Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g30942 Brassica carinata HOM05D009876 ORTHO05D016048 3.1e-66 255.0 130 100.0
BcaC06g30943 Brassica carinata HOM05D009876 ORTHO05D016048 3.1e-66 255.0 130 100.0
BcaC06g30945 Brassica carinata HOM05D009876 ORTHO05D016048 3.1e-66 255.0 130 100.0
BcaC06g30940 Brassica carinata HOM05D009876 ORTHO05D016048 2.2e-64 248.8 130 93.8
A10p12510 Brassica napus HOM05D009876 ORTHO05D016048 2.1e-54 215.7 122 87.7
BcaC02g10633 Brassica carinata HOM05D009876 ORTHO05D016048 1.9e-47 192.6 128 80.5
C04p26030 Brassica napus HOM05D009876 ORTHO05D016048 1.9e-47 192.6 128 80.5
BolC4t24204H Brassica oleracea HOM05D009876 ORTHO05D016048 1.9e-47 192.6 128 80.5
A03p68660 Brassica napus HOM05D009876 ORTHO05D016048 8.9e-45 183.7 108 86.1
BraSC39t46191Z Brassica rapa HOM05D009876 ORTHO05D016048 8.9e-45 183.7 108 86.1
C05p51200 Brassica napus HOM05D009876 ORTHO05D016048 4.4e-36 154.8 105 81.0
Thhalv10026586m.g Eutrema salsugineum HOM05D009876 ORTHO05D012175 1.4e-18 96.7 123 43.1
Thhalv10026972m.g Eutrema salsugineum HOM05D009876 ORTHO05D012175 1.4e-18 96.7 123 43.1
Carub.0007s1882 Capsella rubella HOM05D009876 ORTHO05D012175 1.9e-15 86.3 130 41.5
AT4G22517 Arabidopsis thaliana HOM05D009876 ORTHO05D012175 7.6e-12 74.3 130 36.9
Thhalv10027036m.g Eutrema salsugineum HOM05D009876 ORTHO05D012175 2.2e-11 72.8 128 40.6
AT4G22513 Arabidopsis thaliana HOM05D009876 ORTHO05D012175 4.9e-11 71.6 130 36.2
AL7G31100 Arabidopsis lyrata HOM05D009876 ORTHO05D012175 4.2e-10 68.6 129 38.8
C01p16830 Brassica napus HOM05D000220 ORTHO05D012175 1.2e-09 67.0 128 37.5
BolC1t01624H Brassica oleracea HOM05D000220 ORTHO05D012175 1.2e-09 67.0 128 37.5
A01p13800 Brassica napus HOM05D000220 ORTHO05D012175 1.6e-09 66.6 128 37.5
BraA01t01326Z Brassica rapa HOM05D000220 ORTHO05D012175 1.6e-09 66.6 128 37.5
CARHR229410 Cardamine hirsuta HOM05D009876 ORTHO05D012175 2.7e-09 65.9 131 37.4
A08p15770 Brassica napus HOM05D021256 ORTHO05D012175 3.5e-09 65.5 129 36.4
BraA08t33556Z Brassica rapa HOM05D021256 ORTHO05D012175 3.5e-09 65.5 129 36.4
Carub.0007s1879 Capsella rubella HOM05D009876 ORTHO05D012175 4.6e-09 65.1 131 36.6
AT4G22520 Arabidopsis thaliana HOM05D009876 ORTHO05D012175 6.6e-08 61.2 131 36.6
BcaC09g51121 Brassica carinata HOM05D000220 ORTHO05D012175 8.7e-08 60.8 128 35.9
AL7G31090 Arabidopsis lyrata HOM05D009876 ORTHO05D012175 1.1e-07 60.5 123 35.0
HPP92_010518 Vanilla planifolia HOM05D000220 ORTHO05D000141 2.5e-07 59.3 100 35.0
AT4G22610 Arabidopsis thaliana HOM05D009876 ORTHO05D012175 4.3e-07 58.5 128 34.4
Carub.0007s1881 Capsella rubella HOM05D000220 ORTHO05D012175 1.3e-06 57.0 134 35.1
Ca_25929_v3 Cicer arietinum L. HOM05D000220 ORTHO05D000141 6.2e-06 54.7 105 32.4


User provided reference genes

Program Settings