Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g29762 Brassica carinata HOM05D009579 ORTHO05D092626 1.8e-215 752.3 380 100.0
BcaC07g40975 Brassica carinata HOM05D009579 ORTHO05D014125 1.2e-73 281.2 223 68.6
C09p48550 Brassica napus HOM05D009579 ORTHO05D019922 6.4e-43 179.1 352 38.6
BcaB02g07818 Brassica carinata HOM05D009579 ORTHO05D091475 4.1e-42 176.4 127 73.2
BcaC02g09063 Brassica carinata HOM05D009579 ORTHO05D014125 7.8e-41 172.2 336 39.9
C02p11010 Brassica napus HOM05D009579 ORTHO05D019922 2.5e-39 167.2 320 39.4
BolC4t25373H Brassica oleracea HOM05D009579 ORTHO05D014125 6.8e-37 159.1 219 47.0
BcaB03g16517 Brassica carinata HOM05D009579 ORTHO05D014125 2.6e-36 157.1 217 46.5
A08p01540 Brassica napus HOM05D009579 ORTHO05D014125 3.8e-35 153.3 206 49.0
BolC3t12905H Brassica oleracea HOM05D009579 ORTHO05D014125 6.4e-35 152.5 219 45.7
BcaC04g21648 Brassica carinata HOM05D009579 ORTHO05D092920 2.3e-32 144.1 128 60.9
BcaC04g21647 Brassica carinata HOM05D034884 ORTHO05D039059 2.8e-30 137.1 138 60.1
C04p37990 Brassica napus HOM05D009579 ORTHO05D014125 1.8e-29 134.4 274 38.3
C09p29390 Brassica napus HOM05D034884 ORTHO05D039059 2.6e-28 130.6 138 58.0
BcaB01g04332 Brassica carinata HOM05D034884 ORTHO05D092501 1.1e-26 125.2 61 100.0
C09p62140 Brassica napus HOM05D009579 ORTHO05D021934 1.6e-25 121.3 278 34.9
BcaB07g33975 Brassica carinata HOM05D013189 ORTHO05D027648 4.6e-25 119.8 219 36.5
C07p08830 Brassica napus HOM05D009579 ORTHO05D021934 4.6e-25 119.8 102 59.8
C09p62210 Brassica napus HOM05D009579 ORTHO05D021934 4.6e-25 119.8 278 34.5
BolC7t41296H Brassica oleracea HOM05D009579 ORTHO05D021934 7.8e-25 119.0 289 32.9
C01p19990 Brassica napus HOM05D009579 ORTHO05D014125 7.3e-23 112.5 149 44.3
BolC9t53019H Brassica oleracea HOM05D009579 ORTHO05D014125 8.1e-22 109.0 140 47.1
BcaB01g03787 Brassica carinata HOM05D009579 ORTHO05D014125 2.4e-21 107.5 216 39.4
A04p29000 Brassica napus HOM05D013189 ORTHO05D027648 5.3e-21 106.3 112 50.9
A10p00120 Brassica napus HOM05D000174 ORTHO05D027648 5.3e-21 106.3 112 50.9
C09p00850 Brassica napus HOM05D009579 ORTHO05D014125 5.3e-21 106.3 140 46.4
BraA10t42291Z Brassica rapa HOM05D000174 ORTHO05D027648 5.3e-21 106.3 112 50.9
BolC3t19826H Brassica oleracea HOM05D008872 ORTHO05D032322 1.2e-20 105.1 353 33.4
C02p46890 Brassica napus HOM05D008872 ORTHO05D032322 3.4e-20 103.6 353 33.1
BolC3t14798H Brassica oleracea HOM05D009579 ORTHO05D014125 3.4e-20 103.6 140 45.7
BcaNung02292 Brassica carinata HOM05D000025 ORTHO05D000040 7.6e-20 102.4 299 34.4
