Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g30317 Brassica carinata HOM05D005127 ORTHO05D006022 2.7e-205 718.4 353 100.0
BcaC05g30528 Brassica carinata HOM05D005127 ORTHO05D006022 1.5e-192 676.0 365 91.5
BolC5t35029H Brassica oleracea HOM05D005127 ORTHO05D006022 3.4e-192 674.9 365 91.5
C05p63600 Brassica napus HOM05D005127 ORTHO05D006022 7.7e-192 673.7 365 91.2
A05p43980 Brassica napus HOM05D005127 ORTHO05D006022 9.4e-190 666.8 366 90.2
BraSC90t46712Z Brassica rapa HOM05D005127 ORTHO05D006022 3.6e-189 664.8 369 89.2
Sp3g02250 Schrenkiella parvula HOM05D005127 ORTHO05D006022 1.4e-185 652.9 368 88.0
Carub.0003s0236 Capsella rubella HOM05D005127 ORTHO05D006022 1.2e-184 649.8 369 87.0
CARHR077230 Cardamine hirsuta HOM05D005127 ORTHO05D006022 1.2e-181 639.8 368 85.6
AL3G12820 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 2.7e-181 638.6 369 85.9
AT3G03210 Arabidopsis thaliana HOM05D005127 ORTHO05D006022 3.6e-181 638.3 369 85.4
Thhalv10020974m.g Eutrema salsugineum HOM05D005127 ORTHO05D006022 2.6e-179 632.1 369 85.1
Aa31LG5G13690 Aethionema arabicum HOM05D005127 ORTHO05D006022 7.2e-174 614.0 370 81.4
THA.LOC104827223 Tarenaya hassleriana HOM05D005127 ORTHO05D006022 8.3e-154 547.4 366 75.7
Cpa.g.sc178.24 Carica papaya HOM05D005127 ORTHO05D006022 3.0e-151 538.9 370 71.6
Ciclev10012019m.g Citrus clementina HOM05D005127 ORTHO05D006022 3.1e-140 502.3 369 66.1
Thecc.04G065100 Theobroma cacao HOM05D005127 ORTHO05D006022 4.4e-139 498.4 365 65.2
COL.COLO4_19768 Corchorus olitorius HOM05D005127 ORTHO05D006022 5.8e-139 498.0 372 63.7
Atru.chr1.2154 Acer truncatum HOM05D005127 ORTHO05D006022 2.7e-136 489.2 361 66.8
Manes.10G079000 Manihot esculenta HOM05D005127 ORTHO05D006022 3.0e-135 485.7 375 63.2
Gohir.A07G074000 Gossypium hirsutum HOM05D005127 ORTHO05D006022 2.5e-134 482.6 373 63.3
Gorai.001G083200 Gossypium raimondii HOM05D005127 ORTHO05D006022 2.5e-134 482.6 373 63.5
Gorai.002G111000 Gossypium raimondii HOM05D005127 ORTHO05D006022 2.5e-134 482.6 367 63.5
Gohir.D07G078700 Gossypium hirsutum HOM05D005127 ORTHO05D006022 4.3e-134 481.9 373 63.3
Gohir.D01G085400 Gossypium hirsutum HOM05D005127 ORTHO05D006022 2.1e-133 479.6 367 62.9
Duzib138G1903 Durio zibethinus HOM05D005127 ORTHO05D006022 3.6e-133 478.8 370 63.0
TWI74G1018 Tripterygium wilfordii HOM05D005127 ORTHO05D006022 4.7e-133 478.4 370 64.1
Gohir.A01G100900 Gossypium hirsutum HOM05D005127 ORTHO05D006022 1.1e-132 477.2 367 63.2
Potri.017G139800 Populus trichocarpa HOM05D005127 ORTHO05D006022 1.6e-128 463.4 366 62.6
MELO3C020241.2 Cucumis melo HOM05D005127 ORTHO05D006022 2.1e-128 463.0 367 60.5
