Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31156 Brassica carinata HOM05D009656 ORTHO05D011940 4.4e-89 331.6 218 100.0
C07p34100 Brassica napus HOM05D009656 ORTHO05D011940 1.0e-40 171.0 146 100.0
BolC7t43924H Brassica oleracea HOM05D009656 ORTHO05D011940 1.0e-40 171.0 146 100.0
BcaC06g31167 Brassica carinata HOM05D009656 ORTHO05D011940 1.1e-39 167.5 146 97.9
A06p42920 Brassica napus HOM05D009656 ORTHO05D011940 5.5e-39 165.2 145 90.3
Thhalv10004937m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 1.1e-23 114.4 144 81.2
CARHR146130 Cardamine hirsuta HOM05D009656 ORTHO05D011940 6.3e-19 98.6 61 75.4
Sp2g14570 Schrenkiella parvula HOM05D009656 ORTHO05D011940 1.1e-18 97.8 75 69.3
CARHR146250 Cardamine hirsuta HOM05D009656 ORTHO05D011940 1.8e-18 97.1 63 71.4
Thhalv10004969m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 2.4e-18 96.7 63 69.8
AT2G03850 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 5.3e-18 95.5 63 69.8
AL5G13670 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 7.0e-18 95.1 63 71.4
Sp2g14560 Schrenkiella parvula HOM05D009656 ORTHO05D011940 1.2e-17 94.4 63 69.8
Carub.0005s0301 Capsella rubella HOM05D009656 ORTHO05D011940 4.5e-17 92.4 62 69.4
BcaB07g30284 Brassica carinata HOM05D009656 ORTHO05D011940 1.3e-16 90.9 63 66.7
BcaC03g17233 Brassica carinata HOM05D009656 ORTHO05D011940 6.5e-16 88.6 59 69.5
C02p51680 Brassica napus HOM05D009656 ORTHO05D011940 6.5e-16 88.6 59 69.5
C02p51700 Brassica napus HOM05D009656 ORTHO05D011940 6.5e-16 88.6 59 69.5
BolC2t11254H Brassica oleracea HOM05D009656 ORTHO05D011940 6.5e-16 88.6 59 69.5
AL5G13530 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 1.6e-14 84.0 63 65.1
AT2G03740 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 1.6e-14 84.0 63 65.1
A02p33560 Brassica napus HOM05D009656 ORTHO05D011940 2.1e-14 83.6 55 69.1
BraA02t08377Z Brassica rapa HOM05D009656 ORTHO05D011940 2.1e-14 83.6 55 69.1
Carub.0005s0288 Capsella rubella HOM05D009656 ORTHO05D011940 1.0e-13 81.3 63 60.3
Aa31LG1G24350 Aethionema arabicum HOM05D009656 ORTHO05D011940 3.6e-06 56.2 37 62.2


User provided reference genes

Program Settings