Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 1.4e-157 559.7 307 100.0
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 8.8e-152 540.4 311 96.5
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 8.8e-152 540.4 311 96.5
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 8.8e-152 540.4 311 96.5
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 2.6e-151 538.9 314 96.5
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 4.8e-150 534.6 310 90.6
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 4.8e-150 534.6 314 95.9
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 4.8e-150 534.6 310 89.7
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 5.4e-133 478.0 310 88.4
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 4.4e-127 458.4 257 88.3
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 1.3e-123 446.8 267 93.6
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 1.2e-121 440.3 222 99.1
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 3.7e-118 428.7 267 78.3
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 4.6e-116 421.8 274 75.9
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 1.3e-115 420.2 268 77.6
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 3.9e-115 418.7 267 76.8
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 5.1e-115 418.3 267 77.9
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 6.6e-115 417.9 268 75.4
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.5e-114 416.0 267 76.4
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 7.3e-114 414.5 253 78.3
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 9.5e-114 414.1 267 76.0
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 1.6e-113 413.3 263 77.9
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 2.8e-113 412.5 268 75.4
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 2.8e-113 412.5 268 75.4
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 1.1e-112 410.6 261 77.0
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 1.1e-112 410.6 266 75.9
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 1.4e-112 410.2 263 77.9
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 4.0e-112 408.7 276 73.2
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 1.5e-111 406.8 274 72.6
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 2.6e-111 406.0 286 72.7
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 3.4e-111 405.6 269 75.5
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 4.4e-111 405.2 269 73.2
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 5.8e-111 404.8 273 72.9
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 5.8e-111 404.8 270 74.1
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 7.6e-111 404.4 271 73.1
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 9.9e-111 404.1 256 76.6
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 1.3e-110 403.7 263 76.8
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 1.7e-110 403.3 270 74.4
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 3.7e-110 402.1 270 74.4
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 3.7e-110 402.1 264 76.9
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 3.7e-110 402.1 266 75.2
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 8.4e-110 401.0 255 78.0
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 8.4e-110 401.0 273 72.5
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.1e-109 400.6 268 74.3
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 1.4e-109 400.2 259 74.5
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 1.9e-109 399.8 271 72.7
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 3.2e-109 399.1 250 78.4
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 3.2e-109 399.1 266 73.7
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 4.1e-109 398.7 246 79.7
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 4.1e-109 398.7 252 77.8
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 4.1e-109 398.7 266 74.4
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 9.2e-109 397.5 244 79.9
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 1.2e-108 397.1 246 79.3
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 1.6e-108 396.7 260 73.5
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.6e-108 396.7 272 74.3
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 7.8e-108 394.4 256 76.6
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 1.3e-107 393.7 269 74.0
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 1.3e-107 393.7 287 70.0
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 8.6e-107 391.0 257 74.3
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 1.5e-106 390.2 249 76.7
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 7.3e-106 387.9 258 72.9
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 7.3e-106 387.9 270 72.6
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 1.2e-105 387.1 246 75.2
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 4.0e-104 382.1 261 72.4
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 3.8e-102 375.6 296 66.9
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 3.9e-99 365.5 229 77.7
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 5.1e-99 365.2 234 75.6
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.1e-98 364.0 264 70.8
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 2.5e-98 362.8 252 71.4
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 3.8e-94 349.0 218 75.7
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 8.4e-94 347.8 224 76.3
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 2.4e-93 346.3 217 91.7
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 2.1e-92 343.2 270 65.6
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 1.0e-91 340.9 327 55.7
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 1.3e-91 340.5 224 76.3
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 3.0e-91 339.3 245 76.3
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 5.1e-91 338.6 255 66.7
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 4.8e-89 332.0 257 62.6
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 4.8e-89 332.0 223 72.2
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 4.5e-87 325.5 213 73.7
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 4.9e-86 322.0 205 75.1
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 1.2e-84 317.4 207 72.5
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 4.3e-82 308.9 196 76.0
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 7.4e-82 308.1 260 60.0
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 3.7e-81 305.8 274 58.8
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 4.5e-79 298.9 261 59.8
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.9e-77 293.5 302 54.0
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 7.9e-76 288.1 256 56.2
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 7.9e-76 288.1 209 69.4
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.0e-75 287.7 256 58.2
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 2.3e-75 286.6 167 79.6
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.6e-68 263.8 246 54.5
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 3.9e-67 259.2 208 63.5
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 5.1e-67 258.8 174 70.1
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 6.7e-67 258.5 228 57.9
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 2.9e-62 243.0 181 65.7
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 3.8e-62 242.7 236 54.2
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 2.7e-60 236.5 269 47.2
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 1.0e-46 191.4 145 64.8
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 5.0e-46 189.1 128 71.1
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 5.0e-46 189.1 246 46.3
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 4.7e-44 182.6 94 97.9
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 1.5e-34 151.0 92 81.5
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 3.8e-30 136.3 107 61.7
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.3e-25 121.3 98 55.1
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 7.8e-23 112.1 138 45.7
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-20 103.6 121 47.1
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 1.8e-19 100.9 81 63.0
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 2.0e-18 97.4 60 81.7
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.0e-18 97.4 98 49.0
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 4.4e-18 96.3 56 80.4
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 7.3e-13 79.0 218 29.4
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 8.9e-11 72.0 51 68.6
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 2.9e-09 67.0 47 63.8
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 6.4e-09 65.9 41 70.7
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 5.4e-08 62.8 238 26.5
Ciclev10003790m.g Citrus clementina HOM05D006925 ORTHO05D008830 7.0e-08 62.4 35 88.6
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 7.8e-07 58.9 54 53.7


User provided reference genes

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