CsaV3_3G021100 Cucumis sativus L. HOM05D005127 ORTHO05D006022 4.6e-128 461.8 367 61.0
Sabra17G0118000 Salix brachista HOM05D005127 ORTHO05D006022 7.8e-128 461.1 366 61.5
Potri.004G080600 Populus trichocarpa HOM05D005127 ORTHO05D006022 5.1e-127 458.4 370 62.2
Sabra04G0053400 Salix brachista HOM05D005127 ORTHO05D006022 1.9e-126 456.4 370 62.4
ClCG05G011360 Citrullus lanatus HOM05D005127 ORTHO05D006022 2.5e-126 456.1 367 59.7
CiPaw.03G076300 Carya illinoinensis HOM05D005127 ORTHO05D006022 4.3e-126 455.3 362 61.6
Sed0023234 Sechium edule HOM05D005127 ORTHO05D006022 5.6e-126 454.9 367 60.8
Prupe.3G014700 Prunus persica HOM05D005127 ORTHO05D006022 2.1e-125 453.0 372 61.3
MD09G1279600 Malus domestica HOM05D005127 ORTHO05D006022 1.5e-123 446.8 372 59.9
Haze_14318 Corylus avellana HOM05D005127 ORTHO05D006022 3.4e-123 445.7 360 61.4
TAR371G0217 Trochodendron aralioides HOM05D005127 ORTHO05D006022 1.7e-122 443.4 366 60.7
Cfa007754 Carpinus fangiana HOM05D005127 ORTHO05D006022 2.2e-122 443.0 360 60.8
VMungo0647G1176 Vigna mungo HOM05D005127 ORTHO05D006022 6.4e-122 441.4 367 62.4
CSS0034699 Camellia sinensis var. sinensis HOM05D005127 ORTHO05D006022 8.4e-122 441.0 363 61.2
Glyma.14G210400 Glycine max HOM05D005127 ORTHO05D006022 1.4e-121 440.3 373 60.9
CANSAT21G1480 Cannabis sativa HOM05D005127 ORTHO05D006022 1.0e-119 434.1 361 60.1
Phvul.008G240900 Phaseolus vulgaris HOM05D005127 ORTHO05D006022 1.0e-119 434.1 367 61.6
Glyma.02G240800 Glycine max HOM05D005127 ORTHO05D006022 1.7e-119 433.3 377 59.7
Aqoxy3G04119 Aquilegia oxysepala HOM05D005127 ORTHO05D006022 5.1e-119 431.8 364 58.0
PGR042G2448 Punica granatum HOM05D005127 ORTHO05D006022 7.3e-118 427.9 374 59.1
Lalb_Chr10g0104061 Lupinus albus HOM05D005127 ORTHO05D006022 9.6e-118 427.6 372 58.6
QL02p064340 Quercus lobata HOM05D005127 ORTHO05D006022 1.6e-117 426.8 351 59.8
RcHm_v2.0_Chr3g0488741 Rosa chinensis HOM05D005127 ORTHO05D006022 6.2e-117 424.9 361 58.4
Rhsim08G0021200 Rhododendron simsii HOM05D005127 ORTHO05D006022 6.9e-116 421.4 371 59.6
Hma1.2p1_0158F.1_g069660 Hydrangea macrophylla HOM05D005127 ORTHO05D006022 3.4e-115 419.1 367 57.2
Psat2g042880 Pisum sativum HOM05D005127 ORTHO05D006022 1.7e-114 416.8 375 57.1
FAN23G3138 Fragaria x ananassa HOM05D005127 ORTHO05D006022 2.2e-114 416.4 363 58.1
Gorai.007G188500 Gossypium raimondii HOM05D005127 ORTHO05D006022 2.2e-114 416.4 362 56.1
Eucgr.H04888 Eucalyptus grandis HOM05D005127 ORTHO05D006022 4.9e-114 415.2 379 57.5
Lalb_Chr17g0345881 Lupinus albus HOM05D005127 ORTHO05D006022 4.9e-114 415.2 373 56.8
