Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 2.1e-289 998.4 537 100.0
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 4.2e-274 947.6 517 98.5
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 1.4e-261 906.0 520 94.6
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 3.4e-260 901.4 518 94.0
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 4.2e-258 894.4 519 93.3
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 3.7e-246 854.7 517 88.8
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 3.2e-234 815.1 518 81.5
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 1.7e-219 766.1 517 80.5
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 5.2e-216 754.6 518 79.3
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 1.3e-214 750.0 517 77.9
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 4.9e-214 748.0 520 77.5
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 4.6e-204 714.9 492 78.5
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 1.1e-194 683.7 510 73.9
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 3.0e-147 526.2 516 55.0
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 6.7e-147 525.0 515 55.3
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 5.7e-146 521.9 517 55.5
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 4.8e-145 518.8 516 54.7
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 6.3e-145 518.5 521 54.7
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.8e-144 516.9 521 54.5
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 9.1e-144 514.6 514 55.4
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 9.1e-144 514.6 518 52.9
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 2.2e-142 510.0 514 54.7
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 4.7e-140 502.3 521 53.6
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 4.7e-140 502.3 521 53.6
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 1.8e-139 500.4 518 56.6
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 1.8e-139 500.4 516 54.5
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 3.9e-139 499.2 518 52.7
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 6.7e-139 498.4 515 52.2
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 3.1e-136 489.6 481 54.3
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 2.9e-134 483.0 516 53.5
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 6.5e-134 481.9 529 52.0
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 3.2e-133 479.6 538 47.6
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 4.2e-133 479.2 519 53.2
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 6.1e-132 475.3 516 52.1
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 1.1e-130 471.1 521 52.4
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 7.5e-130 468.4 516 49.2
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 1.3e-129 467.6 499 54.7
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 1.7e-129 467.2 520 50.0
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 2.2e-129 466.8 513 50.3
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 4.8e-129 465.7 518 52.3
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.8e-128 463.8 513 49.3
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 2.4e-128 463.4 516 49.8
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 4.1e-128 462.6 513 51.5
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 4.1e-128 462.6 506 50.0
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 9.1e-128 461.5 511 49.9
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 1.6e-127 460.7 514 48.8
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 4.5e-127 459.1 519 51.1
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.0e-126 458.0 515 47.4
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 2.2e-126 456.8 522 52.9
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 3.8e-126 456.1 515 49.3
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 3.8e-126 456.1 433 55.0
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 1.5e-125 454.1 515 47.8
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 2.5e-125 453.4 513 51.3
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 3.2e-125 453.0 517 48.4
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 5.5e-125 452.2 515 47.4
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 7.2e-125 451.8 516 50.0
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.4e-123 447.6 515 48.0
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 1.4e-123 447.6 536 48.1
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 1.8e-123 447.2 498 51.8
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 5.2e-123 445.7 515 47.8
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 8.8e-123 444.9 511 48.3
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 9.8e-122 441.4 504 51.2
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.3e-121 441.0 535 46.5
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 1.7e-121 440.7 528 48.7
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 3.7e-121 439.5 520 48.7
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 8.3e-121 438.3 511 47.4
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 2.4e-120 436.8 521 51.8
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.5e-117 427.6 501 48.9
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 3.2e-117 426.4 519 48.2
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 5.5e-117 425.6 498 48.0
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 1.2e-116 424.5 520 45.6
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 2.1e-116 423.7 512 50.8
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 3.6e-116 422.9 498 47.8
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 8.0e-116 421.8 495 50.1
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 1.0e-115 421.4 497 47.7
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 1.5e-114 417.5 523 50.1
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 5.7e-114 415.6 498 48.2
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 9.8e-114 414.8 520 46.5
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 1.3e-113 414.5 511 50.1
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 1.7e-113 414.1 495 48.3
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 2.8e-113 413.3 509 48.9
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 1.1e-112 411.4 522 44.1
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 2.7e-111 406.8 520 46.2
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 5.9e-111 405.6 513 49.1
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-110 404.4 496 46.6
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.5e-109 401.0 509 49.5
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 2.8e-108 396.7 499 47.1
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 8.0e-108 395.2 496 46.2
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 6.8e-107 392.1 393 53.9
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.5e-106 391.0 503 46.3
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 5.4e-104 382.5 511 44.2
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 5.9e-103 379.0 397 51.1
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 1.0e-102 378.3 500 46.0
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 3.9e-102 376.3 351 55.6
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 9.5e-101 371.7 513 46.2
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 2.2e-97 360.5 497 45.3
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 7.0e-96 355.5 524 42.0
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 1.6e-95 354.4 472 49.2
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.6e-84 317.8 336 50.6
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 2.2e-81 307.4 272 56.2
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 1.5e-74 284.6 394 41.1
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 3.9e-70 270.0 342 46.2
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-66 258.5 200 63.0
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-66 258.5 200 63.0
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 7.6e-66 255.8 556 37.2
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 3.5e-63 246.9 331 47.4
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.3e-62 245.0 220 57.3
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 1.1e-61 241.9 528 33.1
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 5.3e-59 233.0 478 31.6
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 1.3e-52 211.8 215 48.4
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 3.7e-44 183.7 493 33.7
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 2.4e-43 181.0 502 28.5
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 2.3e-30 137.9 198 44.4
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.4e-22 112.1 117 52.1
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 7.4e-21 106.3 116 51.7
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 9.7e-21 105.9 143 40.6
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 2.2e-20 104.8 173 40.5
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 2.8e-20 104.4 177 42.4
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 1.1e-19 102.4 143 39.9
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 3.8e-17 94.0 120 50.0
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 1.9e-16 91.7 224 31.7
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 5.7e-13 80.1 124 41.9
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 1.9e-08 65.1 116 37.9


User provided reference genes

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