64 249.2 268 51.1
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 3.1e-63 246.1 278 50.4
THA.LOC104798375 Tarenaya hassleriana HOM05D008086 ORTHO05D004972 5.4e-63 245.4 239 53.6
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 1.2e-62 244.2 246 52.0
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 1.6e-62 243.8 240 54.2
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 2.9e-61 239.6 258 51.2
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 2.8e-59 233.0 282 48.6
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 1.5e-57 227.3 227 53.7
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 3.4e-57 226.1 270 47.4
A06p45430 Brassica napus HOM05D008086 ORTHO05D004972 1.3e-56 224.2 248 50.0
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 4.1e-55 219.2 241 49.8
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 5.4e-55 218.8 269 46.8
BraA02t08071Z Brassica rapa HOM05D008086 ORTHO05D004972 7.0e-55 218.4 269 46.8
AT5G47590 Arabidopsis thaliana HOM05D008086 ORTHO05D004972 1.9e-52 210.3 163 66.9
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 4.0e-50 202.6 234 48.3
BraA02t08035Z Brassica rapa HOM05D008086 ORTHO05D004972 4.0e-50 202.6 282 43.3
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 8.9e-50 201.4 231 47.6
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 1.6e-46 190.7 278 41.7
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 1.3e-45 187.6 229 46.7
BcaC06g34304 Brassica carinata HOM05D008086 ORTHO05D004972 3.9e-45 186.0 249 44.2
C02p47660 Brassica napus HOM05D008086 ORTHO05D004972 5.0e-45 185.7 255 44.3
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 5.6e-44 182.2 278 41.0
BcaB07g30809 Brassica carinata HOM05D008086 ORTHO05D004972 1.6e-43 180.6 254 42.1
C02p48110 Brassica napus HOM05D008086 ORTHO05D004972 1.5e-41 174.1 213 46.0
BcaC03g16910 Brassica carinata HOM05D008086 ORTHO05D004972 4.0e-34 149.4 257 37.7
A02p30190 Brassica napus HOM05D008086 ORTHO05D004972 6.8e-34 148.7 135 54.8
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 7.6e-33 145.2 272 33.5
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 7.6e-33 145.2 271 32.8
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 3.5e-30 136.3 271 31.7
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-28 131.3 279 30.5
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.5e-28 130.2 268 31.0
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 3.3e-28 129.8 269 31.2
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 1.6e-27 127.5 269 31.2
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 2.1e-27 127.1 273 30.4
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 2.1e-27 127.1 273 30.4
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.8e-27 126.7 269 30.9
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 3.6e-27 126.3 272 30.5
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 4.7e-27 125.9 270 31.1
A02p30540 Brassica napus HOM05D008086 ORTHO05D004972 8.1e-27 125.2 147 47.6
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.0e-26 122.9 275 30.9
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 5.2e-26 122.5 270 30.7
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 6.9e-26 122.1 267 29.2
BraA02t08072Z Brassica rapa HOM05D008086 ORTHO05D004972 2.6e-25 120.2 146 45.9
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 4.4e-25 119.4 258 31.0
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 9.9e-25 118.2 257 31.1
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 9.9e-25 118.2 257 31.1
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 1.3e-24 117.9 269 28.6
Thecc.03G253000 Theobroma cacao HOM05D008086 ORTHO05D004972 1.3e-24 117.9 120 51.7
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 2.9e-24 116.7 256 30.5
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 8.4e-24 115.2 269 29.7
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-23 114.8 263 31.2
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.9e-23 114.0 257 30.4
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 2.4e-23 113.6 263 30.8
QL12p012461 Quercus lobata HOM05D008086 ORTHO05D004972 4.2e-23 112.8 233 31.3
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 5.4e-23 112.5 258 30.2
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 5.4e-23 112.5 286 29.0
QL12p012450 Quercus lobata HOM05D007337 ORTHO05D004972 7.1e-23 112.1 230 31.3
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 9.3e-23 111.7 256 29.3
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 1.6e-22 110.9 271 28.0
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 2.1e-22 110.5 276 29.0
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 2.1e-22 110.5 256 29.7
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 4.6e-22 109.4 280 26.4
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 6.0e-22 109.0 279 30.5