FvH4_1g27360 Fragaria vesca HOM05D005127 ORTHO05D006022 6.4e-114 414.8 363 57.9
FAN28G1653 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.1e-113 414.1 363 57.9
FAN28G2393 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.1e-113 414.1 363 57.9
FAN19G2113 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.4e-113 413.7 363 57.6
PSO724G0684 Papaver somniferum HOM05D005127 ORTHO05D006022 1.4e-113 413.7 372 55.9
Ca_05761_v3 Cicer arietinum L. HOM05D005127 ORTHO05D006022 1.9e-113 413.3 379 57.3
MBI06_g13889_MAGBIO Magnolia biondii HOM05D005127 ORTHO05D006022 4.2e-113 412.1 366 56.8
PSO729G0281 Papaver somniferum HOM05D005127 ORTHO05D006022 7.1e-113 411.4 372 55.4
Sc09g0004500 Simmondsia chinensis HOM05D005127 ORTHO05D006022 3.0e-111 406.0 363 57.3
TPR.G5353 Trifolium pratense HOM05D005127 ORTHO05D006022 3.0e-111 406.0 385 55.3
ATR0807G162 Amborella trichopoda HOM05D005127 ORTHO05D006022 8.7e-111 404.4 365 55.1
Medtr5g076930 Medicago truncatula HOM05D005127 ORTHO05D006022 8.7e-111 404.4 373 55.5
Actinidia35707 Actinidia chinensis HOM05D005127 ORTHO05D006022 1.9e-110 403.3 361 58.2
FAN26G1075 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.9e-110 403.3 362 56.4
Gohir.A11G169700 Gossypium hirsutum HOM05D005127 ORTHO05D006022 2.5e-110 402.9 348 55.7
Sopen03g005720 Solanum pennellii HOM05D005127 ORTHO05D006022 4.0e-108 395.6 366 55.7
Gohir.D11G175900 Gossypium hirsutum HOM05D005127 ORTHO05D006022 1.5e-107 393.7 350 56.3
LjContig00141g0000865 Lotus japonicus HOM05D005127 ORTHO05D006022 1.5e-107 393.7 366 56.6
Solyc03g031850.1 Solanum lycopersicum HOM05D005127 ORTHO05D006022 1.5e-107 393.7 366 55.5
Peaxi162Scf00521g00053 Petunia axillaris HOM05D005127 ORTHO05D006022 4.5e-107 392.1 363 55.4
GSVIVG01035235001 Vitis vinifera HOM05D005127 ORTHO05D006022 9.9e-107 391.0 358 57.8
Cc07_g12800 Coffea canephora HOM05D005127 ORTHO05D006022 1.7e-106 390.2 366 54.9
PGSC0003DMG400042292 Solanum tuberosum HOM05D005127 ORTHO05D006022 1.7e-106 390.2 370 54.6
CAN.G404.4 Capsicum annuum HOM05D005127 ORTHO05D006022 2.2e-106 389.8 365 55.3
PGSC0003DMG400016729 Solanum tuberosum HOM05D005127 ORTHO05D006022 2.9e-106 389.4 370 53.5
Sopen02g025870 Solanum pennellii HOM05D005127 ORTHO05D006022 3.8e-106 389.0 376 54.0
MSTRG.15431 Avicennia marina HOM05D005127 ORTHO05D006022 1.4e-105 387.1 368 54.9
Dinv19078 Davidia involucrata HOM05D005127 ORTHO05D006022 1.9e-105 386.7 360 56.4
Migut.H02248 Erythranthe guttata HOM05D005127 ORTHO05D006022 7.1e-105 384.8 364 54.1
HanXRQChr14g0443471 Helianthus annuus HOM05D005127 ORTHO05D006022 2.1e-104 383.3 358 54.7
