Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g30443 Brassica carinata HOM05D000857 ORTHO05D092258 3.5e-74 281.6 146 100.0
BcaB08g37003 Brassica carinata HOM05D000857 ORTHO05D001382 1.2e-10 70.5 36 94.4
BraA10t44603Z Brassica rapa HOM05D000857 ORTHO05D001382 1.0e-09 67.4 80 51.2
A10p25390 Brassica napus HOM05D000857 ORTHO05D001382 1.8e-09 66.6 80 51.2
C09p64450 Brassica napus HOM05D000857 ORTHO05D001382 1.8e-09 66.6 80 51.2
BolC9t59280H Brassica oleracea HOM05D000857 ORTHO05D001382 1.8e-09 66.6 80 51.2
AL6G23260 Arabidopsis lyrata HOM05D000857 ORTHO05D001382 3.3e-08 62.4 36 83.3
Thhalv10012926m.g Eutrema salsugineum HOM05D000857 ORTHO05D001382 3.3e-08 62.4 37 81.1
BcaC05g29823 Brassica carinata HOM05D000639 ORTHO05D004019 4.4e-08 62.0 42 73.8
A05p41240 Brassica napus HOM05D000639 ORTHO05D004019 4.4e-08 62.0 42 73.8
C03p06580 Brassica napus HOM05D000857 ORTHO05D001382 4.4e-08 62.0 36 83.3
BolC5t34700H Brassica oleracea HOM05D000639 ORTHO05D004019 4.4e-08 62.0 42 73.8
BolC3t13164H Brassica oleracea HOM05D000857 ORTHO05D001382 5.7e-08 61.6 36 83.3
AT5G12440 Arabidopsis thaliana HOM05D000857 ORTHO05D001382 7.5e-08 61.2 36 83.3
BraA05t22847Z Brassica rapa HOM05D000639 ORTHO05D004019 7.5e-08 61.2 30 93.3
Carub.0006s1095 Capsella rubella HOM05D000857 ORTHO05D001382 9.7e-08 60.8 51 64.7
CARHR200660 Cardamine hirsuta HOM05D000857 ORTHO05D001382 1.7e-07 60.1 36 80.6
Sp6g31190 Schrenkiella parvula HOM05D000857 ORTHO05D001382 2.2e-07 59.7 37 81.1
Aa31LG3G14800 Aethionema arabicum HOM05D000857 ORTHO05D001382 2.8e-07 59.3 38 81.6
AL3G18100 Arabidopsis lyrata HOM05D000639 ORTHO05D004019 2.8e-07 59.3 30 90.0
C05p60460 Brassica napus HOM05D000639 ORTHO05D004019 2.8e-07 59.3 71 54.9
BcaC05g29770 Brassica carinata HOM05D000639 ORTHO05D004019 4.8e-07 58.5 68 54.4
Sp3g05880 Schrenkiella parvula HOM05D000639 ORTHO05D004019 1.4e-06 57.0 68 52.9
CARHR081540 Cardamine hirsuta HOM05D000639 ORTHO05D004019 1.8e-06 56.6 30 83.3
Thhalv10020486m.g Eutrema salsugineum HOM05D000639 ORTHO05D004019 3.1e-06 55.8 68 54.4
AT3G06930 Arabidopsis thaliana HOM05D000639 ORTHO05D004019 5.3e-06 55.1 30 86.7


User provided reference genes

Program Settings