Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g30596 Brassica carinata HOM05D001004 ORTHO05D000653 4.2e-22 107.1 52 100.0
BolC7t43147H Brassica oleracea HOM05D001004 ORTHO05D000653 4.8e-18 93.6 65 76.9
BraA06t27650Z Brassica rapa HOM05D001004 ORTHO05D000653 4.8e-18 93.6 65 76.9
BcaC06g31688 Brassica carinata HOM05D001004 ORTHO05D000653 1.4e-17 92.0 65 73.8
A06p47800 Brassica napus HOM05D001004 ORTHO05D000653 2.4e-17 91.3 65 75.4
Thhalv10003303m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 3.5e-16 87.4 65 72.3
Sp2g08400 Schrenkiella parvula HOM05D001004 ORTHO05D000653 6.5e-15 83.2 65 69.2
CARHR180030 Cardamine hirsuta HOM05D001004 ORTHO05D000653 1.1e-14 82.4 65 64.6
Carub.0008s0507 Capsella rubella HOM05D001004 ORTHO05D000653 7.2e-14 79.7 65 67.7
AL8G16730 Arabidopsis lyrata HOM05D001004 ORTHO05D000653 1.2e-13 79.0 65 64.6
Carub.0008s0504 Capsella rubella HOM05D001004 ORTHO05D000653 2.7e-13 77.8 63 65.1
AT5G43570 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 1.0e-12 75.9 61 63.9
THA.LOC104805628 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 2.2e-10 68.2 64 56.2
CARHR180010 Cardamine hirsuta HOM05D001004 ORTHO05D000653 2.8e-10 67.8 65 60.0
Gorai.009G312600 Gossypium raimondii HOM05D001004 ORTHO05D000653 2.4e-09 64.7 64 57.8
BcaC06g34643 Brassica carinata HOM05D001004 ORTHO05D000653 7.0e-09 63.2 50 70.0
AT5G43580 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 2.0e-08 61.6 64 48.4
Aa31LG5G3620 Aethionema arabicum HOM05D001004 ORTHO05D000653 2.7e-08 61.2 64 50.0
Hma1.2p1_0310F.1_g120850 Hydrangea macrophylla HOM05D001004 ORTHO05D000653 3.5e-08 60.8 64 53.1
Sp2g08390 Schrenkiella parvula HOM05D001004 ORTHO05D000653 5.9e-08 60.1 64 48.4
Carub.0008s0506 Capsella rubella HOM05D001004 ORTHO05D000653 1.1e-06 55.8 64 46.9
Thhalv10003342m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 3.2e-06 54.3 65 46.2
Thhalv10003305m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 4.2e-06 53.9 64 45.3
Carub.0008s0505 Capsella rubella HOM05D001004 ORTHO05D000653 5.5e-06 53.5 64 46.9


User provided reference genes

Program Settings