Oeu012525.1 Olea europaea HOM05D005127 ORTHO05D006022 2.1e-104 383.3 384 53.6
Nitab4.5_0000091g0380 Nicotiana tabacum HOM05D005127 ORTHO05D006022 2.7e-104 382.9 375 54.1
SGA_v2.0_scaffold135G34932 Striga asiatica HOM05D005127 ORTHO05D006022 2.7e-104 382.9 369 52.8
Nitab4.5_0007410g0020 Nicotiana tabacum HOM05D005127 ORTHO05D006022 3.5e-104 382.5 367 54.5
Nitab4.5_0004645g0030 Nicotiana tabacum HOM05D005127 ORTHO05D006022 4.6e-104 382.1 376 53.7
AUR62037482 Chenopodium quinoa HOM05D005127 ORTHO05D009825 8.7e-103 377.9 359 56.3
Lj4P252T15 Lonicera japonica HOM05D005127 ORTHO05D006022 1.9e-102 376.7 345 55.4
Lsat_1_v5_gn_2_71721 Lactuca sativa HOM05D005127 ORTHO05D006022 5.6e-102 375.2 344 54.9
CAN.G1681.7 Capsicum annuum HOM05D005127 ORTHO05D006022 1.8e-100 370.2 361 52.1
Nitab4.5_0010422g0010 Nicotiana tabacum HOM05D005127 ORTHO05D006022 1.8e-100 370.2 364 52.5
SHI30090 Sapria himalayana HOM05D005127 ORTHO05D006022 2.9e-98 362.8 368 50.8
Oeu039702.1 Olea europaea HOM05D005127 ORTHO05D006022 5.5e-97 358.6 379 49.1
DCAR_003746 Daucus carota HOM05D005127 ORTHO05D006022 4.5e-91 339.0 356 48.0
SalBow3G2114 Salvia bowleyana HOM05D005127 ORTHO05D006022 1.0e-90 337.8 330 53.6
SalBow3G1912 Salvia bowleyana HOM05D005127 ORTHO05D006022 1.3e-90 337.4 330 53.9
Zm00001eb393730 Zea mays HOM05D005127 ORTHO05D006022 4.5e-83 312.4 366 46.4
SEGI_34462 Sequoiadendron giganteum HOM05D005127 ORTHO05D006022 5.9e-83 312.0 455 40.0
Os10g0539400 Oryza sativa ssp. japonica HOM05D005127 ORTHO05D006022 1.0e-79 301.2 365 44.9
ECA238G3642 Erigeron canadensis HOM05D005127 ORTHO05D006022 5.7e-78 295.4 287 53.3
Mapoly0003s0310 Marchantia polymorpha HOM05D005127 ORTHO05D006022 8.2e-77 291.6 378 42.1
CDE01G0221 Ceratophyllum demersum HOM05D005127 ORTHO05D006022 1.0e-74 284.6 292 48.3
Zm00001eb022160 Zea mays HOM05D005127 ORTHO05D006022 2.5e-73 280.0 347 44.4
Migut.H02247 Erythranthe guttata HOM05D005127 ORTHO05D006022 1.8e-71 273.9 334 41.3
CDE02G3442 Ceratophyllum demersum HOM05D005127 ORTHO05D006022 2.3e-71 273.5 362 41.7
Oeu045801.1 Olea europaea HOM05D005127 ORTHO05D006022 2.6e-70 270.0 329 42.9
SMO141G0134 Selaginella moellendorffii HOM05D005127 ORTHO05D006022 1.6e-64 250.8 359 39.0
Pp3c8_14800 Physcomitrium patens HOM05D005127 ORTHO05D006022 9.1e-60 235.0 360 37.2
unitig_699.g19573 Utricularia gibba HOM05D005127 ORTHO05D006022 3.6e-56 223.0 231 54.5
AUR62004769 Chenopodium quinoa HOM05D005127 ORTHO05D006022 2.2e-53 213.8 198 53.0
HPP92_020636 Vanilla planifolia HOM05D005127 ORTHO05D006022 8.3e-53 211.8 198 49.0
Solyc02g081230.4 Solanum lycopersicum HOM05D005127 ORTHO05D006022 2.7e-51 206.8 182 54.4
