Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31339 Brassica carinata HOM05D009070 ORTHO05D010560 2.8e-82 308.5 151 100.0
BcaC06g31365 Brassica carinata HOM05D009070 ORTHO05D010560 3.9e-76 288.1 151 91.4
BolC7t43665H Brassica oleracea HOM05D009070 ORTHO05D010560 1.1e-67 260.0 150 84.0
C07p31240 Brassica napus HOM05D009070 ORTHO05D010560 4.3e-67 258.1 150 83.3
BcaC06g31355 Brassica carinata HOM05D009070 ORTHO05D010560 8.1e-66 253.8 151 84.1
A06p44940 Brassica napus HOM05D009070 ORTHO05D010560 4.0e-65 251.5 150 80.7
BraA06t27365Z Brassica rapa HOM05D009070 ORTHO05D010560 4.0e-65 251.5 150 80.7
Sp2g12310 Schrenkiella parvula HOM05D009070 ORTHO05D010560 2.1e-53 212.6 136 75.0
Thhalv10001063m.g Eutrema salsugineum HOM05D009070 ORTHO05D010560 2.0e-48 196.1 148 61.5
C07p30530 Brassica napus HOM05D009070 ORTHO05D010560 6.7e-44 181.0 149 63.1
BolC7t43595H Brassica oleracea HOM05D009070 ORTHO05D010560 1.1e-43 180.3 149 63.1
BcaC06g34305 Brassica carinata HOM05D009070 ORTHO05D010560 5.7e-43 177.9 149 61.1
A06p45440 Brassica napus HOM05D009070 ORTHO05D010560 1.5e-40 169.9 150 60.0
BraA06t27412Z Brassica rapa HOM05D009070 ORTHO05D010560 7.6e-40 167.5 150 59.3
AL8G10370 Arabidopsis lyrata HOM05D009070 ORTHO05D010560 2.1e-37 159.5 126 57.9
AT5G47600 Arabidopsis thaliana HOM05D009070 ORTHO05D010560 1.8e-36 156.4 133 56.4
BcaC05g26794 Brassica carinata HOM05D009070 ORTHO05D010560 3.3e-35 152.1 117 67.5
Carub.0008s0019 Capsella rubella HOM05D009070 ORTHO05D010560 1.6e-34 149.8 147 51.0
BcaC06g31338 Brassica carinata HOM05D009070 ORTHO05D010560 3.1e-33 145.6 132 59.1
BcaC06g31430 Brassica carinata HOM05D009070 ORTHO05D010560 1.2e-32 143.7 132 58.3
BcaC03g16907 Brassica carinata HOM05D009070 ORTHO05D010560 3.4e-32 142.1 144 52.1
CARHR173720 Cardamine hirsuta HOM05D009070 ORTHO05D010560 4.5e-32 141.7 132 50.8
CARHR173750 Cardamine hirsuta HOM05D009070 ORTHO05D010560 9.4e-30 134.0 126 50.0
C02p48100 Brassica napus HOM05D009070 ORTHO05D010560 1.2e-29 133.7 147 50.3
BraA02t08070Z Brassica rapa HOM05D009070 ORTHO05D010560 1.8e-28 129.8 148 48.0
A02p30520 Brassica napus HOM05D009070 ORTHO05D010560 3.0e-28 129.0 148 47.3
Aa31LG9G5420 Aethionema arabicum HOM05D009070 ORTHO05D010560 1.5e-27 126.7 95 56.8
BolC2t10841H Brassica oleracea HOM05D009070 ORTHO05D010560 9.7e-27 124.0 147 48.3
BcaB08g35845 Brassica carinata HOM05D009070 ORTHO05D010560 4.8e-26 121.7 67 85.1
THA.LOC104812801 Tarenaya hassleriana HOM05D009070 ORTHO05D010560 1.4e-25 120.2 96 50.0
C03p42220 Brassica napus HOM05D009070 ORTHO05D010560 2.1e-13 79.7 86 46.5
Actinidia02127 Actinidia chinensis HOM05D009070 ORTHO05D010560 4.8e-10 68.6 105 27.6
Sabra03G0046400 Salix brachista HOM05D009070 ORTHO05D010560 7.0e-09 64.7 95 34.7
Rhsim05G0054600 Rhododendron simsii HOM05D009070 ORTHO05D010560 9.1e-09 64.3 95 27.4
Dinv39137 Davidia involucrata HOM05D001099 ORTHO05D010560 1.6e-08 63.5 96 30.2
Dinv39135 Davidia involucrata HOM05D009070 ORTHO05D010560 2.7e-08 62.8 108 26.9
Nitab4.5_0008481g0040 Nicotiana tabacum HOM05D008086 ORTHO05D010560 7.7e-08 61.2 121 27.3
vmacro20795 Vaccinium macrocarpon HOM05D009070 ORTHO05D010560 7.7e-08 61.2 97 27.8
Peaxi162Scf00002g01721 Petunia axillaris HOM05D008086 ORTHO05D010560 3.8e-07 58.9 118 26.3
Nitab4.5_0000312g0140 Nicotiana tabacum HOM05D001099 ORTHO05D010560 5.0e-07 58.5 121 26.4
SEGI_13652 Sequoiadendron giganteum HOM05D001099 ORTHO05D000958 5.0e-07 58.5 98 30.6
EL10Ac5g13076 Beta vulgaris HOM05D001099 ORTHO05D000958 6.5e-07 58.2 84 29.8
Oeu038321.1 Olea europaea HOM05D001099 ORTHO05D000958 1.5e-06 57.0 90 28.9
Sopen08g027190 Solanum pennellii HOM05D001099 ORTHO05D010560 1.5e-06 57.0 124 25.0
Manes.14G036000 Manihot esculenta HOM05D001099 ORTHO05D000958 3.2e-06 55.8 101 27.7
CAN.G1218.23 Capsicum annuum HOM05D008086 ORTHO05D010560 4.2e-06 55.5 123 24.4
Atru.chr9.1326 Acer truncatum HOM05D001099 ORTHO05D000958 5.5e-06 55.1 90 26.7
AUR62007509 Chenopodium quinoa HOM05D001099 ORTHO05D000958 7.2e-06 54.7 84 27.4
AUR62039962 Chenopodium quinoa HOM05D001099 ORTHO05D000958 7.2e-06 54.7 84 27.4
MBI05_g10091_MAGBIO Magnolia biondii HOM05D001099 ORTHO05D000958 7.2e-06 54.7 97 24.7
RcHm_v2.0_Chr7g0203041 Rosa chinensis HOM05D001099 ORTHO05D000958 7.2e-06 54.7 90 25.6
PGSC0003DMG400004806 Solanum tuberosum HOM05D008086 ORTHO05D010560 7.2e-06 54.7 124 24.2
Dinv21632 Davidia involucrata HOM05D001099 ORTHO05D000958 9.4e-06 54.3 102 24.5


User provided reference genes

Program Settings