Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 7.7e-166 587.0 288 100.0
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 1.5e-161 572.8 289 97.6
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 1.7e-160 569.3 289 96.5
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 2.7e-158 562.0 288 93.4
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 1.1e-156 556.6 288 94.4
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 2.5e-156 555.4 288 94.1
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 4.2e-156 554.7 288 94.1
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 4.7e-155 551.2 288 93.4
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 1.4e-154 549.7 288 92.7
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 1.7e-152 542.7 273 97.4
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 3.1e-151 538.5 273 96.3
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 3.1e-151 538.5 273 96.3
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 3.5e-150 535.0 288 89.6
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 7.3e-148 527.3 284 90.5
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 3.0e-133 478.8 284 81.3
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 2.5e-132 475.7 289 78.2
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 2.5e-132 475.7 283 79.9
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 9.5e-132 473.8 283 79.5
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 1.6e-131 473.0 289 77.5
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 3.1e-130 468.8 289 76.1
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 6.8e-130 467.6 283 77.7
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 8.9e-130 467.2 289 76.1
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 1.2e-129 466.8 285 77.9
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.2e-129 466.8 289 76.1
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.5e-129 466.5 289 75.4
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 5.8e-129 464.5 285 77.5
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 9.8e-129 463.8 285 76.8
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 1.3e-128 463.4 286 76.6
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.2e-128 462.6 285 77.2
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 2.2e-128 462.6 285 77.9
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 4.9e-128 461.5 283 77.0
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 4.9e-128 461.5 285 76.1
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 8.3e-128 460.7 285 76.5
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 1.1e-127 460.3 282 77.7
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 1.4e-127 459.9 285 73.7
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 2.4e-127 459.1 287 76.0
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 7.1e-127 457.6 289 75.1
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 9.2e-127 457.2 289 75.8
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 2.1e-126 456.1 282 77.0
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 3.5e-126 455.3 286 74.5
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 3.5e-126 455.3 285 75.4
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 6.0e-126 454.5 284 76.4
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 6.0e-126 454.5 284 76.4
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 7.8e-126 454.1 284 76.4
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 1.3e-125 453.4 284 76.4
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 1.7e-125 453.0 284 75.4
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 8.6e-125 450.7 296 73.6
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.9e-124 449.5 287 74.2
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 3.3e-124 448.7 287 74.6
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 9.5e-124 447.2 287 75.6
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 2.1e-123 446.0 281 74.0
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 2.8e-123 445.7 285 72.3
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 8.1e-123 444.1 273 76.6
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 1.4e-122 443.4 287 75.3
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 3.1e-122 442.2 285 73.0
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 4.0e-122 441.8 280 74.3
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 5.2e-122 441.4 270 77.8
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 3.4e-121 438.7 285 69.5
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 4.4e-121 438.3 286 71.7
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 4.4e-121 438.3 285 71.2
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 5.8e-121 438.0 292 72.3
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 2.2e-120 436.0 284 71.5
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 2.9e-120 435.6 286 73.4
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 6.4e-120 434.5 284 71.5
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 1.4e-119 433.3 283 71.7
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.4e-119 432.6 289 70.6
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 2.4e-119 432.6 285 69.8
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 2.4e-119 432.6 285 69.8
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 7.1e-119 431.0 307 68.4
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.6e-118 429.9 285 73.7
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.7e-118 429.1 289 70.2
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 7.8e-118 427.6 285 69.1
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.7e-117 426.4 286 69.2
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 3.9e-117 425.2 330 63.3
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 6.6e-117 424.5 286 69.2
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.5e-116 422.5 283 71.0
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 2.1e-115 419.5 285 68.4
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 8.1e-115 417.5 288 69.8
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 1.1e-114 417.2 285 66.7
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 2.4e-114 416.0 290 70.0
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 5.2e-114 414.8 277 70.8
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 8.9e-114 414.1 281 68.7
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 1.2e-113 413.7 285 66.7
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 8.4e-112 407.5 285 66.3
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 3.5e-110 402.1 285 65.6
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 6.0e-110 401.4 282 66.7
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 1.7e-109 399.8 270 69.3
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 6.6e-109 397.9 281 65.1
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 8.1e-107 391.0 252 74.2
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.2e-105 387.1 260 70.0
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 2.6e-105 386.0 266 68.0
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 2.5e-100 369.4 247 69.6
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 5.6e-100 368.2 279 61.6
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 9.0e-98 360.9 259 65.6
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 9.0e-98 360.9 281 63.0
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 1.5e-97 360.1 279 60.9
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.6e-91 340.1 240 68.3
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.8e-91 339.3 214 74.8
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 5.7e-84 315.1 272 55.1
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 1.6e-70 270.4 260 48.5
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 2.3e-69 266.5 177 73.4
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 3.3e-68 262.7 254 49.6
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 7.4e-68 261.5 253 50.6
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.7e-67 260.4 260 50.0
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.1e-47 194.5 153 64.1
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 9.4e-47 191.4 110 80.9
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 2.7e-46 189.9 254 40.9
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 9.8e-44 181.4 302 40.1
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 2.9e-40 169.9 195 47.2
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 1.6e-38 164.1 103 73.8
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 3.4e-36 156.4 144 57.6
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 3.8e-32 142.9 95 69.5
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 5.6e-31 139.0 87 72.4
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.2e-28 131.3 96 64.6
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.2e-28 131.3 77 77.9
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 6.8e-21 105.5 73 72.6
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 9.8e-20 101.7 68 73.5
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 2.7e-09 67.0 38 76.3
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 6.2e-06 55.8 48 60.4


User provided reference genes

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