AagrBONN_evm.TU.Sc2ySwM_228.805 Anthoceros agrestis HOM05D005127 ORTHO05D006022 9.5e-49 198.4 273 38.8
AagrBONN_evm.TU.Sc2ySwM_117.2318 Anthoceros agrestis HOM05D005127 ORTHO05D006022 5.4e-44 182.6 238 40.3
PSO063G7663 Papaver somniferum HOM05D005127 ORTHO05D006022 1.6e-40 171.0 175 53.7
Gorai.004G162300 Gossypium raimondii HOM05D005127 ORTHO05D006022 1.8e-36 157.5 128 57.8
Lsat_1_v5_gn_2_6720 Lactuca sativa HOM05D005127 ORTHO05D006022 5.4e-36 156.0 157 49.0
Gorai.009G350000 Gossypium raimondii HOM05D000154 ORTHO05D006022 9.2e-36 155.2 128 56.2
CBR_g39794 Chara braunii HOM05D005127 ORTHO05D006022 7.8e-35 152.1 283 30.7
Gorai.005G117100 Gossypium raimondii HOM05D005127 ORTHO05D006022 1.9e-33 147.5 128 56.2
Lsat_1_v5_gn_5_127001 Lactuca sativa HOM05D005127 ORTHO05D006022 4.3e-33 146.4 140 50.7
AL3G25840 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 1.1e-28 131.7 95 71.6
AL8G37650 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 1.1e-28 131.7 95 71.6
Medtr5g076940 Medicago truncatula HOM05D005127 ORTHO05D006022 4.6e-27 126.3 108 56.5
Gohir.D05G325801 Gossypium hirsutum HOM05D000154 ORTHO05D006022 2.8e-24 117.1 91 57.1
Gorai.011G105200 Gossypium raimondii HOM05D000154 ORTHO05D006022 1.8e-23 114.4 88 58.0
Gohir.D08G156000 Gossypium hirsutum HOM05D005127 ORTHO05D006022 2.3e-23 114.0 91 56.0
Gorai.002G056700 Gossypium raimondii HOM05D005127 ORTHO05D006022 2.2e-21 107.5 91 52.7
MCO15G483 Micromonas commoda HOM05D005127 ORTHO05D006022 6.4e-21 105.9 295 25.4
RcHm_v2.0_Chr5g0027411 Rosa chinensis HOM05D005127 ORTHO05D006022 1.4e-20 104.8 226 34.1
Gohir.D04G098033 Gossypium hirsutum HOM05D005127 ORTHO05D006022 1.9e-20 104.4 96 52.1
A09p28600 Brassica napus HOM05D005127 ORTHO05D006022 7.1e-20 102.4 58 87.9
RcHm_v2.0_Chr4g0398381 Rosa chinensis HOM05D005127 ORTHO05D006022 1.3e-18 98.2 92 57.6
RcHm_v2.0_Chr5g0042551 Rosa chinensis HOM05D005127 ORTHO05D006022 1.3e-18 98.2 109 42.2
Gohir.D02G103100 Gossypium hirsutum HOM05D000154 ORTHO05D006022 1.2e-14 85.1 68 54.4
GSVIVG01034874001 Vitis vinifera HOM05D005127 ORTHO05D006022 1.9e-12 77.8 77 54.5
GSVIVG01000363001 Vitis vinifera HOM05D005127 ORTHO05D006022 9.2e-12 75.5 65 58.5
Dinv28241 Davidia involucrata HOM05D005127 ORTHO05D006022 1.2e-11 75.1 100 48.0
Nn2g14442 Nelumbo nucifera HOM05D005127 ORTHO05D006022 3.5e-11 73.6 45 82.2
GSVIVG01038053001 Vitis vinifera HOM05D005127 ORTHO05D006022 3.5e-11 73.6 59 61.0
vmacro09980 Vaccinium macrocarpon HOM05D000060 ORTHO05D003150 1.8e-07 61.2 76 46.1


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