Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1421.8 719 100.0
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1296.2 720 91.2
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1295.0 720 91.7
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1290.8 724 90.6
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1281.5 720 90.7
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 0.0e+00 1279.6 723 89.6
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 0.0e+00 1279.2 721 89.7
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1275.0 724 89.6
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 0.0e+00 1263.4 723 87.7
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1259.6 722 88.9
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1252.7 723 89.5
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1245.7 725 88.1
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 0.0e+00 1245.7 725 88.1
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 0.0e+00 1231.1 722 86.8
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 0.0e+00 1229.2 731 86.9
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 0.0e+00 1224.9 723 85.6
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 0.0e+00 1223.8 722 85.7
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 0.0e+00 1189.1 717 86.2
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 0.0e+00 1163.7 743 80.9
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 0.0e+00 1077.4 728 74.5
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 3.0e-275 951.8 542 88.0
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 1.8e-272 942.6 746 64.7
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 6.9e-272 940.6 746 65.1
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 9.0e-272 940.3 746 65.0
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 3.8e-270 934.9 747 64.8
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 3.5e-268 928.3 743 63.8
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 3.6e-265 918.3 744 64.0
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 1.8e-264 916.0 747 63.3
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 6.9e-264 914.1 746 63.7
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 1.3e-262 909.8 746 62.5
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 1.9e-261 906.0 747 62.4
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 1.2e-260 903.3 747 62.7
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 5.1e-259 897.9 747 62.0
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 7.4e-258 894.0 743 62.9
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 4.8e-257 891.3 759 61.5
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 5.3e-256 887.9 749 61.4
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 2.6e-255 885.6 747 61.3
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 9.9e-255 883.6 743 61.1
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 1.3e-254 883.2 744 61.8
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 3.8e-254 881.7 660 67.3
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 3.5e-252 875.2 739 61.0
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 1.3e-251 873.2 746 59.7
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 1.3e-251 873.2 741 60.7
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 3.9e-251 871.7 735 59.7
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 2.1e-249 865.9 747 60.9
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 1.1e-248 863.6 736 59.8
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 1.8e-248 862.8 739 60.5
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 3.1e-248 862.1 742 59.0
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 5.3e-248 861.3 753 59.0
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 9.0e-248 860.5 739 60.5
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 1.5e-247 859.8 747 59.0
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 1.5e-247 859.8 742 61.1
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 3.4e-247 858.6 742 61.2
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 1.0e-246 857.1 724 61.9
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 1.9e-245 852.8 734 59.7
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 2.1e-244 849.4 742 60.4
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 3.5e-244 848.6 739 58.9
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 3.5e-244 848.6 776 56.6
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 1.3e-243 846.7 742 59.8
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 3.0e-243 845.5 747 58.1
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 3.9e-243 845.1 767 59.1
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 1.1e-242 843.6 742 58.1
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 9.7e-242 840.5 729 59.5
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 8.2e-241 837.4 747 57.8
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 5.3e-240 834.7 832 55.9
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 6.9e-240 834.3 745 58.9
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 4.5e-239 831.6 748 58.8
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 1.0e-238 830.5 732 59.2
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 2.9e-238 828.9 606 68.6
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 3.2e-237 825.5 742 58.0
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 1.2e-236 823.5 747 58.0
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 2.7e-236 822.4 772 55.8
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 2.7e-236 822.4 771 58.0
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 2.3e-235 819.3 770 55.6
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 1.1e-234 817.0 745 57.6
