Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g30848 Brassica carinata HOM05D000028 ORTHO05D001812 1.1e-28 129.4 69 100.0
BcaC06g30847 Brassica carinata HOM05D000028 ORTHO05D001812 6.4e-26 120.2 64 98.4
BcaC06g33717 Brassica carinata HOM05D000028 ORTHO05D001812 6.4e-26 120.2 64 98.4
A06p39720 Brassica napus HOM05D000028 ORTHO05D001812 6.4e-26 120.2 64 98.4
C07p38550 Brassica napus HOM05D000028 ORTHO05D001812 6.4e-26 120.2 64 98.4
BolC7t44377H Brassica oleracea HOM05D000028 ORTHO05D001812 6.4e-26 120.2 64 98.4
BraA06t26887Z Brassica rapa HOM05D000028 ORTHO05D001812 6.4e-26 120.2 64 98.4
CARHR153430 Cardamine hirsuta HOM05D000028 ORTHO05D001812 1.7e-23 112.1 64 92.2
Sp2g18150 Schrenkiella parvula HOM05D000028 ORTHO05D001812 3.9e-23 110.9 64 90.6
Thhalv10004454m.g Eutrema salsugineum HOM05D000028 ORTHO05D001812 8.6e-23 109.8 64 90.6
A02p37030 Brassica napus HOM05D000028 ORTHO05D001812 1.5e-22 109.0 64 89.1
BraA02t08690Z Brassica rapa HOM05D000028 ORTHO05D001812 1.5e-22 109.0 64 89.1
BcaC03g17611 Brassica carinata HOM05D000028 ORTHO05D001812 1.9e-22 108.6 64 89.1
C02p56040 Brassica napus HOM05D000028 ORTHO05D001812 1.9e-22 108.6 64 89.1
BolC2t11659H Brassica oleracea HOM05D000028 ORTHO05D001812 1.9e-22 108.6 64 89.1
Carub.0005s0858 Capsella rubella HOM05D000028 ORTHO05D001812 3.3e-22 107.8 64 87.5
BcaB04g19527 Brassica carinata HOM05D000028 ORTHO05D001812 4.3e-22 107.5 64 85.9
AL5G20010 Arabidopsis lyrata HOM05D000028 ORTHO05D001812 2.4e-20 101.7 64 81.2
AT3G30340 Arabidopsis thaliana HOM05D000028 ORTHO05D001812 2.4e-20 101.7 64 81.2
BcaC04g23812 Brassica carinata HOM05D000028 ORTHO05D001812 3.1e-20 101.3 64 82.8
BcaC04g23824 Brassica carinata HOM05D000028 ORTHO05D001812 3.1e-20 101.3 64 82.8
A09p04190 Brassica napus HOM05D000028 ORTHO05D001812 3.1e-20 101.3 64 82.8
C09p04410 Brassica napus HOM05D000028 ORTHO05D001812 3.1e-20 101.3 64 82.8
BolC9t53371H Brassica oleracea HOM05D000028 ORTHO05D001812 3.1e-20 101.3 64 82.8
BraA09t36056Z Brassica rapa HOM05D000028 ORTHO05D001812 3.1e-20 101.3 64 82.8
Aa31LG2G3720 Aethionema arabicum HOM05D000028 ORTHO05D001812 6.9e-20 100.1 64 79.7
BcaC04g23818 Brassica carinata HOM05D000028 ORTHO05D011789 2.6e-19 98.2 64 81.2
Aa31LG9G16840 Aethionema arabicum HOM05D000028 ORTHO05D001812 2.1e-16 88.6 62 67.7
THA.LOC104822736 Tarenaya hassleriana HOM05D000028 ORTHO05D001812 1.3e-15 85.9 62 66.1
PGSC0003DMG400005963 Solanum tuberosum HOM05D000028 ORTHO05D001812 1.6e-08 62.4 55 54.5
CAN.G359.2 Capsicum annuum HOM05D000028 ORTHO05D001812 2.1e-08 62.0 55 52.7
Peaxi162Scf00119g01534 Petunia axillaris HOM05D000028 ORTHO05D001812 1.0e-07 59.7 56 53.6
CAN.G1489.1 Capsicum annuum HOM05D000028 ORTHO05D001812 1.3e-07 59.3 57 50.9
Solyc04g007590.3 Solanum lycopersicum HOM05D000028 ORTHO05D001812 1.8e-07 58.9 55 50.9
Sopen04g002670 Solanum pennellii HOM05D000028 ORTHO05D001812 1.8e-07 58.9 55 50.9
Lj9C609T19 Lonicera japonica HOM05D000028 ORTHO05D001812 5.1e-07 57.4 55 49.1
Haze_09221 Corylus avellana HOM05D000028 ORTHO05D001812 8.7e-07 56.6 55 49.1
Carub.0006s3574 Capsella rubella HOM05D000028 ORTHO05D001812 1.5e-06 55.8 55 52.7
Cpa.g.sc14.246 Carica papaya HOM05D000028 ORTHO05D001812 1.9e-06 55.5 58 43.1
Nitab4.5_0004692g0040 Nicotiana tabacum HOM05D000028 ORTHO05D001812 1.9e-06 55.5 58 46.6
Sc01g0002080 Simmondsia chinensis HOM05D000028 ORTHO05D001812 1.9e-06 55.5 55 45.5
Nitab4.5_0000414g0060 Nicotiana tabacum HOM05D000028 ORTHO05D001812 2.5e-06 55.1 55 49.1
Nitab4.5_0001648g0070 Nicotiana tabacum HOM05D000028 ORTHO05D001812 2.5e-06 55.1 59 44.1
EL10Ac1g00158 Beta vulgaris HOM05D000028 ORTHO05D001812 3.3e-06 54.7 55 47.3
AT4G01440 Arabidopsis thaliana HOM05D000028 ORTHO05D001812 4.3e-06 54.3 55 50.9
Glyma.09G284000 Glycine max HOM05D000028 ORTHO05D001812 4.3e-06 54.3 63 42.9
MBI12_g34173_MAGBIO Magnolia biondii HOM05D000028 ORTHO05D001812 4.3e-06 54.3 55 41.8
Sp1g01240 Schrenkiella parvula HOM05D000028 ORTHO05D001812 4.3e-06 54.3 55 49.1
Aa31LG5G1200 Aethionema arabicum HOM05D000028 ORTHO05D001812 5.6e-06 53.9 55 50.9
CiPaw.11G108100 Carya illinoinensis HOM05D000028 ORTHO05D001812 5.6e-06 53.9 55 41.8
Dinv32656 Davidia involucrata HOM05D000028 ORTHO05D001812 5.6e-06 53.9 55 49.1
Nitab4.5_0004092g0030 Nicotiana tabacum HOM05D000028 ORTHO05D001812 5.6e-06 53.9 55 47.3
Potri.014G108500 Populus trichocarpa HOM05D000028 ORTHO05D001812 5.6e-06 53.9 59 45.8
Eucgr.E01098 Eucalyptus grandis HOM05D000028 ORTHO05D001812 7.4e-06 53.5 55 45.5
Potri.002G182700 Populus trichocarpa HOM05D000028 ORTHO05D001812 7.4e-06 53.5 59 44.1
Hund16762 Selenicereus undatus HOM05D000028 ORTHO05D001812 9.6e-06 53.1 55 41.8


User provided reference genes

Program Settings