Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g31020 Brassica carinata HOM05D005515 ORTHO05D006620 5.6e-52 207.2 97 100.0
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 1.2e-14 83.2 48 87.5
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 1.4e-10 69.7 48 64.6
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 2.6e-09 65.5 67 49.3
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 2.6e-09 65.5 48 66.7
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 3.4e-09 65.1 57 52.6
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 3.4e-09 65.1 48 66.7
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 4.5e-09 64.7 48 60.4
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 5.9e-09 64.3 48 62.5
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 5.9e-09 64.3 48 60.4
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 7.6e-09 63.9 48 64.6
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.0e-08 63.5 48 60.4
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 1.3e-08 63.2 67 49.3
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 1.7e-08 62.8 48 58.3
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 2.9e-08 62.0 49 57.1
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.9e-08 62.0 47 59.6
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 3.8e-08 61.6 48 60.4
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 5.0e-08 61.2 53 52.8
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 6.5e-08 60.8 47 61.7
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 8.5e-08 60.5 48 58.3
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 8.5e-08 60.5 48 58.3
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 1.4e-07 59.7 56 48.2
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.9e-07 59.3 47 55.3
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 1.9e-07 59.3 51 51.0
ClCG08G010060 Citrullus lanatus HOM05D005515 ORTHO05D006620 2.5e-07 58.9 110 33.6
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 2.5e-07 58.9 47 55.3
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 2.5e-07 58.9 47 59.6
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 4.2e-07 58.2 47 59.6
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 9.3e-07 57.0 56 46.4
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 1.2e-06 56.6 48 58.3
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 3.6e-06 55.1 49 51.0
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.6e-06 54.7 51 49.0
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 7.9e-06 53.9 64 51.6
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 7.9e-06 53.9 47 53.2


User provided reference genes

Program Settings