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 3.3e-234 815.5 773 55.6
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 1.8e-232 809.7 758 56.6
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 2.4e-232 809.3 733 58.5
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 1.7e-230 803.1 677 61.9
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 5.0e-230 801.6 761 57.2
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 1.4e-229 800.0 704 60.9
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 7.9e-228 794.3 771 55.8
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 3.0e-227 792.3 801 53.8
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 2.0e-226 789.6 744 56.2
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 2.6e-226 789.3 669 61.9
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 2.8e-225 785.8 824 53.2
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 4.8e-225 785.0 671 61.5
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 5.9e-223 778.1 740 56.8
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 2.1e-220 769.6 662 61.2
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 8.5e-214 747.7 693 57.7
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 1.5e-213 746.9 671 56.8
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 1.8e-211 740.0 739 54.4
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 1.3e-206 723.8 763 52.6
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 9.4e-205 717.6 752 53.1
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 6.1e-204 714.9 659 56.8
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 5.2e-203 711.8 652 57.1
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 8.3e-201 704.5 809 49.3
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 1.2e-199 700.7 571 65.1
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 5.9e-199 698.4 746 51.7
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 3.7e-193 679.1 738 50.7
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 4.9e-193 678.7 745 51.0
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 8.6e-190 667.9 749 50.9
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 1.1e-189 667.5 728 51.2
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 1.9e-176 623.6 621 54.9
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 3.9e-174 615.9 746 47.7
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 2.5e-173 613.2 625 53.3
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 7.6e-170 601.7 779 46.3
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 7.6e-170 601.7 740 47.4
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 1.8e-163 580.5 736 46.9
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 1.5e-162 577.4 631 51.2
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 7.1e-160 568.5 927 40.3
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 8.7e-158 561.6 609 51.4
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 9.0e-155 551.6 609 50.2
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 2.9e-153 546.6 539 54.0
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 1.5e-141 507.7 644 48.1
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 1.7e-129 467.6 528 48.7
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.7e-129 467.6 393 61.3
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 2.3e-110 404.1 394 52.5
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 6.5e-89 332.8 613 35.6
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 9.4e-88 328.9 336 53.0
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 3.6e-79 300.4 540 37.2
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 3.7e-76 290.4 702 31.1
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.5e-56 225.3 378 37.6
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.3e-52 212.2 228 49.1
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.3e-52 212.2 228 49.1
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 1.2e-50 205.7 576 30.6
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 4.3e-48 197.2 161 64.0
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 1.0e-41 176.0 102 88.2
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.1e-40 172.6 146 58.9
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 1.3e-36 159.1 162 50.6
FAN05G3606 Fragaria x ananassa HOM05D005077 ORTHO05D019498 1.2e-34 152.5 183 43.7
Lalb_Chr22g0358851 Lupinus albus HOM05D005077 ORTHO05D006889 2.3e-33 148.3 77 89.6
QL07p018546 Quercus lobata HOM05D005077 ORTHO05D006889 3.9e-33 147.5 77 88.3
Cc02_g08780 Coffea canephora HOM05D005077 ORTHO05D006889 6.2e-31 140.2 77 84.4
C08p13010 Brassica napus HOM05D005077 ORTHO05D006889 7.4e-24 116.7 56 100.0
arahy.Tifrunner.gnm1.ann1.TVQ2CS Arachis hypogaea HOM05D005077 ORTHO05D006889 3.2e-19 101.3 173 39.3
BcaC05g29940 Brassica carinata HOM05D005077 ORTHO05D018175 3.2e-19 101.3 191 42.9
PGSC0003DMG400019116 Solanum tuberosum HOM05D005077 ORTHO05D018175 2.5e-16 91.7 100 46.0
C05p29450 Brassica napus HOM05D005077 ORTHO05D018175 6.3e-15 87.0 66 77.3
BolC5t31675H Brassica oleracea HOM05D005077 ORTHO05D018175 6.3e-15 87.0 66 77.3
EL10Ac5g11645 Beta vulgaris HOM05D005077 ORTHO05D006889 1.4e-14 85.9 50 76.0
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 3.1e-14 84.7 62 59.7
CSS0009313 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 6.5e-12 77.0 78 48.7
Atru.chr2.994 Acer truncatum HOM05D005077 ORTHO05D018175 1.1e-08 66.2 93 45.2
Hund05190 Selenicereus undatus HOM05D005077 ORTHO05D006889 3.3e-08 64.7 56 57.1
CSS0021399 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 2.4e-06 58.5 63 49.2
CSS0037989 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 6.9e-06 57.0 63 49.2


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