Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g30090 Brassica carinata HOM05D015039 ORTHO05D011322 1.3e-216 756.1 405 100.0
C03p83110 Brassica napus HOM05D015039 ORTHO05D011322 1.1e-173 613.6 424 84.0
C06p03870 Brassica napus HOM05D015039 ORTHO05D000276 1.4e-173 613.2 424 83.7
BcaC08g43114 Brassica carinata HOM05D015039 ORTHO05D011322 1.8e-173 612.8 439 81.3
BolC5t28809H Brassica oleracea HOM05D015039 ORTHO05D011322 7.3e-170 600.9 417 83.9
A08p33950 Brassica napus HOM05D015039 ORTHO05D011322 3.6e-129 465.7 367 73.3
BcaC02g10267 Brassica carinata HOM05D015039 ORTHO05D011322 2.2e-118 429.9 321 79.4
A04p33690 Brassica napus HOM05D015039 ORTHO05D011322 6.1e-84 315.5 239 75.7
A05p43920 Brassica napus HOM05D015039 ORTHO05D011322 1.3e-38 164.9 144 68.8
A03p13580 Brassica napus HOM05D012600 ORTHO05D039409 2.5e-37 160.6 383 39.9
BNapus_Darmor_BZH_scaffold_38p02020 Brassica napus HOM05D008872 ORTHO05D011322 1.5e-34 151.4 162 59.3
BolC2t06990H Brassica oleracea HOM05D008872 ORTHO05D011322 1.5e-34 151.4 162 59.3
BcaC04g22210 Brassica carinata HOM05D008872 ORTHO05D011322 3.9e-30 136.7 111 68.5
C08p52410 Brassica napus HOM05D008872 ORTHO05D011322 6.6e-30 136.0 155 52.9
BcaC06g34166 Brassica carinata HOM05D008872 ORTHO05D039385 1.6e-28 131.3 158 50.6
BolC7t43612H Brassica oleracea HOM05D008872 ORTHO05D011322 8.1e-28 129.0 155 51.0
C05p01530 Brassica napus HOM05D008872 ORTHO05D011322 1.2e-26 125.2 112 66.1
BcaC02g07321 Brassica carinata HOM05D008872 ORTHO05D011322 1.5e-26 124.8 116 63.8
BcaB04g20432 Brassica carinata HOM05D008872 ORTHO05D011322 3.2e-24 117.1 102 65.7
BolC3t19826H Brassica oleracea HOM05D008872 ORTHO05D032322 4.2e-24 116.7 133 53.4
C09p62250 Brassica napus HOM05D008872 ORTHO05D011322 5.4e-24 116.3 133 52.6
C02p46890 Brassica napus HOM05D008872 ORTHO05D032322 7.1e-24 115.9 133 52.6
A07p34770 Brassica napus HOM05D008872 ORTHO05D011322 9.2e-24 115.5 171 47.4
C03p17890 Brassica napus HOM05D008872 ORTHO05D011322 1.2e-23 115.2 167 47.3
C09p54490 Brassica napus HOM05D008872 ORTHO05D011322 3.5e-23 113.6 101 65.3
C06p02220 Brassica napus HOM05D008872 ORTHO05D011322 4.6e-23 113.2 133 51.9
C05p17110 Brassica napus HOM05D008872 ORTHO05D011322 7.8e-23 112.5 112 58.9
BcaC01g05406 Brassica carinata HOM05D008872 ORTHO05D011322 1.3e-22 111.7 142 48.6
BcaNung02292 Brassica carinata HOM05D000025 ORTHO05D000040 1.3e-22 111.7 133 52.6
BcaC03g17687 Brassica carinata HOM05D034399 ORTHO05D031762 7.6e-18 95.9 183 42.6
C02p56960 Brassica napus HOM05D034399 ORTHO05D031762 7.6e-18 95.9 183 42.6
BolC2t11764H Brassica oleracea HOM05D034399 ORTHO05D031762 7.6e-18 95.9 183 42.6
BcaC01g00092 Brassica carinata HOM05D008872 ORTHO05D032322 1.6e-15 88.2 123 47.2
C07p42690 Brassica napus HOM05D008872 ORTHO05D011322 1.3e-14 85.1 88 59.1
BraA09t38766Z Brassica rapa HOM05D012600 ORTHO05D024069 4.3e-13 80.1 80 61.2
BolC3t13168H Brassica oleracea HOM05D012600 ORTHO05D024069 1.4e-11 75.1 74 62.2
A09p32210 Brassica napus HOM05D012600 ORTHO05D024069 1.8e-11 74.7 74 62.2
BcaC08g46330 Brassica carinata HOM05D012600 ORTHO05D039409 6.9e-11 72.8 81 59.3
BNapus_Darmor_BZH_scaffold_229p00090 Brassica napus HOM05D008872 ORTHO05D011322 1.4e-08 65.1 135 39.3
C07p31980 Brassica napus HOM05D008872 ORTHO05D039385 9.3e-08 62.4 100 38.0
BcaC08g44779 Brassica carinata HOM05D008872 ORTHO05D032631 6.0e-07 59.7 88 46.6
BolC6t37523H Brassica oleracea HOM05D008872 ORTHO05D032631 7.9e-07 59.3 88 46.6
BcaB03g16517 Brassica carinata HOM05D009579 ORTHO05D014125 1.0e-06 58.9 144 35.4
BolC7t41296H Brassica oleracea HOM05D009579 ORTHO05D021934 1.8e-06 58.2 108 38.9
BcaC08g45935 Brassica carinata HOM05D008872 ORTHO05D039599 2.3e-06 57.8 66 51.5
C06p37330 Brassica napus HOM05D008872 ORTHO05D039599 2.3e-06 57.8 66 51.5
BcaC03g16816 Brassica carinata HOM05D008872 ORTHO05D011322 3.0e-06 57.4 139 37.4
C04p37990 Brassica napus HOM05D009579 ORTHO05D014125 3.0e-06 57.4 159 30.8
BcaC02g09063 Brassica carinata HOM05D009579 ORTHO05D014125 3.9e-06 57.0 152 33.6
BolC4t25373H Brassica oleracea HOM05D009579 ORTHO05D014125 3.9e-06 57.0 152 33.6
C07p08830 Brassica napus HOM05D009579 ORTHO05D021934 6.7e-06 56.2 108 38.0


User provided reference genes

Program Settings