Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31344 Brassica carinata HOM05D030644 ORTHO05D027137 4.4e-46 187.6 92 100.0
BolC7t43689H Brassica oleracea HOM05D030644 ORTHO05D027137 4.4e-46 187.6 92 100.0
C07p31460 Brassica napus HOM05D030644 ORTHO05D027137 3.7e-45 184.5 92 98.9
A08p14430 Brassica napus HOM05D000160 ORTHO05D000496 1.3e-34 149.4 105 70.5
BraA08t33432Z Brassica rapa HOM05D000160 ORTHO05D000496 1.3e-34 149.4 105 70.5
C03p82580 Brassica napus HOM05D000160 ORTHO05D000496 1.9e-33 145.6 105 68.6
BolC3t20496H Brassica oleracea HOM05D000160 ORTHO05D000496 5.5e-33 144.1 105 67.6
BcaB03g11631 Brassica carinata HOM05D000160 ORTHO05D000496 8.0e-32 140.2 94 73.4
BraA06t27347Z Brassica rapa HOM05D030644 ORTHO05D027137 2.3e-10 68.9 37 89.2
BcaB07g33911 Brassica carinata HOM05D000160 ORTHO05D000496 1.2e-08 63.2 50 52.0
BcaC08g42887 Brassica carinata HOM05D000160 ORTHO05D000496 1.2e-08 63.2 76 36.8
C06p01050 Brassica napus HOM05D000160 ORTHO05D000496 1.2e-08 63.2 76 36.8
BolC6t35240H Brassica oleracea HOM05D000160 ORTHO05D000496 1.2e-08 63.2 76 36.8
Thhalv10012364m.g Eutrema salsugineum HOM05D000160 ORTHO05D000496 2.8e-08 62.0 47 55.3
A10p07190 Brassica napus HOM05D000160 ORTHO05D000496 1.0e-07 60.1 90 36.7
BraSC36t46099Z Brassica rapa HOM05D000160 ORTHO05D000496 1.0e-07 60.1 90 36.7
Sp7g18150 Schrenkiella parvula HOM05D000160 ORTHO05D000496 3.0e-07 58.5 94 38.3
AL7G34530 Arabidopsis lyrata HOM05D000160 ORTHO05D000496 6.8e-07 57.4 67 41.8
AT4G19570 Arabidopsis thaliana HOM05D000160 ORTHO05D000496 6.8e-07 57.4 74 36.5


User provided reference genes

Program Settings