Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g30897 Brassica carinata HOM05D011134 ORTHO05D012144 3.0e-133 479.6 499 100.0
BcaC06g33638 Brassica carinata HOM05D011134 ORTHO05D012144 1.7e-91 340.9 226 77.4
BolC7t44286H Brassica oleracea HOM05D011134 ORTHO05D012144 3.5e-89 333.2 220 77.7
A06p40360 Brassica napus HOM05D011134 ORTHO05D012144 5.0e-88 329.3 221 76.9
BraA06t26954Z Brassica rapa HOM05D011134 ORTHO05D012144 5.0e-88 329.3 221 76.9
C07p37690 Brassica napus HOM05D011134 ORTHO05D012144 8.6e-88 328.6 221 77.4
Sp2g17400 Schrenkiella parvula HOM05D011134 ORTHO05D012144 3.3e-63 246.9 222 60.8
BcaB04g19482 Brassica carinata HOM05D011134 ORTHO05D012144 3.9e-56 223.4 235 54.9
C09p03970 Brassica napus HOM05D011134 ORTHO05D012144 6.8e-53 212.6 237 51.9
BolC9t53329H Brassica oleracea HOM05D011134 ORTHO05D012144 6.8e-53 212.6 237 51.9
A09p03770 Brassica napus HOM05D011134 ORTHO05D012144 9.9e-52 208.8 237 50.6
BraA09t36015Z Brassica rapa HOM05D011134 ORTHO05D012144 1.7e-51 208.0 237 50.6
BcaC04g23864 Brassica carinata HOM05D011134 ORTHO05D012144 1.9e-50 204.5 232 50.4
CARHR151750 Cardamine hirsuta HOM05D011134 ORTHO05D012144 5.4e-50 203.0 229 50.2
AL5G18480 Arabidopsis lyrata HOM05D011134 ORTHO05D012144 6.6e-48 196.1 224 50.0
AT3G28750 Arabidopsis thaliana HOM05D011134 ORTHO05D012144 1.9e-47 194.5 224 48.7
Carub.0005s0730 Capsella rubella HOM05D011134 ORTHO05D012144 1.7e-35 154.8 215 47.0
Aa31LG2G4480 Aethionema arabicum HOM05D011134 ORTHO05D012144 3.5e-33 147.1 196 42.9
AT5G39880 Arabidopsis thaliana HOM05D010681 ORTHO05D014389 3.3e-23 114.0 195 35.9
AL7G50260 Arabidopsis lyrata HOM05D010681 ORTHO05D014389 6.3e-22 109.8 231 33.8
Carub.0007s3584 Capsella rubella HOM05D010681 ORTHO05D014389 1.4e-21 108.6 189 36.0
Thhalv10027713m.g Eutrema salsugineum HOM05D010681 ORTHO05D014389 6.5e-19 99.8 195 34.9
CARHR262300 Cardamine hirsuta HOM05D010681 ORTHO05D014389 1.9e-18 98.2 195 33.3
THA.LOC104808337 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 1.0e-16 92.4 234 31.2
THA.LOC104808338 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 1.0e-16 92.4 234 31.2
THA.LOC104808339 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 1.0e-16 92.4 234 31.2
THA.LOC104808340 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 3.0e-16 90.9 234 31.2
Sp7g02160 Schrenkiella parvula HOM05D010681 ORTHO05D014389 3.7e-14 84.0 189 31.2
THA.LOC104805451 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 1.4e-13 82.0 231 29.4
BcaB02g07967 Brassica carinata HOM05D010681 ORTHO05D014389 5.9e-12 76.6 188 30.9
BcaB02g07963 Brassica carinata HOM05D010681 ORTHO05D014389 7.7e-12 76.3 188 30.9
BcaB02g07964 Brassica carinata HOM05D010681 ORTHO05D014389 7.7e-12 76.3 188 30.9
BcaC02g08998 Brassica carinata HOM05D010681 ORTHO05D014389 7.7e-12 76.3 211 29.9
BolC4t26368H Brassica oleracea HOM05D010681 ORTHO05D014389 7.7e-12 76.3 211 29.9
C04p47670 Brassica napus HOM05D010681 ORTHO05D014389 3.8e-11 73.9 188 30.3
A04p13910 Brassica napus HOM05D010681 ORTHO05D014389 1.1e-10 72.4 188 29.3
BraA04t17056Z Brassica rapa HOM05D010681 ORTHO05D014389 1.1e-10 72.4 188 29.3
THA.LOC104823932 Tarenaya hassleriana HOM05D010681 ORTHO05D012144 1.9e-10 71.6 242 28.1


User provided reference genes

Program Settings