Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g29912 Brassica carinata HOM05D008965 ORTHO05D011533 4.5e-42 174.1 84 100.0
BcaC05g29913 Brassica carinata HOM05D008965 ORTHO05D011533 4.5e-42 174.1 84 100.0
BolC5t34910H Brassica oleracea HOM05D008965 ORTHO05D011533 4.5e-42 174.1 84 100.0
C05p62550 Brassica napus HOM05D008965 ORTHO05D011533 5.0e-41 170.6 83 98.8
A05p42840 Brassica napus HOM05D008965 ORTHO05D011533 2.7e-34 148.3 84 85.7
BraA05t22969Z Brassica rapa HOM05D008965 ORTHO05D011533 3.5e-34 147.9 83 85.5
BolC5t34911H Brassica oleracea HOM05D008965 ORTHO05D011533 5.9e-34 147.1 84 85.7
BcaC05g29914 Brassica carinata HOM05D008965 ORTHO05D011533 1.7e-33 145.6 84 84.5
C05p62560 Brassica napus HOM05D008965 ORTHO05D011533 1.7e-33 145.6 84 84.5
C09p50450 Brassica napus HOM05D008965 ORTHO05D011533 3.0e-33 144.8 84 84.5
BolC9t57902H Brassica oleracea HOM05D008965 ORTHO05D011533 3.0e-33 144.8 84 84.5
BcaC05g30176 Brassica carinata HOM05D008965 ORTHO05D011533 4.0e-30 134.4 87 77.0
A05p42830 Brassica napus HOM05D008965 ORTHO05D011533 1.5e-29 132.5 87 78.2
BcaC05g30175 Brassica carinata HOM05D008965 ORTHO05D011533 2.2e-20 102.1 87 67.8
AL6G46040 Arabidopsis lyrata HOM05D008965 ORTHO05D011533 2.4e-14 82.0 79 53.2
AT4G11510 Arabidopsis thaliana HOM05D008965 ORTHO05D011533 2.2e-12 75.5 80 53.8
Carub.0006s3055 Capsella rubella HOM05D008965 ORTHO05D011533 8.4e-12 73.6 71 54.9
A08p28330 Brassica napus HOM05D008965 ORTHO05D027579 1.7e-09 65.9 77 48.1
BcaB03g11925 Brassica carinata HOM05D008965 ORTHO05D011533 2.3e-09 65.5 76 47.4
Carub.0006s3050 Capsella rubella HOM05D008965 ORTHO05D011533 5.1e-09 64.3 75 48.0
Thhalv10022213m.g Eutrema salsugineum HOM05D008965 ORTHO05D011533 8.7e-09 63.5 85 49.4
AL6G46060 Arabidopsis lyrata HOM05D008965 ORTHO05D011533 5.6e-08 60.8 50 56.0
Carub.0006s3053 Capsella rubella HOM05D008965 ORTHO05D011533 5.6e-08 60.8 80 47.5
Aa31sc41G90 Aethionema arabicum HOM05D008965 ORTHO05D011533 7.3e-08 60.5 71 50.7
Aa31sc17G30 Aethionema arabicum HOM05D008965 ORTHO05D011533 9.6e-08 60.1 71 49.3
AT3G04735 Arabidopsis thaliana HOM05D008965 ORTHO05D011533 1.2e-07 59.7 86 47.7
AL3G14860 Arabidopsis lyrata HOM05D008965 ORTHO05D011533 2.8e-07 58.5 80 48.8
AL1G36810 Arabidopsis lyrata HOM05D008965 ORTHO05D031329 2.4e-06 55.5 70 52.9
Carub.0001s2269 Capsella rubella HOM05D008965 ORTHO05D031329 3.1e-06 55.1 78 47.4
AT1G23147 Arabidopsis thaliana HOM05D008965 ORTHO05D011533 5.2e-06 54.3 88 42.0
C08p21750 Brassica napus HOM05D008965 ORTHO05D027579 6.9e-06 53.9 77 44.2
Carub.0006s3052 Capsella rubella HOM05D008965 ORTHO05D011533 9.0e-06 53.5 78 43.6


User provided reference genes

Program Settings