Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 3.2e-159 566.2 664 100.0
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 3.2e-159 566.2 664 100.0
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 4.1e-154 549.3 664 98.5
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 2.6e-108 397.1 680 80.0
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 4.3e-103 379.8 718 77.2
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 6.5e-75 286.2 167 89.2
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 4.1e-69 266.9 175 80.6
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 1.3e-67 261.9 165 83.0
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 1.8e-64 251.5 175 77.7
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 3.9e-64 250.4 175 77.1
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 2.6e-63 247.7 153 85.0
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 1.4e-40 172.2 143 64.3
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 1.3e-30 139.0 108 61.1
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 3.7e-22 110.9 94 56.4
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 3.7e-22 110.9 106 53.8
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 8.3e-22 109.8 103 54.4
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 5.4e-21 107.1 97 54.6
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 9.2e-21 106.3 97 51.5
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 1.6e-20 105.5 84 57.1
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 1.6e-20 105.5 105 53.3
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 1.6e-20 105.5 105 51.4
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 2.0e-20 105.1 105 51.4
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 3.5e-20 104.4 102 52.0
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 3.5e-20 104.4 89 56.2
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 4.6e-20 104.0 106 53.8
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 6.0e-20 103.6 83 59.0
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 7.8e-20 103.2 105 51.4
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 1.0e-19 102.8 104 50.0
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 1.0e-19 102.8 106 50.9
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 1.0e-19 102.8 105 50.5
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 1.7e-19 102.1 96 50.0
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 2.3e-19 101.7 107 49.5
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 2.3e-19 101.7 134 45.5
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 3.0e-19 101.3 158 40.5
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 3.0e-19 101.3 83 60.2
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 5.0e-19 100.5 109 47.7
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 6.6e-19 100.1 164 37.8
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 6.6e-19 100.1 83 56.6
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 8.6e-19 99.8 102 49.0
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 1.1e-18 99.4 83 55.4
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 1.1e-18 99.4 110 46.4
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 1.9e-18 98.6 80 57.5
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 1.9e-18 98.6 106 51.9
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 2.5e-18 98.2 83 55.4
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 2.5e-18 98.2 146 41.8
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 2.5e-18 98.2 109 47.7
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 4.3e-18 97.4 82 58.5
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 5.6e-18 97.1 83 51.8
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 5.6e-18 97.1 83 51.8
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 5.6e-18 97.1 80 56.2
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 5.6e-18 97.1 153 41.2
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 5.6e-18 97.1 89 52.8
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 7.3e-18 96.7 109 48.6
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 9.5e-18 96.3 83 56.6
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 9.5e-18 96.3 85 52.9
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 1.2e-17 95.9 85 54.1
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.2e-17 95.9 85 52.9
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 1.2e-17 95.9 89 53.9
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 1.6e-17 95.5 128 43.0
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.6e-17 95.5 78 59.0
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 2.1e-17 95.1 83 51.8
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 2.1e-17 95.1 82 54.9
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 3.6e-17 94.4 80 52.5
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 4.7e-17 94.0 79 57.0
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 4.7e-17 94.0 83 53.0
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 4.7e-17 94.0 141 40.4
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 6.2e-17 93.6 132 42.4
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 8.1e-17 93.2 95 47.4
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 8.1e-17 93.2 83 53.0
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 8.1e-17 93.2 82 52.4
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 1.1e-16 92.8 91 50.5
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 1.4e-16 92.4 177 37.3
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 1.4e-16 92.4 79 55.7
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 1.8e-16 92.0 84 52.4
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.8e-16 92.0 107 46.7
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 2.3e-16 91.7 79 55.7
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 3.1e-16 91.3 128 42.2
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 3.1e-16 91.3 128 42.2
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 4.0e-16 90.9 79 54.4
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 5.2e-16 90.5 75 57.3
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 8.9e-16 89.7 81 54.3
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 8.9e-16 89.7 145 40.0
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 1.5e-15 89.0 125 42.4
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 3.4e-15 87.8 79 55.7
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 5.8e-15 87.0 95 49.5
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 9.9e-15 86.3 86 50.0
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.3e-14 85.9 91 46.2
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 3.7e-14 84.3 130 42.3
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 4.9e-14 84.0 91 45.1
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.9e-14 84.0 91 45.1
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.9e-14 84.0 91 45.1
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 6.4e-14 83.6 91 45.1
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 1.6e-12 79.0 99 43.4
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 3.5e-12 77.8 86 45.3
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 1.1e-10 72.8 104 41.3
AT3G11860 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 9.5e-10 69.7 114 41.2
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 1.6e-09 68.9 84 42.9
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 3.6e-09 67.8 79 45.6
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 1.7e-06 58.9 81 34.6
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 2.9e-06 58.2 64 43.8


User provided reference genes

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