C05p17110 Brassica napus HOM05D008872 ORTHO05D011322 7.9e-17 92.4 353 31.7
BcaC04g22210 Brassica carinata HOM05D008872 ORTHO05D011322 3.0e-16 90.5 333 32.4
A04p33690 Brassica napus HOM05D015039 ORTHO05D011322 1.5e-15 88.2 189 38.6
BolC5t28809H Brassica oleracea HOM05D015039 ORTHO05D011322 1.3e-14 85.1 188 37.2
C03p83110 Brassica napus HOM05D015039 ORTHO05D011322 1.1e-13 82.0 188 36.2
C07p53080 Brassica napus HOM05D013189 ORTHO05D032411 1.5e-12 78.2 238 32.4
BcaC02g07321 Brassica carinata HOM05D008872 ORTHO05D011322 3.4e-12 77.0 305 29.5
C03p03660 Brassica napus HOM05D009579 ORTHO05D014125 4.5e-12 76.6 232 30.6
BcaNung03192 Brassica carinata HOM05D013189 ORTHO05D032411 1.3e-11 75.1 262 30.2
BcaB03g16768 Brassica carinata HOM05D009579 ORTHO05D014125 2.2e-11 74.3 90 53.3
BolC7t43612H Brassica oleracea HOM05D008872 ORTHO05D011322 4.9e-11 73.2 160 41.2
BcaB04g20432 Brassica carinata HOM05D008872 ORTHO05D011322 6.5e-11 72.8 154 35.1
C08p52410 Brassica napus HOM05D008872 ORTHO05D011322 6.5e-11 72.8 160 41.9
BcaC01g00092 Brassica carinata HOM05D008872 ORTHO05D032322 1.9e-10 71.2 243 31.7
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 2.5e-10 70.9 158 33.5
BolC9t57697H Brassica oleracea HOM05D009579 ORTHO05D019922 2.7e-09 67.4 99 48.5
C06p02220 Brassica napus HOM05D008872 ORTHO05D011322 1.0e-08 65.5 150 38.7
BolC6t37523H Brassica oleracea HOM05D008872 ORTHO05D032631 1.3e-08 65.1 261 30.3
C09p62250 Brassica napus HOM05D008872 ORTHO05D011322 3.9e-08 63.5 150 37.3
BolC2t07171H Brassica oleracea HOM05D063622 ORTHO05D019922 5.1e-08 63.2 138 31.9
BcaC08g45935 Brassica carinata HOM05D008872 ORTHO05D039599 6.7e-08 62.8 159 37.7
BNapus_Darmor_BZH_scaffold_38p02020 Brassica napus HOM05D008872 ORTHO05D011322 6.7e-08 62.8 167 34.7
C06p37330 Brassica napus HOM05D008872 ORTHO05D039599 6.7e-08 62.8 159 37.7
BolC2t06990H Brassica oleracea HOM05D008872 ORTHO05D011322 6.7e-08 62.8 167 34.7
C03p17890 Brassica napus HOM05D008872 ORTHO05D011322 8.7e-08 62.4 149 38.9
C05p01530 Brassica napus HOM05D008872 ORTHO05D011322 1.5e-07 61.6 152 39.5
BcaC05g30090 Brassica carinata HOM05D015039 ORTHO05D011322 3.3e-07 60.5 114 38.6
BcaC06g34166 Brassica carinata HOM05D008872 ORTHO05D039385 3.3e-07 60.5 152 38.8
C07p42690 Brassica napus HOM05D008872 ORTHO05D011322 5.7e-07 59.7 87 47.1
BcaC08g43114 Brassica carinata HOM05D015039 ORTHO05D011322 7.4e-07 59.3 114 37.7
C06p03870 Brassica napus HOM05D015039 ORTHO05D000276 7.4e-07 59.3 114 37.7
C06p23490 Brassica napus HOM05D008872 ORTHO05D032631 4.8e-06 56.6 126 38.9


User provided reference genes

Program Settings