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 7.8e-22 108.6 276 27.5
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-20 104.8 272 30.5
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-20 104.8 280 29.3
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.1e-20 104.8 255 29.0
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.9e-20 104.0 291 27.1
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 2.5e-20 103.6 273 27.8
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 3.3e-20 103.2 254 29.9
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.6e-19 100.9 265 26.8
C07p32950 Brassica napus HOM05D008086 ORTHO05D004972 6.2e-19 99.0 144 38.9
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 1.4e-18 97.8 247 27.1
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 2.4e-18 97.1 262 28.2
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.1e-18 96.7 251 26.3
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 4.0e-18 96.3 281 27.4
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 5.3e-18 95.9 257 26.5
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 1.2e-17 94.7 229 32.8
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.5e-17 94.4 260 25.4
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 2.0e-17 94.0 117 37.6
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 2.6e-17 93.6 115 38.3
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 7.6e-17 92.0 269 24.9
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 7.6e-17 92.0 269 24.9
AT4G16540 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 9.9e-17 91.7 128 38.3
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 9.9e-17 91.7 263 30.8
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 1.7e-16 90.9 233 30.9
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 2.2e-16 90.5 239 28.0
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.2e-16 90.5 284 26.8
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.8e-16 89.7 262 26.7
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 6.4e-16 89.0 258 24.8
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 6.4e-16 89.0 271 29.2
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 1.4e-15 87.8 258 24.0
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.9e-15 87.4 281 25.6
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 1.9e-15 87.4 258 23.6
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 4.2e-15 86.3 258 24.0
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 4.2e-15 86.3 258 24.0
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 9.3e-15 85.1 267 28.5
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 1.6e-14 84.3 249 26.9
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 2.1e-14 84.0 249 26.9
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 2.7e-14 83.6 242 29.8
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.6e-14 82.8 117 35.0
CARHR222970 Cardamine hirsuta HOM05D007337 ORTHO05D004972 6.0e-14 82.4 117 35.9
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 6.0e-14 82.4 268 24.3
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 7.9e-14 82.0 280 25.7
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.0e-13 81.6 266 26.3
CARHR223010 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.1e-12 78.2 78 44.9
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 2.5e-12 77.0 121 33.1
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 3.3e-12 76.6 258 26.0
BolC2t10844H Brassica oleracea HOM05D008086 ORTHO05D041227 4.3e-12 76.3 176 33.0
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 2.1e-11 73.9 270 23.7
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 2.1e-11 73.9 270 23.7
AT4G16555 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 3.7e-11 73.2 133 33.8
C03p62430 Brassica napus HOM05D008086 ORTHO05D004972 3.7e-11 73.2 178 31.5
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 3.7e-11 73.2 121 32.2
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 8.1e-11 72.0 116 32.8
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.1e-10 70.1 275 27.6
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 2.0e-09 67.4 248 25.4
BolC3t18501H Brassica oleracea HOM05D008086 ORTHO05D004972 1.3e-08 64.7 167 29.3
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 1.7e-08 64.3 254 24.0
BolC7t45323H Brassica oleracea HOM05D007337 ORTHO05D004972 3.2e-07 60.1 85 38.8
BolC4t21835H Brassica oleracea HOM05D007337 ORTHO05D004972 1.6e-06 57.8 118 33.9
BolC4t21837H Brassica oleracea HOM05D007337 ORTHO05D004972 1.6e-06 57.8 118 33.9
BolC4t21838H Brassica oleracea HOM05D007337 ORTHO05D004972 1.6e-06 57.8 118 33.9
Sopen08g027190 Solanum pennellii HOM05D001099 ORTHO05D010560 3.5e-06 56.6 256 23.4
BcaC09g50367 Brassica carinata HOM05D007337 ORTHO05D004972 6.0e-06 55.8 188 23.9


User provided reference genes

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